RNA–Protein interactions for RNA: ENST00000486733.2

RPS4X-204, Transcript of ribosomal protein S4 X-linked, humanhuman

TSL 5

Gene RPS4X, Length 1,820 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4X-204ENST00000486733 ZFYVE9O95405 1425 aa11.44□□□□□ -0.58
RPS4X-204ENST00000486733 POLR1AO95602 1720 aaPredicted RBP11.44□□□□□ -0.58
RPS4X-204ENST00000486733 IDI1Q13907 227 aa11.43□□□□□ -0.58
RPS4X-204ENST00000486733 FBXO31Q5XUX0 539 aaPredicted RBP11.43□□□□□ -0.58
RPS4X-204ENST00000486733 ESF1Q9H501 851 aaKnown RBP11.43□□□□□ -0.58
RPS4X-204ENST00000486733 IQGAP1P46940 1657 aa11.42□□□□□ -0.58
RPS4X-204ENST00000486733 PIK3C2GO75747 1445 aa11.42□□□□□ -0.58
RPS4X-204ENST00000486733 NLRP1Q9C000 1473 aa11.42□□□□□ -0.58
RPS4X-204ENST00000486733 A2ML1A8K2U0 1454 aa11.41□□□□□ -0.58
RPS4X-204ENST00000486733 SETBP1Q9Y6X0 1596 aa11.41□□□□□ -0.58
RPS4X-204ENST00000486733 RIMS1Q86UR5 1692 aaKnown RBP11.41□□□□□ -0.58
RPS4X-204ENST00000486733 UBR1Q8IWV7 1749 aa11.41□□□□□ -0.58
RPS4X-204ENST00000486733 PPP4R3CPQ6ZMV5 832 aa11.41□□□□□ -0.58
RPS4X-204ENST00000486733 TNRQ92752 1358 aa11.41□□□□□ -0.58
RPS4X-204ENST00000486733 ROCK2O75116 1388 aaKnown RBP11.4□□□□□ -0.58
RPS4X-204ENST00000486733 EIF4G2P78344 907 aaKnown RBP eCLIP11.4□□□□□ -0.58
RPS4X-204ENST00000486733 KDM2AQ9Y2K7 1162 aa11.4□□□□□ -0.58
RPS4X-204ENST00000486733 USP47Q96K76 1375 aa11.4□□□□□ -0.59
RPS4X-204ENST00000486733 ZNF326Q5BKZ1 582 aaKnown RBP11.39□□□□□ -0.59
RPS4X-204ENST00000486733 MYO3AQ8NEV4 1616 aa11.39□□□□□ -0.59
RPS4X-204ENST00000486733 HSPA5P11021 654 aaKnown RBP11.38□□□□□ -0.59
RPS4X-204ENST00000486733 MAPK8IP2Q13387 824 aaPredicted RBP11.38□□□□□ -0.59
RPS4X-204ENST00000486733 ZNF142P52746 1687 aaPredicted RBP11.38□□□□□ -0.59
RPS4X-204ENST00000486733 ADGRF5Q8IZF2 1346 aa11.37□□□□□ -0.59
RPS4X-204ENST00000486733 ADGRB1O14514 1584 aa11.37□□□□□ -0.59
RPS4X-204ENST00000486733 CENPBP07199 599 aaPredicted RBP11.37□□□□□ -0.59
RPS4X-204ENST00000486733 SETD1AO15047 1707 aaKnown RBP11.36□□□□□ -0.59
RPS4X-204ENST00000486733 CARD11Q9BXL7 1154 aa11.36□□□□□ -0.59
RPS4X-204ENST00000486733 SCAF11Q99590 1463 aaKnown RBP11.35□□□□□ -0.59
RPS4X-204ENST00000486733 CHGAP10645 457 aaKnown RBP11.35□□□□□ -0.59
RPS4X-204ENST00000486733 NBPF1Q3BBV0 1214 aa11.35□□□□□ -0.59
RPS4X-204ENST00000486733 VGFO15240 615 aaPredicted RBP11.35□□□□□ -0.59
RPS4X-204ENST00000486733 SLIT1O75093 1534 aa11.34□□□□□ -0.59
RPS4X-204ENST00000486733 SETD1BQ9UPS6 1966 aaKnown RBP11.34□□□□□ -0.59
RPS4X-204ENST00000486733 NRXN3Q9Y4C0 1643 aa11.34□□□□□ -0.59
RPS4X-204ENST00000486733 ARHGAP23Q9P227 1491 aa11.34□□□□□ -0.59
RPS4X-204ENST00000486733 SCAF1Q9H7N4 1312 aaKnown RBP11.34□□□□□ -0.59
RPS4X-204ENST00000486733 CEP170BQ9Y4F5 1589 aaPredicted RBP11.33□□□□□ -0.6
RPS4X-204ENST00000486733 RIMS2Q9UQ26 1411 aa11.33□□□□□ -0.6
RPS4X-204ENST00000486733 C14orf93Q9H972 538 aaKnown RBP11.33□□□□□ -0.6
RPS4X-204ENST00000486733 ASXL1Q8IXJ9 1541 aa11.33□□□□□ -0.6
RPS4X-204ENST00000486733 TMEM2Q9UHN6 1383 aa11.32□□□□□ -0.6
RPS4X-204ENST00000486733 ALKQ9UM73 1620 aa11.31□□□□□ -0.6
RPS4X-204ENST00000486733 PTPRMP28827 1452 aa11.31□□□□□ -0.6
RPS4X-204ENST00000486733 CEBPAP49715 358 aaPredicted RBP11.31□□□□□ -0.6
RPS4X-204ENST00000486733 HIRIP3Q9BW71 556 aaPredicted RBP11.31□□□□□ -0.6
RPS4X-204ENST00000486733 ARHGEF28Q8N1W1 1705 aaKnown RBP11.31□□□□□ -0.6
RPS4X-204ENST00000486733 WASHC2AQ641Q2 1341 aa11.31□□□□□ -0.6
RPS4X-204ENST00000486733 CCDC7Q96M83 1385 aa11.3□□□□□ -0.6
RPS4X-204ENST00000486733 CFAP70Q5T0N1 1121 aa11.3□□□□□ -0.6
RPS4X-204ENST00000486733 EIF3AQ14152 1382 aaKnown RBP11.3□□□□□ -0.6
RPS4X-204ENST00000486733 STAG3Q9UJ98 1225 aa11.3□□□□□ -0.6
RPS4X-204ENST00000486733 SBNO2Q9Y2G9 1366 aa11.29□□□□□ -0.6
RPS4X-204ENST00000486733 MIER1Q8N108 512 aa11.29□□□□□ -0.6
RPS4X-204ENST00000486733 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.29□□□□□ -0.6
RPS4X-204ENST00000486733 ST20-MTHFSA0A0A6YYL1 179 aa11.28□□□□□ -0.6
RPS4X-204ENST00000486733 TESK2Q96S53 571 aa11.28□□□□□ -0.6
RPS4X-204ENST00000486733 C11orf95C9JLR9 678 aaPredicted RBP11.28□□□□□ -0.6
RPS4X-204ENST00000486733 KIF7Q2M1P5 1343 aa11.27□□□□□ -0.6
RPS4X-204ENST00000486733 KNDC1Q76NI1 1749 aa11.27□□□□□ -0.6
RPS4X-204ENST00000486733 QRICH2Q9H0J4 1663 aa11.26□□□□□ -0.61
RPS4X-204ENST00000486733 DLC1Q96QB1 1528 aa11.26□□□□□ -0.61
RPS4X-204ENST00000486733 DIP2AQ14689 1571 aa11.26□□□□□ -0.61
RPS4X-204ENST00000486733 PLEKHG1Q9ULL1 1385 aa11.26□□□□□ -0.61
RPS4X-204ENST00000486733 MED14O60244 1454 aa11.26□□□□□ -0.61
RPS4X-204ENST00000486733 HDGFP51858 240 aaKnown RBP11.25□□□□□ -0.61
RPS4X-204ENST00000486733 ADAMTS13Q76LX8 1427 aa11.25□□□□□ -0.61
RPS4X-204ENST00000486733 NUTM2DQ5VT03 806 aaPredicted RBP11.24□□□□□ -0.61
RPS4X-204ENST00000486733 YTHDC2Q9H6S0 1430 aaKnown RBP11.24□□□□□ -0.61
RPS4X-204ENST00000486733 THEMISQ8N1K5 641 aaPredicted RBP11.23□□□□□ -0.61
RPS4X-204ENST00000486733 DISP3Q9P2K9 1392 aa11.23□□□□□ -0.61
RPS4X-204ENST00000486733 TECPR2O15040 1411 aa11.23□□□□□ -0.61
RPS4X-204ENST00000486733 SLC24A1O60721 1099 aa11.23□□□□□ -0.61
RPS4X-204ENST00000486733 CPS1P31327 1500 aa11.23□□□□□ -0.61
RPS4X-204ENST00000486733 MYOM1P52179 1685 aa11.22□□□□□ -0.61
RPS4X-204ENST00000486733 DDX10Q13206 875 aaKnown RBP11.22□□□□□ -0.61
RPS4X-204ENST00000486733 LRPPRCP42704 1394 aaKnown RBP11.21□□□□□ -0.61
RPS4X-204ENST00000486733 LTKP29376 864 aa11.21□□□□□ -0.61
RPS4X-204ENST00000486733 ABCC11Q96J66 1382 aa11.21□□□□□ -0.62
RPS4X-204ENST00000486733 CENPJQ9HC77 1338 aaPredicted RBP11.21□□□□□ -0.62
RPS4X-204ENST00000486733 TMEM132EQ6IEE7 984 aa11.21□□□□□ -0.62
RPS4X-204ENST00000486733 TMF1P82094 1093 aa11.2□□□□□ -0.62
RPS4X-204ENST00000486733 YTHDC1Q96MU7 727 aaKnown RBP11.2□□□□□ -0.62
RPS4X-204ENST00000486733 EID1Q9Y6B2 187 aa11.19□□□□□ -0.62
RPS4X-204ENST00000486733 METP08581 1390 aa11.19□□□□□ -0.62
RPS4X-204ENST00000486733 TULP4Q9NRJ4 1543 aa11.19□□□□□ -0.62
RPS4X-204ENST00000486733 TXNDC2Q86VQ3 553 aa11.19□□□□□ -0.62
RPS4X-204ENST00000486733 XRN1Q8IZH2 1706 aaKnown RBP11.18□□□□□ -0.62
RPS4X-204ENST00000486733 FAM135BQ49AJ0 1406 aa11.18□□□□□ -0.62
RPS4X-204ENST00000486733 TRAK1Q9UPV9 953 aa11.18□□□□□ -0.62
RPS4X-204ENST00000486733 GTF3C3Q9Y5Q9 886 aa11.18□□□□□ -0.62
RPS4X-204ENST00000486733 CDCA8Q53HL2 280 aa11.17□□□□□ -0.62
RPS4X-204ENST00000486733 SIRT1Q96EB6 747 aa11.17□□□□□ -0.62
RPS4X-204ENST00000486733 PIK3R4Q99570 1358 aa11.17□□□□□ -0.62
RPS4X-204ENST00000486733 ADGRB2O60241 1585 aa11.16□□□□□ -0.62
RPS4X-204ENST00000486733 PTCH1Q13635 1447 aa11.16□□□□□ -0.62
RPS4X-204ENST00000486733 KDM4FA0A1W2PPD8 638 aa11.16□□□□□ -0.62
RPS4X-204ENST00000486733 PUS7Q96PZ0 661 aaKnown RBP11.16□□□□□ -0.62
RPS4X-204ENST00000486733 TBX22Q9Y458 520 aa11.16□□□□□ -0.62
RPS4X-204ENST00000486733 POTEDQ86YR6 584 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms