RNA–Protein interactions for RNA: ENST00000484895.5

LSP1-215, Transcript of lymphocyte specific protein 1, humanhuman

TSL 5

Gene LSP1, Length 436 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-215ENST00000484895 ANKRD50Q9ULJ7 1429 aa22.31■■□□□ 1.16
LSP1-215ENST00000484895 CHGAP10645 457 aaKnown RBP22.31■■□□□ 1.16
LSP1-215ENST00000484895 TRIM26Q12899 539 aaPredicted RBP22.31■■□□□ 1.16
LSP1-215ENST00000484895 KCNA6P17658 529 aa22.3■■□□□ 1.16
LSP1-215ENST00000484895 TET3O43151 1660 aa22.29■■□□□ 1.16
LSP1-215ENST00000484895 NWD1Q149M9 1564 aa22.26■■□□□ 1.15
LSP1-215ENST00000484895 NUTM2DQ5VT03 806 aaPredicted RBP22.26■■□□□ 1.15
LSP1-215ENST00000484895 SLC52A1Q9NWF4 448 aa22.25■■□□□ 1.15
LSP1-215ENST00000484895 NKTRP30414 1462 aaKnown RBP22.25■■□□□ 1.15
LSP1-215ENST00000484895 MSH6P52701 1360 aa22.25■■□□□ 1.15
LSP1-215ENST00000484895 FAM135BQ49AJ0 1406 aa22.24■■□□□ 1.15
LSP1-215ENST00000484895 RIMS2Q9UQ26 1411 aa22.24■■□□□ 1.15
LSP1-215ENST00000484895 ITGAEP38570 1179 aa22.24■■□□□ 1.15
LSP1-215ENST00000484895 ROCK1Q13464 1354 aa22.24■■□□□ 1.15
LSP1-215ENST00000484895 RPRD2Q5VT52 1461 aaKnown RBP22.23■■□□□ 1.15
LSP1-215ENST00000484895 C14orf37Q86TY3 774 aa22.22■■□□□ 1.15
LSP1-215ENST00000484895 PHLPP1O60346 1717 aa22.22■■□□□ 1.15
LSP1-215ENST00000484895 UNC13BO14795 1591 aa22.21■■□□□ 1.15
LSP1-215ENST00000484895 TMEM131LA2VDJ0 1609 aa22.21■■□□□ 1.15
LSP1-215ENST00000484895 RGS17Q9UGC6 210 aaPredicted RBP22.21■■□□□ 1.15
LSP1-215ENST00000484895 E9PCH4 1651 aa22.2■■□□□ 1.15
LSP1-215ENST00000484895 ZFYVE9O95405 1425 aa22.2■■□□□ 1.14
LSP1-215ENST00000484895 PLEKHG1Q9ULL1 1385 aa22.19■■□□□ 1.14
LSP1-215ENST00000484895 CHD2O14647 1828 aaKnown RBP22.18■■□□□ 1.14
LSP1-215ENST00000484895 ACIN1Q9UKV3 1341 aaKnown RBP22.17■■□□□ 1.14
LSP1-215ENST00000484895 HDGFP51858 240 aaKnown RBP22.14■■□□□ 1.13
LSP1-215ENST00000484895 SLAIN2Q9P270 581 aa22.14■■□□□ 1.13
LSP1-215ENST00000484895 IQGAP3Q86VI3 1631 aa22.13■■□□□ 1.13
LSP1-215ENST00000484895 POTEAQ6S8J7 498 aa22.13■■□□□ 1.13
LSP1-215ENST00000484895 SETD1AO15047 1707 aaKnown RBP22.12■■□□□ 1.13
LSP1-215ENST00000484895 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.1■■□□□ 1.13
LSP1-215ENST00000484895 NUP155O75694 1391 aa22.1■■□□□ 1.13
LSP1-215ENST00000484895 HFM1A2PYH4 1435 aa22.09■■□□□ 1.13
LSP1-215ENST00000484895 ADAMTS13Q76LX8 1427 aa22.07■■□□□ 1.12
LSP1-215ENST00000484895 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.07■■□□□ 1.12
LSP1-215ENST00000484895 MEX3CQ5U5Q3 659 aaKnown RBP22.07■■□□□ 1.12
LSP1-215ENST00000484895 JCADQ9P266 1359 aa22.07■■□□□ 1.12
LSP1-215ENST00000484895 DIP2AQ14689 1571 aa22.07■■□□□ 1.12
LSP1-215ENST00000484895 COL16A1Q07092 1604 aaPredicted RBP22.06■■□□□ 1.12
LSP1-215ENST00000484895 TBX22Q9Y458 520 aa22.06■■□□□ 1.12
LSP1-215ENST00000484895 TRPM2O94759 1503 aa22.06■■□□□ 1.12
LSP1-215ENST00000484895 ATF3P18847 181 aa22.05■■□□□ 1.12
LSP1-215ENST00000484895 ZNF326Q5BKZ1 582 aaKnown RBP22.04■■□□□ 1.12
LSP1-215ENST00000484895 SPHKAPQ2M3C7 1700 aa22.03■■□□□ 1.12
LSP1-215ENST00000484895 NAIPQ13075 1403 aa22.02■■□□□ 1.12
LSP1-215ENST00000484895 SETD5Q9C0A6 1442 aa22■■□□□ 1.11
LSP1-215ENST00000484895 LRP6O75581 1613 aa22■■□□□ 1.11
LSP1-215ENST00000484895 HRCP23327 699 aa22■■□□□ 1.11
LSP1-215ENST00000484895 CADPS2Q86UW7 1296 aa22■■□□□ 1.11
LSP1-215ENST00000484895 AMOTL2Q9Y2J4 779 aa22■■□□□ 1.11
LSP1-215ENST00000484895 PTPRUQ92729 1446 aa21.98■■□□□ 1.11
LSP1-215ENST00000484895 PCGF6Q9BYE7 350 aa21.98■■□□□ 1.11
LSP1-215ENST00000484895 NUTM2BA6NNL0 878 aaPredicted RBP21.97■■□□□ 1.11
LSP1-215ENST00000484895 NUTM2EB1AL46 878 aaPredicted RBP21.97■■□□□ 1.11
LSP1-215ENST00000484895 NUTM2AQ8IVF1 878 aaPredicted RBP21.97■■□□□ 1.11
LSP1-215ENST00000484895 C19orf44Q9H6X5 657 aa21.97■■□□□ 1.11
LSP1-215ENST00000484895 AHDC1Q5TGY3 1603 aaPredicted RBP21.96■■□□□ 1.11
LSP1-215ENST00000484895 NRXN3Q9Y4C0 1643 aa21.96■■□□□ 1.11
LSP1-215ENST00000484895 PIK3R4Q99570 1358 aa21.96■■□□□ 1.11
LSP1-215ENST00000484895 NCOA3Q9Y6Q9 1424 aa21.96■■□□□ 1.11
LSP1-215ENST00000484895 TRIM52Q96A61 297 aa21.95■■□□□ 1.1
LSP1-215ENST00000484895 SHPRHQ149N8 1683 aa21.95■■□□□ 1.1
LSP1-215ENST00000484895 XRN1Q8IZH2 1706 aaKnown RBP21.94■■□□□ 1.1
LSP1-215ENST00000484895 CLTCL1P53675 1640 aa21.93■■□□□ 1.1
LSP1-215ENST00000484895 SPATA31A6Q5VVP1 1343 aa21.93■■□□□ 1.1
LSP1-215ENST00000484895 BRINP3Q76B58 766 aa21.92■■□□□ 1.1
LSP1-215ENST00000484895 SETBP1Q9Y6X0 1596 aa21.91■■□□□ 1.1
LSP1-215ENST00000484895 ASXL1Q8IXJ9 1541 aa21.91■■□□□ 1.1
LSP1-215ENST00000484895 METP08581 1390 aa21.89■■□□□ 1.1
LSP1-215ENST00000484895 RAB3GAP2Q9H2M9 1393 aa21.89■■□□□ 1.1
LSP1-215ENST00000484895 KIF1BO60333 1816 aa21.87■■□□□ 1.09
LSP1-215ENST00000484895 NALCNQ8IZF0 1738 aa21.87■■□□□ 1.09
LSP1-215ENST00000484895 ZNF772Q68DY9 489 aaPredicted RBP21.87■■□□□ 1.09
LSP1-215ENST00000484895 DDX17Q92841 729 aaKnown RBP21.87■■□□□ 1.09
LSP1-215ENST00000484895 NEXMIFQ5QGS0 1516 aa21.86■■□□□ 1.09
LSP1-215ENST00000484895 MST1RQ04912 1400 aa21.86■■□□□ 1.09
LSP1-215ENST00000484895 DCCP43146 1447 aa21.85■■□□□ 1.09
LSP1-215ENST00000484895 NHSL1Q5SYE7 1610 aa21.84■■□□□ 1.09
LSP1-215ENST00000484895 ADGRL3Q9HAR2 1447 aa21.81■■□□□ 1.08
LSP1-215ENST00000484895 AFF2P51816 1311 aa21.8■■□□□ 1.08
LSP1-215ENST00000484895 C8orf37Q96NL8 207 aa21.8■■□□□ 1.08
LSP1-215ENST00000484895 RXRBP28702 533 aa21.79■■□□□ 1.08
LSP1-215ENST00000484895 SLC4A1APQ9BWU0 796 aaKnown RBP21.76■■□□□ 1.07
LSP1-215ENST00000484895 LRRC59Q96AG4 307 aaKnown RBP21.75■■□□□ 1.07
LSP1-215ENST00000484895 ADAMTS2O95450 1211 aa21.74■■□□□ 1.07
LSP1-215ENST00000484895 UPF1Q92900 1129 aaKnown RBP eCLIP21.74■■□□□ 1.07
LSP1-215ENST00000484895 PNPLA6Q8IY17 1366 aa21.74■■□□□ 1.07
LSP1-215ENST00000484895 C1orf167Q5SNV9 1468 aa21.72■■□□□ 1.07
LSP1-215ENST00000484895 MPHOSPH9Q99550 1183 aa21.71■■□□□ 1.07
LSP1-215ENST00000484895 ROBO2Q9HCK4 1378 aa21.71■■□□□ 1.07
LSP1-215ENST00000484895 FOXD1Q16676 465 aa21.7■■□□□ 1.06
LSP1-215ENST00000484895 PTCH1Q13635 1447 aa21.7■■□□□ 1.06
LSP1-215ENST00000484895 PPLO60437 1756 aa21.69■■□□□ 1.06
LSP1-215ENST00000484895 VGFO15240 615 aaPredicted RBP21.69■■□□□ 1.06
LSP1-215ENST00000484895 ORAI2Q96SN7 254 aa21.69■■□□□ 1.06
LSP1-215ENST00000484895 RGS12O14924 1447 aa21.68■■□□□ 1.06
LSP1-215ENST00000484895 NGLY1Q96IV0 654 aa21.67■■□□□ 1.06
LSP1-215ENST00000484895 QTRT2Q9H974 415 aaKnown RBP21.67■■□□□ 1.06
LSP1-215ENST00000484895 CDK12Q9NYV4 1490 aaPredicted RBP21.64■■□□□ 1.06
LSP1-215ENST00000484895 NUTM2FA1L443 756 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms