RNA–Protein interactions for RNA: ENST00000486502.1

TNFSF13B-204, Transcript of TNF superfamily member 13b, humanhuman

TSL 5

Gene TNFSF13B, Length 395 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-204ENST00000486502 KDM5AP29375 1690 aaKnown RBP24.25■■□□□ 1.47
TNFSF13B-204ENST00000486502 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.25■■□□□ 1.47
TNFSF13B-204ENST00000486502 RPRD2Q5VT52 1461 aaKnown RBP24.25■■□□□ 1.47
TNFSF13B-204ENST00000486502 ADGRB3O60242 1522 aa24.25■■□□□ 1.47
TNFSF13B-204ENST00000486502 TET3O43151 1660 aa24.24■■□□□ 1.47
TNFSF13B-204ENST00000486502 C14orf37Q86TY3 774 aa24.23■■□□□ 1.47
TNFSF13B-204ENST00000486502 FAM135BQ49AJ0 1406 aa24.23■■□□□ 1.47
TNFSF13B-204ENST00000486502 RIMS2Q9UQ26 1411 aa24.23■■□□□ 1.47
TNFSF13B-204ENST00000486502 XIRP1Q702N8 1843 aaKnown RBP24.22■■□□□ 1.47
TNFSF13B-204ENST00000486502 NUP155O75694 1391 aa24.21■■□□□ 1.47
TNFSF13B-204ENST00000486502 SLAIN2Q9P270 581 aa24.21■■□□□ 1.47
TNFSF13B-204ENST00000486502 MSH6P52701 1360 aa24.2■■□□□ 1.46
TNFSF13B-204ENST00000486502 TBX22Q9Y458 520 aa24.2■■□□□ 1.46
TNFSF13B-204ENST00000486502 PLEKHG1Q9ULL1 1385 aa24.19■■□□□ 1.46
TNFSF13B-204ENST00000486502 ROCK1Q13464 1354 aa24.18■■□□□ 1.46
TNFSF13B-204ENST00000486502 ZFYVE9O95405 1425 aa24.15■■□□□ 1.46
TNFSF13B-204ENST00000486502 MYO5BQ9ULV0 1848 aa24.14■■□□□ 1.45
TNFSF13B-204ENST00000486502 RGS17Q9UGC6 210 aaPredicted RBP24.13■■□□□ 1.45
TNFSF13B-204ENST00000486502 ZNF326Q5BKZ1 582 aaKnown RBP24.12■■□□□ 1.45
TNFSF13B-204ENST00000486502 NKTRP30414 1462 aaKnown RBP24.12■■□□□ 1.45
TNFSF13B-204ENST00000486502 GCC2Q8IWJ2 1684 aa24.11■■□□□ 1.45
TNFSF13B-204ENST00000486502 TMEM131LA2VDJ0 1609 aa24.1■■□□□ 1.45
TNFSF13B-204ENST00000486502 ATF3P18847 181 aa24.1■■□□□ 1.45
TNFSF13B-204ENST00000486502 UNC13BO14795 1591 aa24.1■■□□□ 1.45
TNFSF13B-204ENST00000486502 ROBO1Q9Y6N7 1651 aa24.08■■□□□ 1.45
TNFSF13B-204ENST00000486502 AMOTL2Q9Y2J4 779 aa24.08■■□□□ 1.45
TNFSF13B-204ENST00000486502 C19orf44Q9H6X5 657 aa24.07■■□□□ 1.44
TNFSF13B-204ENST00000486502 E9PCH4 1651 aa24.07■■□□□ 1.44
TNFSF13B-204ENST00000486502 CHD2O14647 1828 aaKnown RBP24.06■■□□□ 1.44
TNFSF13B-204ENST00000486502 NWD1Q149M9 1564 aa24.05■■□□□ 1.44
TNFSF13B-204ENST00000486502 CADPS2Q86UW7 1296 aa24.05■■□□□ 1.44
TNFSF13B-204ENST00000486502 POTEAQ6S8J7 498 aa24.04■■□□□ 1.44
TNFSF13B-204ENST00000486502 IQGAP3Q86VI3 1631 aa24.02■■□□□ 1.44
TNFSF13B-204ENST00000486502 ADAMTS13Q76LX8 1427 aa24.01■■□□□ 1.43
TNFSF13B-204ENST00000486502 PIK3R4Q99570 1358 aa24.01■■□□□ 1.43
TNFSF13B-204ENST00000486502 NCOA3Q9Y6Q9 1424 aa24.01■■□□□ 1.43
TNFSF13B-204ENST00000486502 JCADQ9P266 1359 aa24■■□□□ 1.43
TNFSF13B-204ENST00000486502 TRIM52Q96A61 297 aa23.99■■□□□ 1.43
TNFSF13B-204ENST00000486502 MEX3CQ5U5Q3 659 aaKnown RBP23.98■■□□□ 1.43
TNFSF13B-204ENST00000486502 PHLPP1O60346 1717 aa23.97■■□□□ 1.43
TNFSF13B-204ENST00000486502 TRPM2O94759 1503 aa23.93■■□□□ 1.42
TNFSF13B-204ENST00000486502 DIP2AQ14689 1571 aa23.92■■□□□ 1.42
TNFSF13B-204ENST00000486502 PTPRUQ92729 1446 aa23.92■■□□□ 1.42
TNFSF13B-204ENST00000486502 NUTM2BA6NNL0 878 aaPredicted RBP23.9■■□□□ 1.42
TNFSF13B-204ENST00000486502 NUTM2EB1AL46 878 aaPredicted RBP23.9■■□□□ 1.42
TNFSF13B-204ENST00000486502 BRINP3Q76B58 766 aa23.9■■□□□ 1.42
TNFSF13B-204ENST00000486502 NUTM2AQ8IVF1 878 aaPredicted RBP23.9■■□□□ 1.42
TNFSF13B-204ENST00000486502 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.89■■□□□ 1.41
TNFSF13B-204ENST00000486502 SPATA31A6Q5VVP1 1343 aa23.88■■□□□ 1.41
TNFSF13B-204ENST00000486502 METP08581 1390 aa23.87■■□□□ 1.41
TNFSF13B-204ENST00000486502 SLC4A1APQ9BWU0 796 aaKnown RBP23.86■■□□□ 1.41
TNFSF13B-204ENST00000486502 SPHKAPQ2M3C7 1700 aa23.86■■□□□ 1.41
TNFSF13B-204ENST00000486502 VGFO15240 615 aaPredicted RBP23.85■■□□□ 1.41
TNFSF13B-204ENST00000486502 ZNF772Q68DY9 489 aaPredicted RBP23.84■■□□□ 1.41
TNFSF13B-204ENST00000486502 NAIPQ13075 1403 aa23.83■■□□□ 1.4
TNFSF13B-204ENST00000486502 RRBP1Q9P2E9 1410 aaKnown RBP23.83■■□□□ 1.4
TNFSF13B-204ENST00000486502 COL16A1Q07092 1604 aaPredicted RBP23.81■■□□□ 1.4
TNFSF13B-204ENST00000486502 LRRC59Q96AG4 307 aaKnown RBP23.81■■□□□ 1.4
TNFSF13B-204ENST00000486502 SETBP1Q9Y6X0 1596 aa23.79■■□□□ 1.4
TNFSF13B-204ENST00000486502 DDX17Q92841 729 aaKnown RBP23.79■■□□□ 1.4
TNFSF13B-204ENST00000486502 CLTCL1P53675 1640 aa23.77■■□□□ 1.4
TNFSF13B-204ENST00000486502 DCCP43146 1447 aa23.76■■□□□ 1.39
TNFSF13B-204ENST00000486502 RPGRIP1LQ68CZ1 1315 aa23.76■■□□□ 1.39
TNFSF13B-204ENST00000486502 AHDC1Q5TGY3 1603 aaPredicted RBP23.76■■□□□ 1.39
TNFSF13B-204ENST00000486502 NRXN3Q9Y4C0 1643 aa23.76■■□□□ 1.39
TNFSF13B-204ENST00000486502 KIF1BO60333 1816 aa23.75■■□□□ 1.39
TNFSF13B-204ENST00000486502 LRP6O75581 1613 aa23.75■■□□□ 1.39
TNFSF13B-204ENST00000486502 RXRBP28702 533 aa23.75■■□□□ 1.39
TNFSF13B-204ENST00000486502 FOXD1Q16676 465 aa23.74■■□□□ 1.39
TNFSF13B-204ENST00000486502 MST1RQ04912 1400 aa23.74■■□□□ 1.39
TNFSF13B-204ENST00000486502 NEXMIFQ5QGS0 1516 aa23.73■■□□□ 1.39
TNFSF13B-204ENST00000486502 XRN1Q8IZH2 1706 aaKnown RBP23.72■■□□□ 1.39
TNFSF13B-204ENST00000486502 ADGRL3Q9HAR2 1447 aa23.71■■□□□ 1.39
TNFSF13B-204ENST00000486502 RGL3Q3MIN7 710 aa23.71■■□□□ 1.39
TNFSF13B-204ENST00000486502 ASXL1Q8IXJ9 1541 aa23.7■■□□□ 1.38
TNFSF13B-204ENST00000486502 HFM1A2PYH4 1435 aa23.7■■□□□ 1.38
TNFSF13B-204ENST00000486502 C8orf37Q96NL8 207 aa23.7■■□□□ 1.38
TNFSF13B-204ENST00000486502 AFF2P51816 1311 aa23.69■■□□□ 1.38
TNFSF13B-204ENST00000486502 SHPRHQ149N8 1683 aa23.68■■□□□ 1.38
TNFSF13B-204ENST00000486502 ORAI2Q96SN7 254 aa23.68■■□□□ 1.38
TNFSF13B-204ENST00000486502 SETD5Q9C0A6 1442 aa23.67■■□□□ 1.38
TNFSF13B-204ENST00000486502 ROBO2Q9HCK4 1378 aa23.66■■□□□ 1.38
TNFSF13B-204ENST00000486502 ADAMTS2O95450 1211 aa23.66■■□□□ 1.38
TNFSF13B-204ENST00000486502 NGLY1Q96IV0 654 aa23.66■■□□□ 1.38
TNFSF13B-204ENST00000486502 QTRT2Q9H974 415 aaKnown RBP23.66■■□□□ 1.38
TNFSF13B-204ENST00000486502 STK26Q9P289 416 aa23.66■■□□□ 1.38
TNFSF13B-204ENST00000486502 SETD1AO15047 1707 aaKnown RBP23.64■■□□□ 1.37
TNFSF13B-204ENST00000486502 C1orf167Q5SNV9 1468 aa23.63■■□□□ 1.37
TNFSF13B-204ENST00000486502 UPF1Q92900 1129 aaKnown RBP eCLIP23.63■■□□□ 1.37
TNFSF13B-204ENST00000486502 MPHOSPH9Q99550 1183 aa23.63■■□□□ 1.37
TNFSF13B-204ENST00000486502 ESCO1Q5FWF5 840 aa23.62■■□□□ 1.37
TNFSF13B-204ENST00000486502 PNPLA6Q8IY17 1366 aa23.61■■□□□ 1.37
TNFSF13B-204ENST00000486502 ADGRF5Q8IZF2 1346 aa23.6■■□□□ 1.37
TNFSF13B-204ENST00000486502 PTCH1Q13635 1447 aa23.59■■□□□ 1.37
TNFSF13B-204ENST00000486502 NALCNQ8IZF0 1738 aa23.59■■□□□ 1.37
TNFSF13B-204ENST00000486502 CCDC144AA2RUR9 1427 aa23.59■■□□□ 1.37
TNFSF13B-204ENST00000486502 NUTM2FA1L443 756 aa23.58■■□□□ 1.37
TNFSF13B-204ENST00000486502 RBM6P78332 1123 aaKnown RBP23.58■■□□□ 1.37
TNFSF13B-204ENST00000486502 NHSL1Q5SYE7 1610 aa23.58■■□□□ 1.36
TNFSF13B-204ENST00000486502 TMEM132EQ6IEE7 984 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms