RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 NPM3O75607 178 aaKnown RBP16.5■□□□□ 0.23
HMGN1-215ENST00000485550 RRP7BPQ9NSQ0 103 aa16.5■□□□□ 0.23
HMGN1-215ENST00000485550 NWD1Q149M9 1564 aa16.5■□□□□ 0.23
HMGN1-215ENST00000485550 CHD2O14647 1828 aaKnown RBP16.49■□□□□ 0.23
HMGN1-215ENST00000485550 KIF15Q9NS87 1388 aa16.49■□□□□ 0.23
HMGN1-215ENST00000485550 IDI1Q13907 227 aa16.48■□□□□ 0.23
HMGN1-215ENST00000485550 CHIC2Q9UKJ5 165 aa16.48■□□□□ 0.23
HMGN1-215ENST00000485550 COL16A1Q07092 1604 aaPredicted RBP16.47■□□□□ 0.23
HMGN1-215ENST00000485550 MSH6P52701 1360 aa16.47■□□□□ 0.23
HMGN1-215ENST00000485550 JCADQ9P266 1359 aa16.47■□□□□ 0.23
HMGN1-215ENST00000485550 NKTRP30414 1462 aaKnown RBP16.47■□□□□ 0.23
HMGN1-215ENST00000485550 ERBINQ96RT1 1412 aa16.46■□□□□ 0.23
HMGN1-215ENST00000485550 C1QBPQ07021 282 aaKnown RBP16.46■□□□□ 0.23
HMGN1-215ENST00000485550 ABCC5O15440 1437 aa16.45■□□□□ 0.22
HMGN1-215ENST00000485550 BCANQ96GW7 911 aa16.45■□□□□ 0.22
HMGN1-215ENST00000485550 SLAIN2Q9P270 581 aa16.45■□□□□ 0.22
HMGN1-215ENST00000485550 LRP6O75581 1613 aa16.44■□□□□ 0.22
HMGN1-215ENST00000485550 ADGRB3O60242 1522 aa16.44■□□□□ 0.22
HMGN1-215ENST00000485550 KANK1Q14678 1352 aa16.43■□□□□ 0.22
HMGN1-215ENST00000485550 UPF1Q92900 1129 aaKnown RBP eCLIP16.43■□□□□ 0.22
HMGN1-215ENST00000485550 TRIM52Q96A61 297 aa16.43■□□□□ 0.22
HMGN1-215ENST00000485550 PTPN23Q9H3S7 1636 aa16.41■□□□□ 0.22
HMGN1-215ENST00000485550 GCC2Q8IWJ2 1684 aa16.41■□□□□ 0.22
HMGN1-215ENST00000485550 FAM50AQ14320 339 aaKnown RBP16.41■□□□□ 0.22
HMGN1-215ENST00000485550 MEX3CQ5U5Q3 659 aaKnown RBP16.41■□□□□ 0.22
HMGN1-215ENST00000485550 FGD6Q6ZV73 1430 aa16.41■□□□□ 0.22
HMGN1-215ENST00000485550 DAPK1P53355 1430 aa16.4■□□□□ 0.22
HMGN1-215ENST00000485550 SHPRHQ149N8 1683 aa16.4■□□□□ 0.22
HMGN1-215ENST00000485550 LMTK2Q8IWU2 1503 aa16.4■□□□□ 0.22
HMGN1-215ENST00000485550 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.39■□□□□ 0.21
HMGN1-215ENST00000485550 NOS1P29475 1434 aa16.38■□□□□ 0.21
HMGN1-215ENST00000485550 ZNF772Q68DY9 489 aaPredicted RBP16.37■□□□□ 0.21
HMGN1-215ENST00000485550 SPATA31A6Q5VVP1 1343 aa16.37■□□□□ 0.21
HMGN1-215ENST00000485550 ANKRD30AQ9BXX3 1397 aa16.36■□□□□ 0.21
HMGN1-215ENST00000485550 AHDC1Q5TGY3 1603 aaPredicted RBP16.35■□□□□ 0.21
HMGN1-215ENST00000485550 C14orf37Q86TY3 774 aa16.35■□□□□ 0.21
HMGN1-215ENST00000485550 PPP1R15AO75807 674 aaPredicted RBP16.34■□□□□ 0.21
HMGN1-215ENST00000485550 PLEKHG1Q9ULL1 1385 aa16.34■□□□□ 0.21
HMGN1-215ENST00000485550 ZFYVE9O95405 1425 aa16.34■□□□□ 0.21
HMGN1-215ENST00000485550 PPARGC1BQ86YN6 1023 aaKnown RBP16.33■□□□□ 0.2
HMGN1-215ENST00000485550 SLC52A1Q9NWF4 448 aa16.33■□□□□ 0.2
HMGN1-215ENST00000485550 RIMS2Q9UQ26 1411 aa16.33■□□□□ 0.2
HMGN1-215ENST00000485550 TMEM131LA2VDJ0 1609 aa16.32■□□□□ 0.2
HMGN1-215ENST00000485550 RXRBP28702 533 aa16.32■□□□□ 0.2
HMGN1-215ENST00000485550 NUTM2BA6NNL0 878 aaPredicted RBP16.31■□□□□ 0.2
HMGN1-215ENST00000485550 NUTM2EB1AL46 878 aaPredicted RBP16.31■□□□□ 0.2
HMGN1-215ENST00000485550 NUTM2AQ8IVF1 878 aaPredicted RBP16.31■□□□□ 0.2
HMGN1-215ENST00000485550 DIP2AQ14689 1571 aa16.3■□□□□ 0.2
HMGN1-215ENST00000485550 NUTM2DQ5VT03 806 aaPredicted RBP16.29■□□□□ 0.2
HMGN1-215ENST00000485550 NCOA3Q9Y6Q9 1424 aa16.28■□□□□ 0.2
HMGN1-215ENST00000485550 ATF3P18847 181 aa16.28■□□□□ 0.2
HMGN1-215ENST00000485550 KCNA4P22459 653 aa16.28■□□□□ 0.2
HMGN1-215ENST00000485550 CADPS2Q86UW7 1296 aa16.28■□□□□ 0.2
HMGN1-215ENST00000485550 TBX22Q9Y458 520 aa16.28■□□□□ 0.2
HMGN1-215ENST00000485550 AFF2P51816 1311 aa16.27■□□□□ 0.2
HMGN1-215ENST00000485550 CHGAP10645 457 aaKnown RBP16.27■□□□□ 0.2
HMGN1-215ENST00000485550 RPRD2Q5VT52 1461 aaKnown RBP16.27■□□□□ 0.19
HMGN1-215ENST00000485550 CDK12Q9NYV4 1490 aaPredicted RBP16.27■□□□□ 0.19
HMGN1-215ENST00000485550 ADAMTS13Q76LX8 1427 aa16.27■□□□□ 0.19
HMGN1-215ENST00000485550 ITGAEP38570 1179 aa16.26■□□□□ 0.19
HMGN1-215ENST00000485550 HDGFP51858 240 aaKnown RBP16.26■□□□□ 0.19
HMGN1-215ENST00000485550 C19orf44Q9H6X5 657 aa16.26■□□□□ 0.19
HMGN1-215ENST00000485550 BRINP3Q76B58 766 aa16.25■□□□□ 0.19
HMGN1-215ENST00000485550 NHSL1Q5SYE7 1610 aa16.24■□□□□ 0.19
HMGN1-215ENST00000485550 ANKRD50Q9ULJ7 1429 aa16.23■□□□□ 0.19
HMGN1-215ENST00000485550 E9PCH4 1651 aa16.23■□□□□ 0.19
HMGN1-215ENST00000485550 RGS12O14924 1447 aa16.22■□□□□ 0.19
HMGN1-215ENST00000485550 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.22■□□□□ 0.19
HMGN1-215ENST00000485550 TRPM2O94759 1503 aa16.22■□□□□ 0.19
HMGN1-215ENST00000485550 ASXL1Q8IXJ9 1541 aa16.22■□□□□ 0.19
HMGN1-215ENST00000485550 ADGRL2O95490 1459 aa16.22■□□□□ 0.19
HMGN1-215ENST00000485550 PTPRUQ92729 1446 aa16.21■□□□□ 0.19
HMGN1-215ENST00000485550 AMOTL2Q9Y2J4 779 aa16.21■□□□□ 0.19
HMGN1-215ENST00000485550 C8orf37Q96NL8 207 aa16.2■□□□□ 0.18
HMGN1-215ENST00000485550 PIK3R4Q99570 1358 aa16.2■□□□□ 0.18
HMGN1-215ENST00000485550 UNC13BO14795 1591 aa16.2■□□□□ 0.18
HMGN1-215ENST00000485550 QTRT2Q9H974 415 aaKnown RBP16.19■□□□□ 0.18
HMGN1-215ENST00000485550 SETD5Q9C0A6 1442 aa16.19■□□□□ 0.18
HMGN1-215ENST00000485550 DDX17Q92841 729 aaKnown RBP16.18■□□□□ 0.18
HMGN1-215ENST00000485550 XRN1Q8IZH2 1706 aaKnown RBP16.18■□□□□ 0.18
HMGN1-215ENST00000485550 NRXN3Q9Y4C0 1643 aa16.17■□□□□ 0.18
HMGN1-215ENST00000485550 RBM6P78332 1123 aaKnown RBP16.17■□□□□ 0.18
HMGN1-215ENST00000485550 MST1RQ04912 1400 aa16.17■□□□□ 0.18
HMGN1-215ENST00000485550 SRCAPQ6ZRS2 3230 aa16.17■□□□□ 0.18
HMGN1-215ENST00000485550 DCCP43146 1447 aa16.16■□□□□ 0.18
HMGN1-215ENST00000485550 LRRC59Q96AG4 307 aaKnown RBP16.15■□□□□ 0.18
HMGN1-215ENST00000485550 PNPLA6Q8IY17 1366 aa16.14■□□□□ 0.17
HMGN1-215ENST00000485550 NALCNQ8IZF0 1738 aa16.14■□□□□ 0.17
HMGN1-215ENST00000485550 ADAMTS2O95450 1211 aa16.12■□□□□ 0.17
HMGN1-215ENST00000485550 ROCK1Q13464 1354 aa16.12■□□□□ 0.17
HMGN1-215ENST00000485550 IQGAP3Q86VI3 1631 aa16.12■□□□□ 0.17
HMGN1-215ENST00000485550 NGLY1Q96IV0 654 aa16.11■□□□□ 0.17
HMGN1-215ENST00000485550 NUP155O75694 1391 aa16.11■□□□□ 0.17
HMGN1-215ENST00000485550 ATAD2Q6PL18 1390 aa16.1■□□□□ 0.17
HMGN1-215ENST00000485550 SETBP1Q9Y6X0 1596 aa16.09■□□□□ 0.17
HMGN1-215ENST00000485550 SPHKAPQ2M3C7 1700 aa16.08■□□□□ 0.17
HMGN1-215ENST00000485550 METP08581 1390 aa16.08■□□□□ 0.16
HMGN1-215ENST00000485550 ADGRL3Q9HAR2 1447 aa16.08■□□□□ 0.16
HMGN1-215ENST00000485550 ZRANB1Q9UGI0 708 aa16.06■□□□□ 0.16
HMGN1-215ENST00000485550 USP21Q9UK80 565 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms