RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 CCDC102AQ96A19 550 aa12.18□□□□□ -0.46
CCDC66-219ENST00000484441 HDGFP51858 240 aaKnown RBP12.17□□□□□ -0.46
CCDC66-219ENST00000484441 WBP1LQ9NX94 342 aa12.17□□□□□ -0.46
CCDC66-219ENST00000484441 HPS5Q9UPZ3 1129 aa12.17□□□□□ -0.46
CCDC66-219ENST00000484441 SLF2Q8IX21 1173 aa12.16□□□□□ -0.46
CCDC66-219ENST00000484441 PPP4CP60510 307 aa12.12□□□□□ -0.47
CCDC66-219ENST00000484441 NECTIN2Q92692 538 aa12.12□□□□□ -0.47
CCDC66-219ENST00000484441 DAXXQ9UER7 740 aaPredicted RBP12.11□□□□□ -0.47
CCDC66-219ENST00000484441 SLC4A3P48751 1232 aa12.09□□□□□ -0.47
CCDC66-219ENST00000484441 NLRP7Q8WX94 980 aa12.09□□□□□ -0.47
CCDC66-219ENST00000484441 RNF40O75150 1001 aa12.08□□□□□ -0.48
CCDC66-219ENST00000484441 KRI1Q8N9T8 703 aaKnown RBP12.08□□□□□ -0.48
CCDC66-219ENST00000484441 SLC10A3P09131 477 aa12.07□□□□□ -0.48
CCDC66-219ENST00000484441 APLP1P51693 650 aa12.06□□□□□ -0.48
CCDC66-219ENST00000484441 AMHR2Q16671 573 aa12.06□□□□□ -0.48
CCDC66-219ENST00000484441 TMUB1Q9BVT8 246 aa12.06□□□□□ -0.48
CCDC66-219ENST00000484441 ITGBL1O95965 494 aaPredicted RBP12.04□□□□□ -0.48
CCDC66-219ENST00000484441 MDM2Q00987 491 aaPredicted RBP12.02□□□□□ -0.49
CCDC66-219ENST00000484441 IFFO2Q5TF58 517 aa12.02□□□□□ -0.49
CCDC66-219ENST00000484441 SULF1Q8IWU6 871 aa12.02□□□□□ -0.49
CCDC66-219ENST00000484441 AK7Q96M32 723 aa12.02□□□□□ -0.49
CCDC66-219ENST00000484441 PRR14Q9BWN1 585 aa12.01□□□□□ -0.49
CCDC66-219ENST00000484441 GPCPD1Q9NPB8 672 aa12.01□□□□□ -0.49
CCDC66-219ENST00000484441 TRIM66O15016 1216 aa12□□□□□ -0.49
CCDC66-219ENST00000484441 CFHP08603 1231 aa12□□□□□ -0.49
CCDC66-219ENST00000484441 CLCN1P35523 988 aa12□□□□□ -0.49
CCDC66-219ENST00000484441 SLC24A3Q9HC58 644 aa11.99□□□□□ -0.49
CCDC66-219ENST00000484441 PLA2G2EQ9NZK7 142 aa11.99□□□□□ -0.49
CCDC66-219ENST00000484441 DDX11L8A8MPP1 907 aa11.98□□□□□ -0.49
CCDC66-219ENST00000484441 RSPH4AQ5TD94 716 aa11.98□□□□□ -0.49
CCDC66-219ENST00000484441 REPIN1Q9BWE0 567 aaKnown RBP11.98□□□□□ -0.49
CCDC66-219ENST00000484441 ACTN4O43707 911 aaKnown RBP11.97□□□□□ -0.49
CCDC66-219ENST00000484441 CD46P15529 392 aa11.97□□□□□ -0.49
CCDC66-219ENST00000484441 KMT5BQ4FZB7 885 aa11.97□□□□□ -0.49
CCDC66-219ENST00000484441 FAM217BQ9NTX9 383 aaPredicted RBP11.97□□□□□ -0.49
CCDC66-219ENST00000484441 TJAP1Q5JTD0 557 aa11.96□□□□□ -0.49
CCDC66-219ENST00000484441 GCGRP47871 477 aa11.94□□□□□ -0.5
CCDC66-219ENST00000484441 RDH13Q8NBN7 331 aa11.94□□□□□ -0.5
CCDC66-219ENST00000484441 MTRQ99707 1265 aa11.94□□□□□ -0.5
CCDC66-219ENST00000484441 PARP9Q8IXQ6 854 aa11.93□□□□□ -0.5
CCDC66-219ENST00000484441 IL21Q9HBE4 155 aa11.92□□□□□ -0.5
CCDC66-219ENST00000484441 PCDHB3Q9Y5E6 796 aa11.92□□□□□ -0.5
CCDC66-219ENST00000484441 KCNC4Q03721 635 aa11.91□□□□□ -0.5
CCDC66-219ENST00000484441 TTLL12Q14166 644 aaPredicted RBP11.91□□□□□ -0.5
CCDC66-219ENST00000484441 GIGYF2Q6Y7W6 1299 aaKnown RBP11.91□□□□□ -0.5
CCDC66-219ENST00000484441 PDE4DQ08499 809 aa11.9□□□□□ -0.5
CCDC66-219ENST00000484441 BLOC1S3Q6QNY0 202 aa11.88□□□□□ -0.51
CCDC66-219ENST00000484441 SSTR3P32745 418 aaPredicted RBP11.87□□□□□ -0.51
CCDC66-219ENST00000484441 FUT2Q10981 343 aa11.87□□□□□ -0.51
CCDC66-219ENST00000484441 COPS2P61201 443 aa11.86□□□□□ -0.51
CCDC66-219ENST00000484441 ZNF516Q92618 1163 aa11.86□□□□□ -0.51
CCDC66-219ENST00000484441 ZPR1O75312 459 aa11.85□□□□□ -0.51
CCDC66-219ENST00000484441 MORN1Q5T089 497 aa11.85□□□□□ -0.51
CCDC66-219ENST00000484441 A0A0G2JS52 829 aa11.84□□□□□ -0.51
CCDC66-219ENST00000484441 ATP6V1AP38606 617 aa11.84□□□□□ -0.51
CCDC66-219ENST00000484441 KDM4AO75164 1064 aa11.83□□□□□ -0.52
CCDC66-219ENST00000484441 MS4A1P11836 297 aa11.83□□□□□ -0.52
CCDC66-219ENST00000484441 USP46P62068 366 aa11.83□□□□□ -0.52
CCDC66-219ENST00000484441 TPRNQ4KMQ1 711 aa11.83□□□□□ -0.52
CCDC66-219ENST00000484441 PUS10Q3MIT2 529 aaKnown RBP11.82□□□□□ -0.52
CCDC66-219ENST00000484441 NR1I2O75469 434 aa11.81□□□□□ -0.52
CCDC66-219ENST00000484441 HOXA2O43364 376 aa11.79□□□□□ -0.52
CCDC66-219ENST00000484441 GRIPAP1Q4V328 841 aa11.79□□□□□ -0.52
CCDC66-219ENST00000484441 SCUBE3Q8IX30 993 aa11.79□□□□□ -0.52
CCDC66-219ENST00000484441 BEGAINQ9BUH8 593 aa11.78□□□□□ -0.52
CCDC66-219ENST00000484441 SLC27A5Q9Y2P5 690 aa11.78□□□□□ -0.52
CCDC66-219ENST00000484441 TLL1O43897 1013 aa11.77□□□□□ -0.53
CCDC66-219ENST00000484441 NKX2-3Q8TAU0 364 aa11.77□□□□□ -0.53
CCDC66-219ENST00000484441 THAP11Q96EK4 314 aa11.77□□□□□ -0.53
CCDC66-219ENST00000484441 SALL2Q9Y467 1007 aaPredicted RBP11.77□□□□□ -0.53
CCDC66-219ENST00000484441 SPIRE2Q8WWL2 714 aa11.75□□□□□ -0.53
CCDC66-219ENST00000484441 ADH1BP00325 375 aa11.74□□□□□ -0.53
CCDC66-219ENST00000484441 NUTM1Q86Y26 1132 aa11.74□□□□□ -0.53
CCDC66-219ENST00000484441 HLA-CQ95604 372 aa11.73□□□□□ -0.53
CCDC66-219ENST00000484441 GPBP1L1Q9HC44 474 aaPredicted RBP11.73□□□□□ -0.53
CCDC66-219ENST00000484441 BRICD5Q6PL45 260 aa11.72□□□□□ -0.53
CCDC66-219ENST00000484441 KDM4CQ9H3R0 1056 aa11.72□□□□□ -0.53
CCDC66-219ENST00000484441 RGS20O76081 388 aa11.71□□□□□ -0.53
CCDC66-219ENST00000484441 DIXDC1Q155Q3 683 aa11.71□□□□□ -0.53
CCDC66-219ENST00000484441 PPP1R18Q6NYC8 613 aa11.71□□□□□ -0.53
CCDC66-219ENST00000484441 Q3C1V9 767 aa11.7□□□□□ -0.54
CCDC66-219ENST00000484441 SPSB2Q99619 263 aa11.7□□□□□ -0.54
CCDC66-219ENST00000484441 TBC1D2Q9BYX2 928 aa11.7□□□□□ -0.54
CCDC66-219ENST00000484441 FMNL1O95466 1100 aaPredicted RBP11.69□□□□□ -0.54
CCDC66-219ENST00000484441 GJA5P36382 358 aa11.69□□□□□ -0.54
CCDC66-219ENST00000484441 RNF19BQ6ZMZ0 732 aa11.69□□□□□ -0.54
CCDC66-219ENST00000484441 MOXD2PA6NHM9 499 aa11.68□□□□□ -0.54
CCDC66-219ENST00000484441 GUCA2AQ02747 115 aa11.68□□□□□ -0.54
CCDC66-219ENST00000484441 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.68□□□□□ -0.54
CCDC66-219ENST00000484441 MSS51Q4VC12 460 aa11.67□□□□□ -0.54
CCDC66-219ENST00000484441 PCDHGC3Q9UN70 934 aa11.67□□□□□ -0.54
CCDC66-219ENST00000484441 FDX1P10109 184 aa11.66□□□□□ -0.54
CCDC66-219ENST00000484441 GGCXP38435 758 aa11.66□□□□□ -0.54
CCDC66-219ENST00000484441 FAM160A2Q8N612 972 aaPredicted RBP11.66□□□□□ -0.54
CCDC66-219ENST00000484441 S1PR4O95977 384 aa11.65□□□□□ -0.54
CCDC66-219ENST00000484441 NDUFV2P19404 249 aa11.65□□□□□ -0.54
CCDC66-219ENST00000484441 BRPF1P55201 1214 aaPredicted RBP11.65□□□□□ -0.54
CCDC66-219ENST00000484441 RSBN1LQ6PCB5 846 aaPredicted RBP11.65□□□□□ -0.54
CCDC66-219ENST00000484441 SLC6A16Q9GZN6 736 aa11.65□□□□□ -0.54
CCDC66-219ENST00000484441 SPTLC1O15269 473 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms