RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 SLC24A1O60721 1099 aa16.5■□□□□ 0.23
PKP4-213ENST00000486254 NBPF1Q3BBV0 1214 aa16.5■□□□□ 0.23
PKP4-213ENST00000486254 GTF3C3Q9Y5Q9 886 aa16.5■□□□□ 0.23
PKP4-213ENST00000486254 SIGLEC1Q9BZZ2 1709 aa16.5■□□□□ 0.23
PKP4-213ENST00000486254 EIF3AQ14152 1382 aaKnown RBP16.49■□□□□ 0.23
PKP4-213ENST00000486254 TESK2Q96S53 571 aa16.49■□□□□ 0.23
PKP4-213ENST00000486254 ARHGEF40Q8TER5 1519 aa16.49■□□□□ 0.23
PKP4-213ENST00000486254 WASHC2CQ9Y4E1 1318 aa16.48■□□□□ 0.23
PKP4-213ENST00000486254 MYO3AQ8NEV4 1616 aa16.48■□□□□ 0.23
PKP4-213ENST00000486254 SYNMO15061 1565 aa16.48■□□□□ 0.23
PKP4-213ENST00000486254 TSPOAP1O95153 1857 aa16.47■□□□□ 0.23
PKP4-213ENST00000486254 SBNO2Q9Y2G9 1366 aa16.45■□□□□ 0.22
PKP4-213ENST00000486254 PREX1Q8TCU6 1659 aa16.45■□□□□ 0.22
PKP4-213ENST00000486254 GGT6Q6P531 493 aa16.45■□□□□ 0.22
PKP4-213ENST00000486254 PIK3C2GO75747 1445 aa16.45■□□□□ 0.22
PKP4-213ENST00000486254 ZFYVE9O95405 1425 aa16.44■□□□□ 0.22
PKP4-213ENST00000486254 TMF1P82094 1093 aa16.43■□□□□ 0.22
PKP4-213ENST00000486254 CDCA8Q53HL2 280 aa16.42■□□□□ 0.22
PKP4-213ENST00000486254 SLC52A1Q9NWF4 448 aa16.42■□□□□ 0.22
PKP4-213ENST00000486254 DISP3Q9P2K9 1392 aa16.41■□□□□ 0.22
PKP4-213ENST00000486254 NEXMIFQ5QGS0 1516 aa16.41■□□□□ 0.22
PKP4-213ENST00000486254 RALBP1Q15311 655 aa16.4■□□□□ 0.22
PKP4-213ENST00000486254 ADGRB1O14514 1584 aa16.39■□□□□ 0.21
PKP4-213ENST00000486254 CFAP65Q6ZU64 1925 aaKnown RBP16.39■□□□□ 0.21
PKP4-213ENST00000486254 TMEM131LA2VDJ0 1609 aa16.37■□□□□ 0.21
PKP4-213ENST00000486254 ERVK-7P63135 1459 aa16.37■□□□□ 0.21
PKP4-213ENST00000486254 PARD3Q8TEW0 1356 aa16.37■□□□□ 0.21
PKP4-213ENST00000486254 SPATA31D1Q6ZQQ2 1576 aa16.37■□□□□ 0.21
PKP4-213ENST00000486254 KDM5AP29375 1690 aaKnown RBP16.37■□□□□ 0.21
PKP4-213ENST00000486254 ADGRF5Q8IZF2 1346 aa16.37■□□□□ 0.21
PKP4-213ENST00000486254 BRD4O60885 1362 aaPredicted RBP16.36■□□□□ 0.21
PKP4-213ENST00000486254 MRS2Q9HD23 443 aa16.36■□□□□ 0.21
PKP4-213ENST00000486254 PER1O15534 1290 aaPredicted RBP16.35■□□□□ 0.21
PKP4-213ENST00000486254 MYOM1P52179 1685 aa16.35■□□□□ 0.21
PKP4-213ENST00000486254 C14orf93Q9H972 538 aaKnown RBP16.34■□□□□ 0.21
PKP4-213ENST00000486254 MYBBP1AQ9BQG0 1328 aaKnown RBP16.34■□□□□ 0.21
PKP4-213ENST00000486254 INSRP06213 1382 aa16.33■□□□□ 0.21
PKP4-213ENST00000486254 NPC1L1Q9UHC9 1359 aa16.33■□□□□ 0.21
PKP4-213ENST00000486254 VGFO15240 615 aaPredicted RBP16.32■□□□□ 0.2
PKP4-213ENST00000486254 CLTCQ00610 1675 aaKnown RBP16.32■□□□□ 0.2
PKP4-213ENST00000486254 CFAP70Q5T0N1 1121 aa16.31■□□□□ 0.2
PKP4-213ENST00000486254 POLR3GLQ9BT43 218 aa16.31■□□□□ 0.2
PKP4-213ENST00000486254 ZBED9Q6R2W3 1325 aa16.3■□□□□ 0.2
PKP4-213ENST00000486254 CCDC184Q52MB2 194 aa16.3■□□□□ 0.2
PKP4-213ENST00000486254 LRPPRCP42704 1394 aaKnown RBP16.29■□□□□ 0.2
PKP4-213ENST00000486254 MYO5BQ9ULV0 1848 aa16.29■□□□□ 0.2
PKP4-213ENST00000486254 QRICH2Q9H0J4 1663 aa16.28■□□□□ 0.2
PKP4-213ENST00000486254 HNRNPUQ00839 825 aaKnown RBP eCLIP16.28■□□□□ 0.2
PKP4-213ENST00000486254 IDI1Q13907 227 aa16.28■□□□□ 0.2
PKP4-213ENST00000486254 NLRP13Q86W25 1043 aa16.28■□□□□ 0.2
PKP4-213ENST00000486254 PUS7Q96PZ0 661 aaKnown RBP16.28■□□□□ 0.2
PKP4-213ENST00000486254 ARHGEF28Q8N1W1 1705 aaKnown RBP16.27■□□□□ 0.2
PKP4-213ENST00000486254 ASXL1Q8IXJ9 1541 aa16.26■□□□□ 0.19
PKP4-213ENST00000486254 CENPJQ9HC77 1338 aaPredicted RBP16.25■□□□□ 0.19
PKP4-213ENST00000486254 CHGAP10645 457 aaKnown RBP16.25■□□□□ 0.19
PKP4-213ENST00000486254 PANK3Q9H999 370 aa16.25■□□□□ 0.19
PKP4-213ENST00000486254 PNISRQ8TF01 805 aaKnown RBP16.24■□□□□ 0.19
PKP4-213ENST00000486254 TMC1Q8TDI8 760 aa16.22■□□□□ 0.19
PKP4-213ENST00000486254 USP32Q8NFA0 1604 aa16.22■□□□□ 0.19
PKP4-213ENST00000486254 A2ML1A8K2U0 1454 aa16.22■□□□□ 0.19
PKP4-213ENST00000486254 FAM9BQ8IZU0 186 aa16.2■□□□□ 0.18
PKP4-213ENST00000486254 AMER1Q5JTC6 1135 aaPredicted RBP16.19■□□□□ 0.18
PKP4-213ENST00000486254 KNSTRNQ9Y448 316 aa16.19■□□□□ 0.18
PKP4-213ENST00000486254 DLC1Q96QB1 1528 aa16.19■□□□□ 0.18
PKP4-213ENST00000486254 NINLQ9Y2I6 1382 aa16.18■□□□□ 0.18
PKP4-213ENST00000486254 SUPT16HQ9Y5B9 1047 aaKnown RBP16.18■□□□□ 0.18
PKP4-213ENST00000486254 ALKQ9UM73 1620 aa16.18■□□□□ 0.18
PKP4-213ENST00000486254 SETD1AO15047 1707 aaKnown RBP16.17■□□□□ 0.18
PKP4-213ENST00000486254 ZMYM3Q14202 1370 aa16.16■□□□□ 0.18
PKP4-213ENST00000486254 FBXO31Q5XUX0 539 aaPredicted RBP16.16■□□□□ 0.18
PKP4-213ENST00000486254 PTPRMP28827 1452 aa16.16■□□□□ 0.18
PKP4-213ENST00000486254 TULP4Q9NRJ4 1543 aa16.16■□□□□ 0.18
PKP4-213ENST00000486254 BLMP54132 1417 aaPredicted RBP16.14■□□□□ 0.18
PKP4-213ENST00000486254 SMG6Q86US8 1419 aaKnown RBP16.14■□□□□ 0.18
PKP4-213ENST00000486254 NEFLP07196 543 aa16.14■□□□□ 0.17
PKP4-213ENST00000486254 YTHDC2Q9H6S0 1430 aaKnown RBP16.14■□□□□ 0.17
PKP4-213ENST00000486254 RIMS2Q9UQ26 1411 aa16.14■□□□□ 0.17
PKP4-213ENST00000486254 NLRP1Q9C000 1473 aa16.13■□□□□ 0.17
PKP4-213ENST00000486254 ERICH6BQ5W0A0 696 aa16.13■□□□□ 0.17
PKP4-213ENST00000486254 EVC2Q86UK5 1308 aa16.12■□□□□ 0.17
PKP4-213ENST00000486254 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.12■□□□□ 0.17
PKP4-213ENST00000486254 ESF1Q9H501 851 aaKnown RBP16.12■□□□□ 0.17
PKP4-213ENST00000486254 TRAK1Q9UPV9 953 aa16.12■□□□□ 0.17
PKP4-213ENST00000486254 TNRQ92752 1358 aa16.12■□□□□ 0.17
PKP4-213ENST00000486254 NRXN3Q9Y4C0 1643 aa16.11■□□□□ 0.17
PKP4-213ENST00000486254 KNDC1Q76NI1 1749 aa16.11■□□□□ 0.17
PKP4-213ENST00000486254 UBR1Q8IWV7 1749 aa16.11■□□□□ 0.17
PKP4-213ENST00000486254 NSD2O96028 1365 aa16.09■□□□□ 0.17
PKP4-213ENST00000486254 CC2D1BQ5T0F9 858 aaKnown RBP16.09■□□□□ 0.17
PKP4-213ENST00000486254 TMEM132EQ6IEE7 984 aa16.09■□□□□ 0.17
PKP4-213ENST00000486254 ATAD2Q6PL18 1390 aa16.09■□□□□ 0.17
PKP4-213ENST00000486254 STAG3Q9UJ98 1225 aa16.09■□□□□ 0.17
PKP4-213ENST00000486254 TECPR2O15040 1411 aa16.08■□□□□ 0.16
PKP4-213ENST00000486254 ANKRD36BQ8N2N9 1353 aa16.08■□□□□ 0.16
PKP4-213ENST00000486254 ABCC11Q96J66 1382 aa16.08■□□□□ 0.16
PKP4-213ENST00000486254 HDGFP51858 240 aaKnown RBP16.08■□□□□ 0.16
PKP4-213ENST00000486254 PPP2R1AP30153 589 aa16.07■□□□□ 0.16
PKP4-213ENST00000486254 PDE3BQ13370 1112 aa16.06■□□□□ 0.16
PKP4-213ENST00000486254 PELP1Q8IZL8 1130 aaKnown RBP16.06■□□□□ 0.16
PKP4-213ENST00000486254 CARD14Q9BXL6 1004 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms