RNA–Protein interactions for RNA: ENST00000484476.5

LDLRAP1-205, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 1 (best)

Gene LDLRAP1, Length 657 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-205ENST00000484476 PROSER2Q86WR7 435 aaPredicted RBP20.85■□□□□ 0.93
LDLRAP1-205ENST00000484476 SENP3Q9H4L4 574 aaPredicted RBP20.85■□□□□ 0.93
LDLRAP1-205ENST00000484476 RIMS2Q9UQ26 1411 aa20.85■□□□□ 0.93
LDLRAP1-205ENST00000484476 ACIN1Q9UKV3 1341 aaKnown RBP20.84■□□□□ 0.93
LDLRAP1-205ENST00000484476 SLC4A1APQ9BWU0 796 aaKnown RBP20.84■□□□□ 0.93
LDLRAP1-205ENST00000484476 HFM1A2PYH4 1435 aa20.84■□□□□ 0.93
LDLRAP1-205ENST00000484476 E9PCH4 1651 aa20.82■□□□□ 0.92
LDLRAP1-205ENST00000484476 PLEKHG1Q9ULL1 1385 aa20.82■□□□□ 0.92
LDLRAP1-205ENST00000484476 NUTM2DQ5VT03 806 aaPredicted RBP20.81■□□□□ 0.92
LDLRAP1-205ENST00000484476 LRRC7Q96NW7 1537 aa20.8■□□□□ 0.92
LDLRAP1-205ENST00000484476 TBX22Q9Y458 520 aa20.8■□□□□ 0.92
LDLRAP1-205ENST00000484476 ZFYVE9O95405 1425 aa20.78■□□□□ 0.92
LDLRAP1-205ENST00000484476 TMEM131LA2VDJ0 1609 aa20.77■□□□□ 0.92
LDLRAP1-205ENST00000484476 DISP3Q9P2K9 1392 aa20.76■□□□□ 0.91
LDLRAP1-205ENST00000484476 C14orf37Q86TY3 774 aa20.76■□□□□ 0.91
LDLRAP1-205ENST00000484476 HSPA1LP34931 641 aa20.75■□□□□ 0.91
LDLRAP1-205ENST00000484476 TMEM94Q12767 1356 aa20.74■□□□□ 0.91
LDLRAP1-205ENST00000484476 VGFO15240 615 aaPredicted RBP20.7■□□□□ 0.9
LDLRAP1-205ENST00000484476 MSH6P52701 1360 aa20.7■□□□□ 0.9
LDLRAP1-205ENST00000484476 RBM33Q96EV2 1170 aaKnown RBP20.69■□□□□ 0.9
LDLRAP1-205ENST00000484476 PIK3R4Q99570 1358 aa20.69■□□□□ 0.9
LDLRAP1-205ENST00000484476 STRCP1A6NGW2 1772 aa20.69■□□□□ 0.9
LDLRAP1-205ENST00000484476 NKTRP30414 1462 aaKnown RBP20.69■□□□□ 0.9
LDLRAP1-205ENST00000484476 SPHKAPQ2M3C7 1700 aa20.68■□□□□ 0.9
LDLRAP1-205ENST00000484476 MPHOSPH9Q99550 1183 aa20.68■□□□□ 0.9
LDLRAP1-205ENST00000484476 MYO5BQ9ULV0 1848 aa20.67■□□□□ 0.9
LDLRAP1-205ENST00000484476 AMOTL2Q9Y2J4 779 aa20.66■□□□□ 0.9
LDLRAP1-205ENST00000484476 RPGRIP1LQ68CZ1 1315 aa20.66■□□□□ 0.9
LDLRAP1-205ENST00000484476 TRPM2O94759 1503 aa20.65■□□□□ 0.9
LDLRAP1-205ENST00000484476 SETD5Q9C0A6 1442 aa20.64■□□□□ 0.89
LDLRAP1-205ENST00000484476 ATF3P18847 181 aa20.64■□□□□ 0.89
LDLRAP1-205ENST00000484476 FOXD1Q16676 465 aa20.63■□□□□ 0.89
LDLRAP1-205ENST00000484476 SLAIN2Q9P270 581 aa20.63■□□□□ 0.89
LDLRAP1-205ENST00000484476 DIP2AQ14689 1571 aa20.63■□□□□ 0.89
LDLRAP1-205ENST00000484476 ADAMTS13Q76LX8 1427 aa20.62■□□□□ 0.89
LDLRAP1-205ENST00000484476 C19orf44Q9H6X5 657 aa20.62■□□□□ 0.89
LDLRAP1-205ENST00000484476 NCOA3Q9Y6Q9 1424 aa20.61■□□□□ 0.89
LDLRAP1-205ENST00000484476 CADPS2Q86UW7 1296 aa20.61■□□□□ 0.89
LDLRAP1-205ENST00000484476 CCDC144AA2RUR9 1427 aa20.61■□□□□ 0.89
LDLRAP1-205ENST00000484476 FAM135BQ49AJ0 1406 aa20.6■□□□□ 0.89
LDLRAP1-205ENST00000484476 NWD1Q149M9 1564 aa20.59■□□□□ 0.89
LDLRAP1-205ENST00000484476 CLTCL1P53675 1640 aa20.58■□□□□ 0.89
LDLRAP1-205ENST00000484476 RGL3Q3MIN7 710 aa20.58■□□□□ 0.89
LDLRAP1-205ENST00000484476 PHF23Q9BUL5 403 aaPredicted RBP20.58■□□□□ 0.89
LDLRAP1-205ENST00000484476 KIF1BO60333 1816 aa20.57■□□□□ 0.88
LDLRAP1-205ENST00000484476 CHD2O14647 1828 aaKnown RBP20.55■□□□□ 0.88
LDLRAP1-205ENST00000484476 ALKQ9UM73 1620 aa20.53■□□□□ 0.88
LDLRAP1-205ENST00000484476 SETBP1Q9Y6X0 1596 aa20.53■□□□□ 0.88
LDLRAP1-205ENST00000484476 METP08581 1390 aa20.52■□□□□ 0.88
LDLRAP1-205ENST00000484476 RAB3GAP2Q9H2M9 1393 aa20.52■□□□□ 0.88
LDLRAP1-205ENST00000484476 NEXMIFQ5QGS0 1516 aa20.51■□□□□ 0.87
LDLRAP1-205ENST00000484476 XIRP1Q702N8 1843 aaKnown RBP20.5■□□□□ 0.87
LDLRAP1-205ENST00000484476 ANKRD30BQ9BXX2 1392 aa20.49■□□□□ 0.87
LDLRAP1-205ENST00000484476 HRCP23327 699 aa20.49■□□□□ 0.87
LDLRAP1-205ENST00000484476 PTPRUQ92729 1446 aa20.48■□□□□ 0.87
LDLRAP1-205ENST00000484476 ILDR2Q71H61 639 aa20.45■□□□□ 0.86
LDLRAP1-205ENST00000484476 ROBO1Q9Y6N7 1651 aa20.43■□□□□ 0.86
LDLRAP1-205ENST00000484476 DCCP43146 1447 aa20.43■□□□□ 0.86
LDLRAP1-205ENST00000484476 NRXN3Q9Y4C0 1643 aa20.42■□□□□ 0.86
LDLRAP1-205ENST00000484476 ADGRF5Q8IZF2 1346 aa20.42■□□□□ 0.86
LDLRAP1-205ENST00000484476 STK26Q9P289 416 aa20.41■□□□□ 0.86
LDLRAP1-205ENST00000484476 SPATA31E1Q6ZUB1 1445 aa20.41■□□□□ 0.86
LDLRAP1-205ENST00000484476 MED1Q15648 1581 aaPredicted RBP20.41■□□□□ 0.86
LDLRAP1-205ENST00000484476 JCADQ9P266 1359 aa20.39■□□□□ 0.85
LDLRAP1-205ENST00000484476 SOCS7O14512 581 aa20.39■□□□□ 0.85
LDLRAP1-205ENST00000484476 BRINP3Q76B58 766 aa20.38■□□□□ 0.85
LDLRAP1-205ENST00000484476 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.38■□□□□ 0.85
LDLRAP1-205ENST00000484476 ADGRL3Q9HAR2 1447 aa20.37■□□□□ 0.85
LDLRAP1-205ENST00000484476 XRN1Q8IZH2 1706 aaKnown RBP20.37■□□□□ 0.85
LDLRAP1-205ENST00000484476 PTCH1Q13635 1447 aa20.36■□□□□ 0.85
LDLRAP1-205ENST00000484476 MEX3CQ5U5Q3 659 aaKnown RBP20.35■□□□□ 0.85
LDLRAP1-205ENST00000484476 STAC3Q96MF2 364 aa20.35■□□□□ 0.85
LDLRAP1-205ENST00000484476 PPLO60437 1756 aa20.35■□□□□ 0.85
LDLRAP1-205ENST00000484476 ROBO2Q9HCK4 1378 aa20.34■□□□□ 0.85
LDLRAP1-205ENST00000484476 TMEM132EQ6IEE7 984 aa20.34■□□□□ 0.85
LDLRAP1-205ENST00000484476 LRRC59Q96AG4 307 aaKnown RBP20.33■□□□□ 0.85
LDLRAP1-205ENST00000484476 C14orf93Q9H972 538 aaKnown RBP20.33■□□□□ 0.85
LDLRAP1-205ENST00000484476 PHLPP1O60346 1717 aa20.33■□□□□ 0.84
LDLRAP1-205ENST00000484476 DHX57Q6P158 1386 aaKnown RBP20.33■□□□□ 0.84
LDLRAP1-205ENST00000484476 SPATA31A6Q5VVP1 1343 aa20.32■□□□□ 0.84
LDLRAP1-205ENST00000484476 KDM2AQ9Y2K7 1162 aa20.32■□□□□ 0.84
LDLRAP1-205ENST00000484476 DCAF11Q8TEB1 546 aa20.31■□□□□ 0.84
LDLRAP1-205ENST00000484476 LRPPRCP42704 1394 aaKnown RBP20.31■□□□□ 0.84
LDLRAP1-205ENST00000484476 MST1RQ04912 1400 aa20.3■□□□□ 0.84
LDLRAP1-205ENST00000484476 ABCC11Q96J66 1382 aa20.3■□□□□ 0.84
LDLRAP1-205ENST00000484476 PIK3C2GO75747 1445 aa20.29■□□□□ 0.84
LDLRAP1-205ENST00000484476 CFAP70Q5T0N1 1121 aa20.29■□□□□ 0.84
LDLRAP1-205ENST00000484476 WAPLQ7Z5K2 1190 aa20.28■□□□□ 0.84
LDLRAP1-205ENST00000484476 SIRT1Q96EB6 747 aa20.28■□□□□ 0.84
LDLRAP1-205ENST00000484476 PRAG1Q86YV5 1406 aa20.27■□□□□ 0.84
LDLRAP1-205ENST00000484476 ESCO1Q5FWF5 840 aa20.27■□□□□ 0.84
LDLRAP1-205ENST00000484476 POGKQ9P215 609 aa20.27■□□□□ 0.84
LDLRAP1-205ENST00000484476 NUTM2BA6NNL0 878 aaPredicted RBP20.26■□□□□ 0.83
LDLRAP1-205ENST00000484476 NUTM2EB1AL46 878 aaPredicted RBP20.26■□□□□ 0.83
LDLRAP1-205ENST00000484476 NUTM2AQ8IVF1 878 aaPredicted RBP20.26■□□□□ 0.83
LDLRAP1-205ENST00000484476 YTHDC2Q9H6S0 1430 aaKnown RBP20.26■□□□□ 0.83
LDLRAP1-205ENST00000484476 C1orf167Q5SNV9 1468 aa20.25■□□□□ 0.83
LDLRAP1-205ENST00000484476 AHDC1Q5TGY3 1603 aaPredicted RBP20.25■□□□□ 0.83
LDLRAP1-205ENST00000484476 ASXL1Q8IXJ9 1541 aa20.25■□□□□ 0.83
LDLRAP1-205ENST00000484476 MYOM2P54296 1465 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms