RNA–Protein interactions for RNA: ENST00000484181.5

PCCB-217, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 1,683 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-217ENST00000484181 CDCA8Q53HL2 280 aa22.69■■□□□ 1.22
PCCB-217ENST00000484181 PPP6R1Q9UPN7 881 aa22.69■■□□□ 1.22
PCCB-217ENST00000484181 PIK3C2BO00750 1634 aa22.68■■□□□ 1.22
PCCB-217ENST00000484181 TESK2Q96S53 571 aa22.67■■□□□ 1.22
PCCB-217ENST00000484181 MRS2Q9HD23 443 aa22.67■■□□□ 1.22
PCCB-217ENST00000484181 KIF13AQ9H1H9 1805 aa22.67■■□□□ 1.22
PCCB-217ENST00000484181 CHGAP10645 457 aaKnown RBP22.65■■□□□ 1.22
PCCB-217ENST00000484181 SETBP1Q9Y6X0 1596 aa22.65■■□□□ 1.22
PCCB-217ENST00000484181 PPLO60437 1756 aa22.64■■□□□ 1.22
PCCB-217ENST00000484181 ARHGEF40Q8TER5 1519 aa22.64■■□□□ 1.21
PCCB-217ENST00000484181 SYNMO15061 1565 aa22.63■■□□□ 1.21
PCCB-217ENST00000484181 SLC52A1Q9NWF4 448 aa22.63■■□□□ 1.21
PCCB-217ENST00000484181 RALBP1Q15311 655 aa22.62■■□□□ 1.21
PCCB-217ENST00000484181 DISP3Q9P2K9 1392 aa22.62■■□□□ 1.21
PCCB-217ENST00000484181 SIGLEC1Q9BZZ2 1709 aa22.62■■□□□ 1.21
PCCB-217ENST00000484181 PIK3C2GO75747 1445 aa22.6■■□□□ 1.21
PCCB-217ENST00000484181 PREX1Q8TCU6 1659 aa22.6■■□□□ 1.21
PCCB-217ENST00000484181 ADGRF5Q8IZF2 1346 aa22.6■■□□□ 1.21
PCCB-217ENST00000484181 HNRNPUQ00839 825 aaKnown RBP eCLIP22.58■■□□□ 1.2
PCCB-217ENST00000484181 MYO3AQ8NEV4 1616 aa22.56■■□□□ 1.2
PCCB-217ENST00000484181 VGFO15240 615 aaPredicted RBP22.55■■□□□ 1.2
PCCB-217ENST00000484181 CFAP70Q5T0N1 1121 aa22.55■■□□□ 1.2
PCCB-217ENST00000484181 MYBBP1AQ9BQG0 1328 aaKnown RBP22.55■■□□□ 1.2
PCCB-217ENST00000484181 SBNO2Q9Y2G9 1366 aa22.54■■□□□ 1.2
PCCB-217ENST00000484181 CFAP65Q6ZU64 1925 aaKnown RBP22.53■■□□□ 1.2
PCCB-217ENST00000484181 ZFYVE9O95405 1425 aa22.53■■□□□ 1.2
PCCB-217ENST00000484181 NEXMIFQ5QGS0 1516 aa22.53■■□□□ 1.2
PCCB-217ENST00000484181 BRD4O60885 1362 aaPredicted RBP22.52■■□□□ 1.2
PCCB-217ENST00000484181 ERVK-7P63135 1459 aa22.52■■□□□ 1.2
PCCB-217ENST00000484181 KDM5AP29375 1690 aaKnown RBP22.52■■□□□ 1.2
PCCB-217ENST00000484181 C14orf93Q9H972 538 aaKnown RBP22.52■■□□□ 1.2
PCCB-217ENST00000484181 FAM9BQ8IZU0 186 aa22.51■■□□□ 1.19
PCCB-217ENST00000484181 PARD3Q8TEW0 1356 aa22.49■■□□□ 1.19
PCCB-217ENST00000484181 TMC1Q8TDI8 760 aa22.49■■□□□ 1.19
PCCB-217ENST00000484181 CCDC184Q52MB2 194 aa22.49■■□□□ 1.19
PCCB-217ENST00000484181 CLTCQ00610 1675 aaKnown RBP22.48■■□□□ 1.19
PCCB-217ENST00000484181 TMEM131LA2VDJ0 1609 aa22.47■■□□□ 1.19
PCCB-217ENST00000484181 IDI1Q13907 227 aa22.47■■□□□ 1.19
PCCB-217ENST00000484181 ADGRB1O14514 1584 aa22.47■■□□□ 1.19
PCCB-217ENST00000484181 PANK3Q9H999 370 aa22.46■■□□□ 1.19
PCCB-217ENST00000484181 ZBED9Q6R2W3 1325 aa22.46■■□□□ 1.19
PCCB-217ENST00000484181 PER1O15534 1290 aaPredicted RBP22.46■■□□□ 1.19
PCCB-217ENST00000484181 NLRP13Q86W25 1043 aa22.46■■□□□ 1.19
PCCB-217ENST00000484181 ESF1Q9H501 851 aaKnown RBP22.46■■□□□ 1.19
PCCB-217ENST00000484181 SPATA31D1Q6ZQQ2 1576 aa22.45■■□□□ 1.19
PCCB-217ENST00000484181 CENPJQ9HC77 1338 aaPredicted RBP22.45■■□□□ 1.18
PCCB-217ENST00000484181 NEFLP07196 543 aa22.45■■□□□ 1.18
PCCB-217ENST00000484181 CNGB1Q14028 1251 aaPredicted RBP22.43■■□□□ 1.18
PCCB-217ENST00000484181 KNSTRNQ9Y448 316 aa22.42■■□□□ 1.18
PCCB-217ENST00000484181 STAG3Q9UJ98 1225 aa22.4■■□□□ 1.18
PCCB-217ENST00000484181 MYOM1P52179 1685 aa22.4■■□□□ 1.18
PCCB-217ENST00000484181 QRICH2Q9H0J4 1663 aa22.39■■□□□ 1.18
PCCB-217ENST00000484181 NPC1L1Q9UHC9 1359 aa22.38■■□□□ 1.17
PCCB-217ENST00000484181 ASXL1Q8IXJ9 1541 aa22.38■■□□□ 1.17
PCCB-217ENST00000484181 PNISRQ8TF01 805 aaKnown RBP22.37■■□□□ 1.17
PCCB-217ENST00000484181 MYO5BQ9ULV0 1848 aa22.35■■□□□ 1.17
PCCB-217ENST00000484181 FBXO31Q5XUX0 539 aaPredicted RBP22.35■■□□□ 1.17
PCCB-217ENST00000484181 TRAK1Q9UPV9 953 aa22.35■■□□□ 1.17
PCCB-217ENST00000484181 SUPT16HQ9Y5B9 1047 aaKnown RBP22.35■■□□□ 1.17
PCCB-217ENST00000484181 LRPPRCP42704 1394 aaKnown RBP22.35■■□□□ 1.17
PCCB-217ENST00000484181 MLECQ14165 292 aa22.34■■□□□ 1.17
PCCB-217ENST00000484181 CC2D1BQ5T0F9 858 aaKnown RBP22.34■■□□□ 1.17
PCCB-217ENST00000484181 PELP1Q8IZL8 1130 aaKnown RBP22.34■■□□□ 1.17
PCCB-217ENST00000484181 PUS7Q96PZ0 661 aaKnown RBP22.33■■□□□ 1.17
PCCB-217ENST00000484181 INSRP06213 1382 aa22.33■■□□□ 1.17
PCCB-217ENST00000484181 ARHGEF28Q8N1W1 1705 aaKnown RBP22.33■■□□□ 1.17
PCCB-217ENST00000484181 A2ML1A8K2U0 1454 aa22.31■■□□□ 1.16
PCCB-217ENST00000484181 ZMYM3Q14202 1370 aa22.3■■□□□ 1.16
PCCB-217ENST00000484181 TMEM132EQ6IEE7 984 aa22.3■■□□□ 1.16
PCCB-217ENST00000484181 EVC2Q86UK5 1308 aa22.29■■□□□ 1.16
PCCB-217ENST00000484181 NUTM2DQ5VT03 806 aaPredicted RBP22.29■■□□□ 1.16
PCCB-217ENST00000484181 AMER1Q5JTC6 1135 aaPredicted RBP22.27■■□□□ 1.16
PCCB-217ENST00000484181 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.27■■□□□ 1.16
PCCB-217ENST00000484181 HDGFP51858 240 aaKnown RBP22.26■■□□□ 1.15
PCCB-217ENST00000484181 RIMS2Q9UQ26 1411 aa22.26■■□□□ 1.15
PCCB-217ENST00000484181 ALKQ9UM73 1620 aa22.25■■□□□ 1.15
PCCB-217ENST00000484181 NINLQ9Y2I6 1382 aa22.25■■□□□ 1.15
PCCB-217ENST00000484181 TNRQ92752 1358 aa22.24■■□□□ 1.15
PCCB-217ENST00000484181 YTHDC2Q9H6S0 1430 aaKnown RBP22.24■■□□□ 1.15
PCCB-217ENST00000484181 FKBP8Q14318 412 aa22.23■■□□□ 1.15
PCCB-217ENST00000484181 SMG6Q86US8 1419 aaKnown RBP22.22■■□□□ 1.15
PCCB-217ENST00000484181 USP32Q8NFA0 1604 aa22.21■■□□□ 1.15
PCCB-217ENST00000484181 DLC1Q96QB1 1528 aa22.2■■□□□ 1.14
PCCB-217ENST00000484181 TULP4Q9NRJ4 1543 aa22.2■■□□□ 1.14
PCCB-217ENST00000484181 PPP2R1AP30153 589 aa22.2■■□□□ 1.14
PCCB-217ENST00000484181 PTPRMP28827 1452 aa22.19■■□□□ 1.14
PCCB-217ENST00000484181 BLMP54132 1417 aaPredicted RBP22.18■■□□□ 1.14
PCCB-217ENST00000484181 NLRP1Q9C000 1473 aa22.17■■□□□ 1.14
PCCB-217ENST00000484181 ATAD2Q6PL18 1390 aa22.17■■□□□ 1.14
PCCB-217ENST00000484181 ERICH6BQ5W0A0 696 aa22.17■■□□□ 1.14
PCCB-217ENST00000484181 POGKQ9P215 609 aa22.17■■□□□ 1.14
PCCB-217ENST00000484181 NSD3Q9BZ95 1437 aa22.16■■□□□ 1.14
PCCB-217ENST00000484181 WDR43Q15061 677 aaKnown RBP eCLIP22.15■■□□□ 1.14
PCCB-217ENST00000484181 STK26Q9P289 416 aa22.15■■□□□ 1.14
PCCB-217ENST00000484181 NUDCQ9Y266 331 aa22.15■■□□□ 1.14
PCCB-217ENST00000484181 NSD2O96028 1365 aa22.15■■□□□ 1.14
PCCB-217ENST00000484181 ANKRD36BQ8N2N9 1353 aa22.15■■□□□ 1.14
PCCB-217ENST00000484181 TRHP20396 242 aaPredicted RBP22.14■■□□□ 1.13
PCCB-217ENST00000484181 PDE3BQ13370 1112 aa22.14■■□□□ 1.13
PCCB-217ENST00000484181 CGNL1Q0VF96 1302 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 194.8 ms