RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 CHGAP10645 457 aaKnown RBP13.45□□□□□ -0.26
CTSA-208ENST00000485627 EIF4G2P78344 907 aaKnown RBP eCLIP13.45□□□□□ -0.26
CTSA-208ENST00000485627 CAMSAP1Q5T5Y3 1602 aa13.45□□□□□ -0.26
CTSA-208ENST00000485627 CLTCL1P53675 1640 aa13.43□□□□□ -0.26
CTSA-208ENST00000485627 HSPA1LP34931 641 aa13.43□□□□□ -0.26
CTSA-208ENST00000485627 SPATA31E1Q6ZUB1 1445 aa13.43□□□□□ -0.26
CTSA-208ENST00000485627 NOS1P29475 1434 aa13.41□□□□□ -0.26
CTSA-208ENST00000485627 HSPA5P11021 654 aaKnown RBP13.41□□□□□ -0.26
CTSA-208ENST00000485627 PIP4K2BP78356 416 aa13.41□□□□□ -0.26
CTSA-208ENST00000485627 SLC52A1Q9NWF4 448 aa13.41□□□□□ -0.26
CTSA-208ENST00000485627 MED1Q15648 1581 aaPredicted RBP13.41□□□□□ -0.26
CTSA-208ENST00000485627 HIRIP3Q9BW71 556 aaPredicted RBP13.4□□□□□ -0.26
CTSA-208ENST00000485627 CARD11Q9BXL7 1154 aa13.4□□□□□ -0.26
CTSA-208ENST00000485627 RALGAPBQ86X10 1494 aa13.39□□□□□ -0.27
CTSA-208ENST00000485627 NEURL4Q96JN8 1562 aa13.39□□□□□ -0.27
CTSA-208ENST00000485627 PRAG1Q86YV5 1406 aa13.39□□□□□ -0.27
CTSA-208ENST00000485627 UGGT1Q9NYU2 1555 aa13.38□□□□□ -0.27
CTSA-208ENST00000485627 ROCK2O75116 1388 aaKnown RBP13.38□□□□□ -0.27
CTSA-208ENST00000485627 KIF1BO60333 1816 aa13.38□□□□□ -0.27
CTSA-208ENST00000485627 CFAP65Q6ZU64 1925 aaKnown RBP13.37□□□□□ -0.27
CTSA-208ENST00000485627 CLTCQ00610 1675 aaKnown RBP13.37□□□□□ -0.27
CTSA-208ENST00000485627 RPGRIP1LQ68CZ1 1315 aa13.37□□□□□ -0.27
CTSA-208ENST00000485627 ZMYM3Q14202 1370 aa13.36□□□□□ -0.27
CTSA-208ENST00000485627 FBXO31Q5XUX0 539 aaPredicted RBP13.36□□□□□ -0.27
CTSA-208ENST00000485627 STAG3Q9UJ98 1225 aa13.36□□□□□ -0.27
CTSA-208ENST00000485627 ERVK-7P63135 1459 aa13.36□□□□□ -0.27
CTSA-208ENST00000485627 IDI1Q13907 227 aa13.35□□□□□ -0.27
CTSA-208ENST00000485627 FOXD4L1Q9NU39 408 aa13.35□□□□□ -0.27
CTSA-208ENST00000485627 ADGRB3O60242 1522 aa13.34□□□□□ -0.27
CTSA-208ENST00000485627 USP47Q96K76 1375 aa13.34□□□□□ -0.27
CTSA-208ENST00000485627 SYNMO15061 1565 aa13.34□□□□□ -0.27
CTSA-208ENST00000485627 RNF216Q9NWF9 866 aaPredicted RBP13.33□□□□□ -0.28
CTSA-208ENST00000485627 MYOM2P54296 1465 aa13.32□□□□□ -0.28
CTSA-208ENST00000485627 PIK3C2BO00750 1634 aa13.31□□□□□ -0.28
CTSA-208ENST00000485627 MYO3AQ8NEV4 1616 aa13.31□□□□□ -0.28
CTSA-208ENST00000485627 VGFO15240 615 aaPredicted RBP13.31□□□□□ -0.28
CTSA-208ENST00000485627 NBPF1Q3BBV0 1214 aa13.31□□□□□ -0.28
CTSA-208ENST00000485627 CEP170BQ9Y4F5 1589 aaPredicted RBP13.3□□□□□ -0.28
CTSA-208ENST00000485627 DDX10Q13206 875 aaKnown RBP13.3□□□□□ -0.28
CTSA-208ENST00000485627 TRPM1Q7Z4N2 1603 aa13.3□□□□□ -0.28
CTSA-208ENST00000485627 GPRASP1Q5JY77 1395 aa13.3□□□□□ -0.28
CTSA-208ENST00000485627 MROH2AA6NES4 1674 aa13.29□□□□□ -0.28
CTSA-208ENST00000485627 ADGRF5Q8IZF2 1346 aa13.29□□□□□ -0.28
CTSA-208ENST00000485627 TNRQ92752 1358 aa13.29□□□□□ -0.28
CTSA-208ENST00000485627 ZNF142P52746 1687 aaPredicted RBP13.28□□□□□ -0.28
CTSA-208ENST00000485627 ST20-MTHFSA0A0A6YYL1 179 aa13.27□□□□□ -0.29
CTSA-208ENST00000485627 LAMC1P11047 1609 aa13.26□□□□□ -0.29
CTSA-208ENST00000485627 HDGFP51858 240 aaKnown RBP13.26□□□□□ -0.29
CTSA-208ENST00000485627 CFAP70Q5T0N1 1121 aa13.26□□□□□ -0.29
CTSA-208ENST00000485627 ALKQ9UM73 1620 aa13.25□□□□□ -0.29
CTSA-208ENST00000485627 EIF3AQ14152 1382 aaKnown RBP13.25□□□□□ -0.29
CTSA-208ENST00000485627 TOM1O60784 492 aa13.25□□□□□ -0.29
CTSA-208ENST00000485627 NRXN1Q9ULB1 1477 aa13.24□□□□□ -0.29
CTSA-208ENST00000485627 CCDC7Q96M83 1385 aa13.24□□□□□ -0.29
CTSA-208ENST00000485627 WASHC2AQ641Q2 1341 aa13.24□□□□□ -0.29
CTSA-208ENST00000485627 NUTM2DQ5VT03 806 aaPredicted RBP13.24□□□□□ -0.29
CTSA-208ENST00000485627 POLR3GLQ9BT43 218 aa13.24□□□□□ -0.29
CTSA-208ENST00000485627 PPLO60437 1756 aa13.24□□□□□ -0.29
CTSA-208ENST00000485627 IFT172Q9UG01 1749 aa13.24□□□□□ -0.29
CTSA-208ENST00000485627 TMEM131LA2VDJ0 1609 aa13.24□□□□□ -0.29
CTSA-208ENST00000485627 ZFYVE9O95405 1425 aa13.23□□□□□ -0.29
CTSA-208ENST00000485627 KIAA1210Q9ULL0 1709 aa13.23□□□□□ -0.29
CTSA-208ENST00000485627 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.23□□□□□ -0.29
CTSA-208ENST00000485627 C14orf93Q9H972 538 aaKnown RBP13.23□□□□□ -0.29
CTSA-208ENST00000485627 NEXMIFQ5QGS0 1516 aa13.23□□□□□ -0.29
CTSA-208ENST00000485627 SCAF11Q99590 1463 aaKnown RBP13.23□□□□□ -0.29
CTSA-208ENST00000485627 PIK3C2GO75747 1445 aa13.22□□□□□ -0.29
CTSA-208ENST00000485627 KIF7Q2M1P5 1343 aa13.22□□□□□ -0.29
CTSA-208ENST00000485627 SLC24A1O60721 1099 aa13.22□□□□□ -0.29
CTSA-208ENST00000485627 MIER1Q8N108 512 aa13.22□□□□□ -0.29
CTSA-208ENST00000485627 RGS17Q9UGC6 210 aaPredicted RBP13.22□□□□□ -0.29
CTSA-208ENST00000485627 C11orf95C9JLR9 678 aaPredicted RBP13.21□□□□□ -0.29
CTSA-208ENST00000485627 A2ML1A8K2U0 1454 aa13.21□□□□□ -0.3
CTSA-208ENST00000485627 NLRP1Q9C000 1473 aa13.21□□□□□ -0.3
CTSA-208ENST00000485627 RIMS2Q9UQ26 1411 aa13.21□□□□□ -0.3
CTSA-208ENST00000485627 ANP32CO43423 234 aa13.2□□□□□ -0.3
CTSA-208ENST00000485627 TMF1P82094 1093 aa13.2□□□□□ -0.3
CTSA-208ENST00000485627 CPS1P31327 1500 aa13.19□□□□□ -0.3
CTSA-208ENST00000485627 SETBP1Q9Y6X0 1596 aa13.18□□□□□ -0.3
CTSA-208ENST00000485627 CDCA8Q53HL2 280 aa13.17□□□□□ -0.3
CTSA-208ENST00000485627 BCANQ96GW7 911 aa13.17□□□□□ -0.3
CTSA-208ENST00000485627 MYO5BQ9ULV0 1848 aa13.17□□□□□ -0.3
CTSA-208ENST00000485627 TMEM132EQ6IEE7 984 aa13.16□□□□□ -0.3
CTSA-208ENST00000485627 TESK2Q96S53 571 aa13.16□□□□□ -0.3
CTSA-208ENST00000485627 TRAK1Q9UPV9 953 aa13.16□□□□□ -0.3
CTSA-208ENST00000485627 EID1Q9Y6B2 187 aa13.16□□□□□ -0.3
CTSA-208ENST00000485627 POLR1AO95602 1720 aaPredicted RBP13.16□□□□□ -0.3
CTSA-208ENST00000485627 IQGAP1P46940 1657 aa13.15□□□□□ -0.3
CTSA-208ENST00000485627 THEMISQ8N1K5 641 aaPredicted RBP13.15□□□□□ -0.3
CTSA-208ENST00000485627 TMEM2Q9UHN6 1383 aa13.15□□□□□ -0.3
CTSA-208ENST00000485627 KDM5AP29375 1690 aaKnown RBP13.15□□□□□ -0.31
CTSA-208ENST00000485627 CENPJQ9HC77 1338 aaPredicted RBP13.13□□□□□ -0.31
CTSA-208ENST00000485627 STRCP1A6NGW2 1772 aa13.13□□□□□ -0.31
CTSA-208ENST00000485627 ANKLE2Q86XL3 938 aa13.13□□□□□ -0.31
CTSA-208ENST00000485627 NPHP4O75161 1426 aaPredicted RBP13.13□□□□□ -0.31
CTSA-208ENST00000485627 POTEAQ6S8J7 498 aa13.12□□□□□ -0.31
CTSA-208ENST00000485627 TXNDC2Q86VQ3 553 aa13.12□□□□□ -0.31
CTSA-208ENST00000485627 ADGRB1O14514 1584 aa13.11□□□□□ -0.31
CTSA-208ENST00000485627 STK26Q9P289 416 aa13.11□□□□□ -0.31
CTSA-208ENST00000485627 LRRC7Q96NW7 1537 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms