RNA–Protein interactions for RNA: ENST00000484141.5

PCGF3-211, Transcript of polycomb group ring finger 3, humanhuman

TSL 2

Gene PCGF3, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-211ENST00000484141 KDM5AP29375 1690 aaKnown RBP25.46■■□□□ 1.67
PCGF3-211ENST00000484141 FAM135BQ49AJ0 1406 aa25.46■■□□□ 1.67
PCGF3-211ENST00000484141 NUP155O75694 1391 aa25.45■■□□□ 1.67
PCGF3-211ENST00000484141 XIRP1Q702N8 1843 aaKnown RBP25.43■■□□□ 1.66
PCGF3-211ENST00000484141 POTEAQ6S8J7 498 aa25.42■■□□□ 1.66
PCGF3-211ENST00000484141 SLC52A1Q9NWF4 448 aa25.42■■□□□ 1.66
PCGF3-211ENST00000484141 TMEM94Q12767 1356 aa25.42■■□□□ 1.66
PCGF3-211ENST00000484141 TMEM131LA2VDJ0 1609 aa25.39■■□□□ 1.66
PCGF3-211ENST00000484141 SLC26A8Q96RN1 970 aa25.38■■□□□ 1.65
PCGF3-211ENST00000484141 CHGAP10645 457 aaKnown RBP25.37■■□□□ 1.65
PCGF3-211ENST00000484141 NAIPQ13075 1403 aa25.37■■□□□ 1.65
PCGF3-211ENST00000484141 KCNA6P17658 529 aa25.36■■□□□ 1.65
PCGF3-211ENST00000484141 NUTM2DQ5VT03 806 aaPredicted RBP25.35■■□□□ 1.65
PCGF3-211ENST00000484141 PROSER2Q86WR7 435 aaPredicted RBP25.35■■□□□ 1.65
PCGF3-211ENST00000484141 RBM33Q96EV2 1170 aaKnown RBP25.35■■□□□ 1.65
PCGF3-211ENST00000484141 ZFYVE9O95405 1425 aa25.34■■□□□ 1.65
PCGF3-211ENST00000484141 ROBO1Q9Y6N7 1651 aa25.33■■□□□ 1.65
PCGF3-211ENST00000484141 RIMS2Q9UQ26 1411 aa25.32■■□□□ 1.64
PCGF3-211ENST00000484141 BCANQ96GW7 911 aa25.29■■□□□ 1.64
PCGF3-211ENST00000484141 SPHKAPQ2M3C7 1700 aa25.28■■□□□ 1.64
PCGF3-211ENST00000484141 MSH6P52701 1360 aa25.26■■□□□ 1.63
PCGF3-211ENST00000484141 NKTRP30414 1462 aaKnown RBP25.26■■□□□ 1.63
PCGF3-211ENST00000484141 PPP1R15AO75807 674 aaPredicted RBP25.24■■□□□ 1.63
PCGF3-211ENST00000484141 HFM1A2PYH4 1435 aa25.23■■□□□ 1.63
PCGF3-211ENST00000484141 PLEKHG1Q9ULL1 1385 aa25.23■■□□□ 1.63
PCGF3-211ENST00000484141 NWD1Q149M9 1564 aa25.22■■□□□ 1.63
PCGF3-211ENST00000484141 JCADQ9P266 1359 aa25.22■■□□□ 1.63
PCGF3-211ENST00000484141 SLAIN2Q9P270 581 aa25.22■■□□□ 1.63
PCGF3-211ENST00000484141 TRIM52Q96A61 297 aa25.21■■□□□ 1.63
PCGF3-211ENST00000484141 CLTCL1P53675 1640 aa25.2■■□□□ 1.62
PCGF3-211ENST00000484141 SETD1AO15047 1707 aaKnown RBP25.19■■□□□ 1.62
PCGF3-211ENST00000484141 CHD2O14647 1828 aaKnown RBP25.19■■□□□ 1.62
PCGF3-211ENST00000484141 ADAMTS13Q76LX8 1427 aa25.18■■□□□ 1.62
PCGF3-211ENST00000484141 PHLPP1O60346 1717 aa25.17■■□□□ 1.62
PCGF3-211ENST00000484141 HDGFP51858 240 aaKnown RBP25.15■■□□□ 1.62
PCGF3-211ENST00000484141 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.15■■□□□ 1.62
PCGF3-211ENST00000484141 TRPM2O94759 1503 aa25.13■■□□□ 1.61
PCGF3-211ENST00000484141 FOXD1Q16676 465 aa25.13■■□□□ 1.61
PCGF3-211ENST00000484141 ZNF326Q5BKZ1 582 aaKnown RBP25.12■■□□□ 1.61
PCGF3-211ENST00000484141 TBX22Q9Y458 520 aa25.12■■□□□ 1.61
PCGF3-211ENST00000484141 NRXN3Q9Y4C0 1643 aa25.11■■□□□ 1.61
PCGF3-211ENST00000484141 MEX3CQ5U5Q3 659 aaKnown RBP25.1■■□□□ 1.61
PCGF3-211ENST00000484141 SLC4A1APQ9BWU0 796 aaKnown RBP25.1■■□□□ 1.61
PCGF3-211ENST00000484141 COL16A1Q07092 1604 aaPredicted RBP25.09■■□□□ 1.61
PCGF3-211ENST00000484141 C14orf37Q86TY3 774 aa25.09■■□□□ 1.61
PCGF3-211ENST00000484141 SPATA31A6Q5VVP1 1343 aa25.09■■□□□ 1.61
PCGF3-211ENST00000484141 KIF1BO60333 1816 aa25.08■■□□□ 1.61
PCGF3-211ENST00000484141 PTPRUQ92729 1446 aa25.08■■□□□ 1.61
PCGF3-211ENST00000484141 LRP6O75581 1613 aa25.08■■□□□ 1.6
PCGF3-211ENST00000484141 ZNF772Q68DY9 489 aaPredicted RBP25.07■■□□□ 1.6
PCGF3-211ENST00000484141 NEXMIFQ5QGS0 1516 aa25.07■■□□□ 1.6
PCGF3-211ENST00000484141 UPF1Q92900 1129 aaKnown RBP eCLIP25.05■■□□□ 1.6
PCGF3-211ENST00000484141 DIP2AQ14689 1571 aa25.05■■□□□ 1.6
PCGF3-211ENST00000484141 NCOA3Q9Y6Q9 1424 aa25.04■■□□□ 1.6
PCGF3-211ENST00000484141 CADPS2Q86UW7 1296 aa25.02■■□□□ 1.6
PCGF3-211ENST00000484141 SETBP1Q9Y6X0 1596 aa25.01■■□□□ 1.59
PCGF3-211ENST00000484141 ATF3P18847 181 aa25.01■■□□□ 1.59
PCGF3-211ENST00000484141 AMOTL2Q9Y2J4 779 aa25.01■■□□□ 1.59
PCGF3-211ENST00000484141 METP08581 1390 aa25■■□□□ 1.59
PCGF3-211ENST00000484141 C19orf44Q9H6X5 657 aa24.99■■□□□ 1.59
PCGF3-211ENST00000484141 AHDC1Q5TGY3 1603 aaPredicted RBP24.98■■□□□ 1.59
PCGF3-211ENST00000484141 MPHOSPH9Q99550 1183 aa24.98■■□□□ 1.59
PCGF3-211ENST00000484141 PIK3R4Q99570 1358 aa24.97■■□□□ 1.59
PCGF3-211ENST00000484141 RXRBP28702 533 aa24.96■■□□□ 1.59
PCGF3-211ENST00000484141 XRN1Q8IZH2 1706 aaKnown RBP24.95■■□□□ 1.59
PCGF3-211ENST00000484141 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.95■■□□□ 1.59
PCGF3-211ENST00000484141 SHPRHQ149N8 1683 aa24.94■■□□□ 1.58
PCGF3-211ENST00000484141 NUTM2BA6NNL0 878 aaPredicted RBP24.93■■□□□ 1.58
PCGF3-211ENST00000484141 NUTM2EB1AL46 878 aaPredicted RBP24.93■■□□□ 1.58
PCGF3-211ENST00000484141 NUTM2AQ8IVF1 878 aaPredicted RBP24.93■■□□□ 1.58
PCGF3-211ENST00000484141 SETD5Q9C0A6 1442 aa24.93■■□□□ 1.58
PCGF3-211ENST00000484141 PPLO60437 1756 aa24.93■■□□□ 1.58
PCGF3-211ENST00000484141 BRINP3Q76B58 766 aa24.91■■□□□ 1.58
PCGF3-211ENST00000484141 RGL3Q3MIN7 710 aa24.88■■□□□ 1.57
PCGF3-211ENST00000484141 RAB3GAP2Q9H2M9 1393 aa24.88■■□□□ 1.57
PCGF3-211ENST00000484141 CDK12Q9NYV4 1490 aaPredicted RBP24.88■■□□□ 1.57
PCGF3-211ENST00000484141 AFF2P51816 1311 aa24.86■■□□□ 1.57
PCGF3-211ENST00000484141 VGFO15240 615 aaPredicted RBP24.86■■□□□ 1.57
PCGF3-211ENST00000484141 CCDC144AA2RUR9 1427 aa24.86■■□□□ 1.57
PCGF3-211ENST00000484141 ADGRF5Q8IZF2 1346 aa24.85■■□□□ 1.57
PCGF3-211ENST00000484141 SPATA31E1Q6ZUB1 1445 aa24.84■■□□□ 1.57
PCGF3-211ENST00000484141 RPGRIP1LQ68CZ1 1315 aa24.84■■□□□ 1.57
PCGF3-211ENST00000484141 DCCP43146 1447 aa24.83■■□□□ 1.57
PCGF3-211ENST00000484141 ASXL1Q8IXJ9 1541 aa24.82■■□□□ 1.56
PCGF3-211ENST00000484141 IFT172Q9UG01 1749 aa24.81■■□□□ 1.56
PCGF3-211ENST00000484141 NALCNQ8IZF0 1738 aa24.81■■□□□ 1.56
PCGF3-211ENST00000484141 ROBO2Q9HCK4 1378 aa24.79■■□□□ 1.56
PCGF3-211ENST00000484141 LRRC59Q96AG4 307 aaKnown RBP24.78■■□□□ 1.56
PCGF3-211ENST00000484141 C8orf37Q96NL8 207 aa24.78■■□□□ 1.56
PCGF3-211ENST00000484141 MST1RQ04912 1400 aa24.78■■□□□ 1.56
PCGF3-211ENST00000484141 RGS12O14924 1447 aa24.76■■□□□ 1.55
PCGF3-211ENST00000484141 RBM6P78332 1123 aaKnown RBP24.75■■□□□ 1.55
PCGF3-211ENST00000484141 QTRT2Q9H974 415 aaKnown RBP24.75■■□□□ 1.55
PCGF3-211ENST00000484141 ADGRL3Q9HAR2 1447 aa24.74■■□□□ 1.55
PCGF3-211ENST00000484141 NHSL1Q5SYE7 1610 aa24.73■■□□□ 1.55
PCGF3-211ENST00000484141 DDX17Q92841 729 aaKnown RBP24.73■■□□□ 1.55
PCGF3-211ENST00000484141 PNPLA6Q8IY17 1366 aa24.71■■□□□ 1.55
PCGF3-211ENST00000484141 PTCH1Q13635 1447 aa24.7■■□□□ 1.55
PCGF3-211ENST00000484141 TMEM132EQ6IEE7 984 aa24.7■■□□□ 1.54
PCGF3-211ENST00000484141 STK26Q9P289 416 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms