RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 LRP6O75581 1613 aa17.2■□□□□ 0.34
SMARCC1-205ENST00000483847 BCANQ96GW7 911 aa17.19■□□□□ 0.34
SMARCC1-205ENST00000483847 CHD2O14647 1828 aaKnown RBP17.19■□□□□ 0.34
SMARCC1-205ENST00000483847 CHIC2Q9UKJ5 165 aa17.18■□□□□ 0.34
SMARCC1-205ENST00000483847 MYO5BQ9ULV0 1848 aa17.18■□□□□ 0.34
SMARCC1-205ENST00000483847 ZFYVE9O95405 1425 aa17.17■□□□□ 0.34
SMARCC1-205ENST00000483847 LOC105371045A0A1W2PR82 267 aa17.16■□□□□ 0.34
SMARCC1-205ENST00000483847 UPF1Q92900 1129 aaKnown RBP eCLIP17.15■□□□□ 0.34
SMARCC1-205ENST00000483847 ANKRD30AQ9BXX3 1397 aa17.15■□□□□ 0.34
SMARCC1-205ENST00000483847 PLEKHG1Q9ULL1 1385 aa17.15■□□□□ 0.34
SMARCC1-205ENST00000483847 TRIM52Q96A61 297 aa17.14■□□□□ 0.33
SMARCC1-205ENST00000483847 SLC52A1Q9NWF4 448 aa17.14■□□□□ 0.33
SMARCC1-205ENST00000483847 GCC2Q8IWJ2 1684 aa17.13■□□□□ 0.33
SMARCC1-205ENST00000483847 FGD6Q6ZV73 1430 aa17.13■□□□□ 0.33
SMARCC1-205ENST00000483847 RIMS2Q9UQ26 1411 aa17.13■□□□□ 0.33
SMARCC1-205ENST00000483847 SPATA31A6Q5VVP1 1343 aa17.12■□□□□ 0.33
SMARCC1-205ENST00000483847 TMEM131LA2VDJ0 1609 aa17.11■□□□□ 0.33
SMARCC1-205ENST00000483847 MEX3CQ5U5Q3 659 aaKnown RBP17.11■□□□□ 0.33
SMARCC1-205ENST00000483847 AHDC1Q5TGY3 1603 aaPredicted RBP17.1■□□□□ 0.33
SMARCC1-205ENST00000483847 SHPRHQ149N8 1683 aa17.1■□□□□ 0.33
SMARCC1-205ENST00000483847 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.1■□□□□ 0.33
SMARCC1-205ENST00000483847 PPP1R15AO75807 674 aaPredicted RBP17.1■□□□□ 0.33
SMARCC1-205ENST00000483847 ZNF772Q68DY9 489 aaPredicted RBP17.09■□□□□ 0.33
SMARCC1-205ENST00000483847 C14orf37Q86TY3 774 aa17.09■□□□□ 0.33
SMARCC1-205ENST00000483847 RPRD2Q5VT52 1461 aaKnown RBP17.09■□□□□ 0.33
SMARCC1-205ENST00000483847 NCOA3Q9Y6Q9 1424 aa17.08■□□□□ 0.32
SMARCC1-205ENST00000483847 TBX22Q9Y458 520 aa17.08■□□□□ 0.32
SMARCC1-205ENST00000483847 ADAMTS13Q76LX8 1427 aa17.07■□□□□ 0.32
SMARCC1-205ENST00000483847 NUTM2DQ5VT03 806 aaPredicted RBP17.07■□□□□ 0.32
SMARCC1-205ENST00000483847 DIP2AQ14689 1571 aa17.06■□□□□ 0.32
SMARCC1-205ENST00000483847 ADGRL2O95490 1459 aa17.06■□□□□ 0.32
SMARCC1-205ENST00000483847 ATF3P18847 181 aa17.04■□□□□ 0.32
SMARCC1-205ENST00000483847 HDGFP51858 240 aaKnown RBP17.04■□□□□ 0.32
SMARCC1-205ENST00000483847 CADPS2Q86UW7 1296 aa17.04■□□□□ 0.32
SMARCC1-205ENST00000483847 C19orf44Q9H6X5 657 aa17.04■□□□□ 0.32
SMARCC1-205ENST00000483847 NUTM2BA6NNL0 878 aaPredicted RBP17.03■□□□□ 0.32
SMARCC1-205ENST00000483847 NUTM2EB1AL46 878 aaPredicted RBP17.03■□□□□ 0.32
SMARCC1-205ENST00000483847 CHGAP10645 457 aaKnown RBP17.03■□□□□ 0.32
SMARCC1-205ENST00000483847 RXRBP28702 533 aa17.03■□□□□ 0.32
SMARCC1-205ENST00000483847 BRINP3Q76B58 766 aa17.03■□□□□ 0.32
SMARCC1-205ENST00000483847 NUTM2AQ8IVF1 878 aaPredicted RBP17.03■□□□□ 0.32
SMARCC1-205ENST00000483847 ANKRD50Q9ULJ7 1429 aa17.03■□□□□ 0.32
SMARCC1-205ENST00000483847 CDK12Q9NYV4 1490 aaPredicted RBP17.01■□□□□ 0.31
SMARCC1-205ENST00000483847 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.01■□□□□ 0.31
SMARCC1-205ENST00000483847 PTPRUQ92729 1446 aa17.01■□□□□ 0.31
SMARCC1-205ENST00000483847 APLP2Q06481 763 aa17■□□□□ 0.31
SMARCC1-205ENST00000483847 E9PCH4 1651 aa17■□□□□ 0.31
SMARCC1-205ENST00000483847 PIK3R4Q99570 1358 aa17■□□□□ 0.31
SMARCC1-205ENST00000483847 AFF2P51816 1311 aa16.99■□□□□ 0.31
SMARCC1-205ENST00000483847 AMOTL2Q9Y2J4 779 aa16.99■□□□□ 0.31
SMARCC1-205ENST00000483847 ASXL1Q8IXJ9 1541 aa16.99■□□□□ 0.31
SMARCC1-205ENST00000483847 UNC13BO14795 1591 aa16.98■□□□□ 0.31
SMARCC1-205ENST00000483847 TRPM2O94759 1503 aa16.98■□□□□ 0.31
SMARCC1-205ENST00000483847 SRCAPQ6ZRS2 3230 aa16.98■□□□□ 0.31
SMARCC1-205ENST00000483847 FAM50AQ14320 339 aaKnown RBP16.97■□□□□ 0.31
SMARCC1-205ENST00000483847 NHSL1Q5SYE7 1610 aa16.96■□□□□ 0.31
SMARCC1-205ENST00000483847 XRN1Q8IZH2 1706 aaKnown RBP16.96■□□□□ 0.3
SMARCC1-205ENST00000483847 RGS12O14924 1447 aa16.96■□□□□ 0.3
SMARCC1-205ENST00000483847 SETD5Q9C0A6 1442 aa16.96■□□□□ 0.3
SMARCC1-205ENST00000483847 NRXN3Q9Y4C0 1643 aa16.95■□□□□ 0.3
SMARCC1-205ENST00000483847 DCCP43146 1447 aa16.95■□□□□ 0.3
SMARCC1-205ENST00000483847 MST1RQ04912 1400 aa16.95■□□□□ 0.3
SMARCC1-205ENST00000483847 DDX17Q92841 729 aaKnown RBP16.94■□□□□ 0.3
SMARCC1-205ENST00000483847 C8orf37Q96NL8 207 aa16.92■□□□□ 0.3
SMARCC1-205ENST00000483847 IQGAP3Q86VI3 1631 aa16.92■□□□□ 0.3
SMARCC1-205ENST00000483847 QTRT2Q9H974 415 aaKnown RBP16.91■□□□□ 0.3
SMARCC1-205ENST00000483847 PNPLA6Q8IY17 1366 aa16.9■□□□□ 0.3
SMARCC1-205ENST00000483847 RBM6P78332 1123 aaKnown RBP16.9■□□□□ 0.3
SMARCC1-205ENST00000483847 LRRC59Q96AG4 307 aaKnown RBP16.9■□□□□ 0.3
SMARCC1-205ENST00000483847 SETBP1Q9Y6X0 1596 aa16.89■□□□□ 0.3
SMARCC1-205ENST00000483847 METP08581 1390 aa16.89■□□□□ 0.29
SMARCC1-205ENST00000483847 NALCNQ8IZF0 1738 aa16.87■□□□□ 0.29
SMARCC1-205ENST00000483847 ADGRL3Q9HAR2 1447 aa16.86■□□□□ 0.29
SMARCC1-205ENST00000483847 ADAMTS2O95450 1211 aa16.85■□□□□ 0.29
SMARCC1-205ENST00000483847 NUP155O75694 1391 aa16.85■□□□□ 0.29
SMARCC1-205ENST00000483847 NGLY1Q96IV0 654 aa16.84■□□□□ 0.29
SMARCC1-205ENST00000483847 SPHKAPQ2M3C7 1700 aa16.82■□□□□ 0.28
SMARCC1-205ENST00000483847 ROCK1Q13464 1354 aa16.81■□□□□ 0.28
SMARCC1-205ENST00000483847 ZNF326Q5BKZ1 582 aaKnown RBP16.81■□□□□ 0.28
SMARCC1-205ENST00000483847 LAMC1P11047 1609 aa16.81■□□□□ 0.28
SMARCC1-205ENST00000483847 C1orf167Q5SNV9 1468 aa16.8■□□□□ 0.28
SMARCC1-205ENST00000483847 ATAD2Q6PL18 1390 aa16.8■□□□□ 0.28
SMARCC1-205ENST00000483847 EP400Q96L91 3159 aa16.79■□□□□ 0.28
SMARCC1-205ENST00000483847 USP21Q9UK80 565 aa16.79■□□□□ 0.28
SMARCC1-205ENST00000483847 NEXMIFQ5QGS0 1516 aa16.79■□□□□ 0.28
SMARCC1-205ENST00000483847 ORAI2Q96SN7 254 aa16.78■□□□□ 0.28
SMARCC1-205ENST00000483847 SOS2Q07890 1332 aaPredicted RBP16.77■□□□□ 0.28
SMARCC1-205ENST00000483847 CLTCL1P53675 1640 aa16.77■□□□□ 0.27
SMARCC1-205ENST00000483847 FNBP4Q8N3X1 1017 aaPredicted RBP16.75■□□□□ 0.27
SMARCC1-205ENST00000483847 TRPC5Q9UL62 973 aaPredicted RBP16.75■□□□□ 0.27
SMARCC1-205ENST00000483847 ATRNO75882 1429 aa16.75■□□□□ 0.27
SMARCC1-205ENST00000483847 PTCH1Q13635 1447 aa16.74■□□□□ 0.27
SMARCC1-205ENST00000483847 ITGAEP38570 1179 aa16.74■□□□□ 0.27
SMARCC1-205ENST00000483847 ROBO2Q9HCK4 1378 aa16.74■□□□□ 0.27
SMARCC1-205ENST00000483847 COL22A1Q8NFW1 1626 aaPredicted RBP16.74■□□□□ 0.27
SMARCC1-205ENST00000483847 ZRANB1Q9UGI0 708 aa16.73■□□□□ 0.27
SMARCC1-205ENST00000483847 MYOM2P54296 1465 aa16.7■□□□□ 0.26
SMARCC1-205ENST00000483847 BCL9LQ86UU0 1499 aa16.7■□□□□ 0.26
SMARCC1-205ENST00000483847 KIF1BO60333 1816 aa16.69■□□□□ 0.26
SMARCC1-205ENST00000483847 MARF1Q9Y4F3 1742 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms