RNA–Protein interactions for RNA: ENST00000486750.1

SP140-211, Transcript of SP140 nuclear body protein, humanhuman

TSL 5

Gene SP140, Length 537 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-211ENST00000486750 ANKRD50Q9ULJ7 1429 aa20.48■□□□□ 0.87
SP140-211ENST00000486750 CHGAP10645 457 aaKnown RBP20.47■□□□□ 0.87
SP140-211ENST00000486750 KCNA6P17658 529 aa20.45■□□□□ 0.86
SP140-211ENST00000486750 ITGAEP38570 1179 aa20.45■□□□□ 0.86
SP140-211ENST00000486750 E9PCH4 1651 aa20.45■□□□□ 0.86
SP140-211ENST00000486750 RGS17Q9UGC6 210 aaPredicted RBP20.44■□□□□ 0.86
SP140-211ENST00000486750 NWD1Q149M9 1564 aa20.43■□□□□ 0.86
SP140-211ENST00000486750 TMEM131LA2VDJ0 1609 aa20.43■□□□□ 0.86
SP140-211ENST00000486750 CHD2O14647 1828 aaKnown RBP20.43■□□□□ 0.86
SP140-211ENST00000486750 RIMS2Q9UQ26 1411 aa20.43■□□□□ 0.86
SP140-211ENST00000486750 PPP1R15AO75807 674 aaPredicted RBP20.42■□□□□ 0.86
SP140-211ENST00000486750 UNC13BO14795 1591 aa20.42■□□□□ 0.86
SP140-211ENST00000486750 ZFYVE9O95405 1425 aa20.41■□□□□ 0.86
SP140-211ENST00000486750 PHLPP1O60346 1717 aa20.39■□□□□ 0.86
SP140-211ENST00000486750 FAM135BQ49AJ0 1406 aa20.39■□□□□ 0.85
SP140-211ENST00000486750 SLC52A1Q9NWF4 448 aa20.39■□□□□ 0.85
SP140-211ENST00000486750 NKTRP30414 1462 aaKnown RBP20.37■□□□□ 0.85
SP140-211ENST00000486750 RPRD2Q5VT52 1461 aaKnown RBP20.37■□□□□ 0.85
SP140-211ENST00000486750 SETD1AO15047 1707 aaKnown RBP20.36■□□□□ 0.85
SP140-211ENST00000486750 MSH6P52701 1360 aa20.35■□□□□ 0.85
SP140-211ENST00000486750 PLEKHG1Q9ULL1 1385 aa20.35■□□□□ 0.85
SP140-211ENST00000486750 POTEAQ6S8J7 498 aa20.35■□□□□ 0.85
SP140-211ENST00000486750 IQGAP3Q86VI3 1631 aa20.35■□□□□ 0.85
SP140-211ENST00000486750 C14orf37Q86TY3 774 aa20.33■□□□□ 0.85
SP140-211ENST00000486750 ADAMTS13Q76LX8 1427 aa20.3■□□□□ 0.84
SP140-211ENST00000486750 SLAIN2Q9P270 581 aa20.3■□□□□ 0.84
SP140-211ENST00000486750 NUP155O75694 1391 aa20.3■□□□□ 0.84
SP140-211ENST00000486750 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.3■□□□□ 0.84
SP140-211ENST00000486750 COL16A1Q07092 1604 aaPredicted RBP20.27■□□□□ 0.83
SP140-211ENST00000486750 SPHKAPQ2M3C7 1700 aa20.26■□□□□ 0.83
SP140-211ENST00000486750 PTPRUQ92729 1446 aa20.26■□□□□ 0.83
SP140-211ENST00000486750 ROCK1Q13464 1354 aa20.24■□□□□ 0.83
SP140-211ENST00000486750 TBX22Q9Y458 520 aa20.24■□□□□ 0.83
SP140-211ENST00000486750 HDGFP51858 240 aaKnown RBP20.23■□□□□ 0.83
SP140-211ENST00000486750 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.23■□□□□ 0.83
SP140-211ENST00000486750 NRXN3Q9Y4C0 1643 aa20.23■□□□□ 0.83
SP140-211ENST00000486750 LRP6O75581 1613 aa20.22■□□□□ 0.83
SP140-211ENST00000486750 DIP2AQ14689 1571 aa20.21■□□□□ 0.83
SP140-211ENST00000486750 TRPM2O94759 1503 aa20.21■□□□□ 0.83
SP140-211ENST00000486750 JCADQ9P266 1359 aa20.21■□□□□ 0.83
SP140-211ENST00000486750 ZNF326Q5BKZ1 582 aaKnown RBP20.2■□□□□ 0.82
SP140-211ENST00000486750 AMOTL2Q9Y2J4 779 aa20.2■□□□□ 0.82
SP140-211ENST00000486750 CLTCL1P53675 1640 aa20.18■□□□□ 0.82
SP140-211ENST00000486750 ATF3P18847 181 aa20.18■□□□□ 0.82
SP140-211ENST00000486750 MEX3CQ5U5Q3 659 aaKnown RBP20.17■□□□□ 0.82
SP140-211ENST00000486750 XRN1Q8IZH2 1706 aaKnown RBP20.16■□□□□ 0.82
SP140-211ENST00000486750 NUTM2BA6NNL0 878 aaPredicted RBP20.16■□□□□ 0.82
SP140-211ENST00000486750 NUTM2EB1AL46 878 aaPredicted RBP20.16■□□□□ 0.82
SP140-211ENST00000486750 NUTM2AQ8IVF1 878 aaPredicted RBP20.16■□□□□ 0.82
SP140-211ENST00000486750 AHDC1Q5TGY3 1603 aaPredicted RBP20.15■□□□□ 0.82
SP140-211ENST00000486750 DDX17Q92841 729 aaKnown RBP20.14■□□□□ 0.81
SP140-211ENST00000486750 C19orf44Q9H6X5 657 aa20.14■□□□□ 0.81
SP140-211ENST00000486750 SHPRHQ149N8 1683 aa20.13■□□□□ 0.81
SP140-211ENST00000486750 METP08581 1390 aa20.13■□□□□ 0.81
SP140-211ENST00000486750 BRINP3Q76B58 766 aa20.13■□□□□ 0.81
SP140-211ENST00000486750 CADPS2Q86UW7 1296 aa20.13■□□□□ 0.81
SP140-211ENST00000486750 TRIM52Q96A61 297 aa20.13■□□□□ 0.81
SP140-211ENST00000486750 KIF1BO60333 1816 aa20.12■□□□□ 0.81
SP140-211ENST00000486750 SETBP1Q9Y6X0 1596 aa20.12■□□□□ 0.81
SP140-211ENST00000486750 PIK3R4Q99570 1358 aa20.11■□□□□ 0.81
SP140-211ENST00000486750 NALCNQ8IZF0 1738 aa20.11■□□□□ 0.81
SP140-211ENST00000486750 NCOA3Q9Y6Q9 1424 aa20.1■□□□□ 0.81
SP140-211ENST00000486750 NEXMIFQ5QGS0 1516 aa20.1■□□□□ 0.81
SP140-211ENST00000486750 ASXL1Q8IXJ9 1541 aa20.1■□□□□ 0.81
SP140-211ENST00000486750 MST1RQ04912 1400 aa20.07■□□□□ 0.8
SP140-211ENST00000486750 NHSL1Q5SYE7 1610 aa20.05■□□□□ 0.8
SP140-211ENST00000486750 SPATA31A6Q5VVP1 1343 aa20.05■□□□□ 0.8
SP140-211ENST00000486750 NAIPQ13075 1403 aa20.04■□□□□ 0.8
SP140-211ENST00000486750 DCCP43146 1447 aa20.01■□□□□ 0.79
SP140-211ENST00000486750 ADGRL3Q9HAR2 1447 aa20.01■□□□□ 0.79
SP140-211ENST00000486750 RRBP1Q9P2E9 1410 aaKnown RBP20.01■□□□□ 0.79
SP140-211ENST00000486750 FOXD1Q16676 465 aa20■□□□□ 0.79
SP140-211ENST00000486750 AFF2P51816 1311 aa20■□□□□ 0.79
SP140-211ENST00000486750 ZNF772Q68DY9 489 aaPredicted RBP19.98■□□□□ 0.79
SP140-211ENST00000486750 C8orf37Q96NL8 207 aa19.98■□□□□ 0.79
SP140-211ENST00000486750 PPLO60437 1756 aa19.98■□□□□ 0.79
SP140-211ENST00000486750 ROBO2Q9HCK4 1378 aa19.96■□□□□ 0.79
SP140-211ENST00000486750 PNPLA6Q8IY17 1366 aa19.95■□□□□ 0.79
SP140-211ENST00000486750 SETD5Q9C0A6 1442 aa19.95■□□□□ 0.78
SP140-211ENST00000486750 RXRBP28702 533 aa19.95■□□□□ 0.78
SP140-211ENST00000486750 UPF1Q92900 1129 aaKnown RBP eCLIP19.95■□□□□ 0.78
SP140-211ENST00000486750 ORAI2Q96SN7 254 aa19.95■□□□□ 0.78
SP140-211ENST00000486750 C1orf167Q5SNV9 1468 aa19.94■□□□□ 0.78
SP140-211ENST00000486750 ADAMTS2O95450 1211 aa19.94■□□□□ 0.78
SP140-211ENST00000486750 SLC4A1APQ9BWU0 796 aaKnown RBP19.94■□□□□ 0.78
SP140-211ENST00000486750 LRRC59Q96AG4 307 aaKnown RBP19.91■□□□□ 0.78
SP140-211ENST00000486750 NUTM2FA1L443 756 aa19.89■□□□□ 0.77
SP140-211ENST00000486750 HFM1A2PYH4 1435 aa19.89■□□□□ 0.77
SP140-211ENST00000486750 RGS12O14924 1447 aa19.88■□□□□ 0.77
SP140-211ENST00000486750 PTCH1Q13635 1447 aa19.88■□□□□ 0.77
SP140-211ENST00000486750 XPCQ01831 940 aaPredicted RBP19.88■□□□□ 0.77
SP140-211ENST00000486750 RGL3Q3MIN7 710 aa19.88■□□□□ 0.77
SP140-211ENST00000486750 VGFO15240 615 aaPredicted RBP19.87■□□□□ 0.77
SP140-211ENST00000486750 QTRT2Q9H974 415 aaKnown RBP19.87■□□□□ 0.77
SP140-211ENST00000486750 STK26Q9P289 416 aa19.87■□□□□ 0.77
SP140-211ENST00000486750 ADGRF5Q8IZF2 1346 aa19.86■□□□□ 0.77
SP140-211ENST00000486750 NGLY1Q96IV0 654 aa19.86■□□□□ 0.77
SP140-211ENST00000486750 IFT172Q9UG01 1749 aa19.83■□□□□ 0.77
SP140-211ENST00000486750 LAMC1P11047 1609 aa19.83■□□□□ 0.76
SP140-211ENST00000486750 TMEM132EQ6IEE7 984 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms