RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 NOS1P29475 1434 aa12.23□□□□□ -0.45
CDC42SE1-204ENST00000483763 CNGB1Q14028 1251 aaPredicted RBP12.22□□□□□ -0.45
CDC42SE1-204ENST00000483763 CFAP70Q5T0N1 1121 aa12.22□□□□□ -0.45
CDC42SE1-204ENST00000483763 STAC3Q96MF2 364 aa12.22□□□□□ -0.45
CDC42SE1-204ENST00000483763 CAMSAP1Q5T5Y3 1602 aa12.22□□□□□ -0.45
CDC42SE1-204ENST00000483763 MROH2AA6NES4 1674 aa12.22□□□□□ -0.45
CDC42SE1-204ENST00000483763 NEURL4Q96JN8 1562 aa12.22□□□□□ -0.45
CDC42SE1-204ENST00000483763 ERICH6Q7L0X2 663 aa12.22□□□□□ -0.45
CDC42SE1-204ENST00000483763 RIMS1Q86UR5 1692 aaKnown RBP12.22□□□□□ -0.45
CDC42SE1-204ENST00000483763 DISP3Q9P2K9 1392 aa12.22□□□□□ -0.45
CDC42SE1-204ENST00000483763 LAMC1P11047 1609 aa12.21□□□□□ -0.45
CDC42SE1-204ENST00000483763 PTPRMP28827 1452 aa12.21□□□□□ -0.45
CDC42SE1-204ENST00000483763 ADGRB3O60242 1522 aa12.21□□□□□ -0.46
CDC42SE1-204ENST00000483763 IDI1Q13907 227 aa12.21□□□□□ -0.46
CDC42SE1-204ENST00000483763 FBXO31Q5XUX0 539 aaPredicted RBP12.21□□□□□ -0.46
CDC42SE1-204ENST00000483763 ADAMTSL3P82987 1691 aa12.21□□□□□ -0.46
CDC42SE1-204ENST00000483763 REREQ9P2R6 1566 aa12.2□□□□□ -0.46
CDC42SE1-204ENST00000483763 KCNA4P22459 653 aa12.2□□□□□ -0.46
CDC42SE1-204ENST00000483763 KIF1BO60333 1816 aa12.2□□□□□ -0.46
CDC42SE1-204ENST00000483763 ARHGAP31Q2M1Z3 1444 aa12.2□□□□□ -0.46
CDC42SE1-204ENST00000483763 SYNMO15061 1565 aa12.2□□□□□ -0.46
CDC42SE1-204ENST00000483763 NUTM2DQ5VT03 806 aaPredicted RBP12.19□□□□□ -0.46
CDC42SE1-204ENST00000483763 MYOM2P54296 1465 aa12.19□□□□□ -0.46
CDC42SE1-204ENST00000483763 AGLP35573 1532 aa12.19□□□□□ -0.46
CDC42SE1-204ENST00000483763 ZC3H13Q5T200 1668 aaKnown RBP12.18□□□□□ -0.46
CDC42SE1-204ENST00000483763 NRXN1Q9ULB1 1477 aa12.18□□□□□ -0.46
CDC42SE1-204ENST00000483763 ESF1Q9H501 851 aaKnown RBP12.18□□□□□ -0.46
CDC42SE1-204ENST00000483763 IFT172Q9UG01 1749 aa12.17□□□□□ -0.46
CDC42SE1-204ENST00000483763 PHF23Q9BUL5 403 aaPredicted RBP12.16□□□□□ -0.46
CDC42SE1-204ENST00000483763 SCAF11Q99590 1463 aaKnown RBP12.16□□□□□ -0.46
CDC42SE1-204ENST00000483763 PIK3C2BO00750 1634 aa12.16□□□□□ -0.46
CDC42SE1-204ENST00000483763 IQGAP1P46940 1657 aa12.15□□□□□ -0.46
CDC42SE1-204ENST00000483763 PER1O15534 1290 aaPredicted RBP12.15□□□□□ -0.46
CDC42SE1-204ENST00000483763 TMF1P82094 1093 aa12.15□□□□□ -0.46
CDC42SE1-204ENST00000483763 FER1L4A9Z1Z3 1794 aa12.14□□□□□ -0.47
CDC42SE1-204ENST00000483763 PIK3C2GO75747 1445 aa12.14□□□□□ -0.47
CDC42SE1-204ENST00000483763 CLTCQ00610 1675 aaKnown RBP12.14□□□□□ -0.47
CDC42SE1-204ENST00000483763 SENP3Q9H4L4 574 aaPredicted RBP12.14□□□□□ -0.47
CDC42SE1-204ENST00000483763 MRS2Q9HD23 443 aa12.14□□□□□ -0.47
CDC42SE1-204ENST00000483763 SLC52A1Q9NWF4 448 aa12.14□□□□□ -0.47
CDC42SE1-204ENST00000483763 PPP6R1Q9UPN7 881 aa12.14□□□□□ -0.47
CDC42SE1-204ENST00000483763 TMEM132EQ6IEE7 984 aa12.13□□□□□ -0.47
CDC42SE1-204ENST00000483763 C14orf93Q9H972 538 aaKnown RBP12.13□□□□□ -0.47
CDC42SE1-204ENST00000483763 RPGRIP1LQ68CZ1 1315 aa12.12□□□□□ -0.47
CDC42SE1-204ENST00000483763 PPLO60437 1756 aa12.12□□□□□ -0.47
CDC42SE1-204ENST00000483763 KIAA1210Q9ULL0 1709 aa12.12□□□□□ -0.47
CDC42SE1-204ENST00000483763 PANK3Q9H999 370 aa12.12□□□□□ -0.47
CDC42SE1-204ENST00000483763 PREX1Q8TCU6 1659 aa12.12□□□□□ -0.47
CDC42SE1-204ENST00000483763 FAM9BQ8IZU0 186 aa12.12□□□□□ -0.47
CDC42SE1-204ENST00000483763 NEXMIFQ5QGS0 1516 aa12.11□□□□□ -0.47
CDC42SE1-204ENST00000483763 ERVK-7P63135 1459 aa12.11□□□□□ -0.47
CDC42SE1-204ENST00000483763 ZMYM3Q14202 1370 aa12.11□□□□□ -0.47
CDC42SE1-204ENST00000483763 HNRNPUQ00839 825 aaKnown RBP eCLIP12.1□□□□□ -0.47
CDC42SE1-204ENST00000483763 TRAK1Q9UPV9 953 aa12.1□□□□□ -0.47
CDC42SE1-204ENST00000483763 VGFO15240 615 aaPredicted RBP12.1□□□□□ -0.47
CDC42SE1-204ENST00000483763 ADGRB1O14514 1584 aa12.09□□□□□ -0.47
CDC42SE1-204ENST00000483763 TMEM131LA2VDJ0 1609 aa12.08□□□□□ -0.47
CDC42SE1-204ENST00000483763 EIF3AQ14152 1382 aaKnown RBP12.08□□□□□ -0.48
CDC42SE1-204ENST00000483763 MYO5BQ9ULV0 1848 aa12.08□□□□□ -0.48
CDC42SE1-204ENST00000483763 C3P01024 1663 aa12.07□□□□□ -0.48
CDC42SE1-204ENST00000483763 SETBP1Q9Y6X0 1596 aa12.06□□□□□ -0.48
CDC42SE1-204ENST00000483763 CC2D1BQ5T0F9 858 aaKnown RBP12.06□□□□□ -0.48
CDC42SE1-204ENST00000483763 STAG3Q9UJ98 1225 aa12.06□□□□□ -0.48
CDC42SE1-204ENST00000483763 AMER1Q5JTC6 1135 aaPredicted RBP12.05□□□□□ -0.48
CDC42SE1-204ENST00000483763 PARD3Q8TEW0 1356 aa12.05□□□□□ -0.48
CDC42SE1-204ENST00000483763 ZFYVE9O95405 1425 aa12.05□□□□□ -0.48
CDC42SE1-204ENST00000483763 RALBP1Q15311 655 aa12.05□□□□□ -0.48
CDC42SE1-204ENST00000483763 LMTK3Q96Q04 1460 aa12.05□□□□□ -0.48
CDC42SE1-204ENST00000483763 CENPJQ9HC77 1338 aaPredicted RBP12.05□□□□□ -0.48
CDC42SE1-204ENST00000483763 SPATA31D1Q6ZQQ2 1576 aa12.04□□□□□ -0.48
CDC42SE1-204ENST00000483763 PNISRQ8TF01 805 aaKnown RBP12.04□□□□□ -0.48
CDC42SE1-204ENST00000483763 MYBBP1AQ9BQG0 1328 aaKnown RBP12.04□□□□□ -0.48
CDC42SE1-204ENST00000483763 CDCA8Q53HL2 280 aa12.04□□□□□ -0.48
CDC42SE1-204ENST00000483763 KTN1Q86UP2 1357 aaKnown RBP12.03□□□□□ -0.48
CDC42SE1-204ENST00000483763 TMC1Q8TDI8 760 aa12.03□□□□□ -0.48
CDC42SE1-204ENST00000483763 SBNO2Q9Y2G9 1366 aa12.03□□□□□ -0.48
CDC42SE1-204ENST00000483763 SENP3-EIF4A1A0A087X0R7 540 aa12.03□□□□□ -0.48
CDC42SE1-204ENST00000483763 A2ML1A8K2U0 1454 aa12.02□□□□□ -0.48
CDC42SE1-204ENST00000483763 NCKAP5LQ9HCH0 1330 aa12.02□□□□□ -0.49
CDC42SE1-204ENST00000483763 ASXL1Q8IXJ9 1541 aa12.02□□□□□ -0.49
CDC42SE1-204ENST00000483763 STK26Q9P289 416 aa12.01□□□□□ -0.49
CDC42SE1-204ENST00000483763 MYO3AQ8NEV4 1616 aa12.01□□□□□ -0.49
CDC42SE1-204ENST00000483763 MYOM1P52179 1685 aa12.01□□□□□ -0.49
CDC42SE1-204ENST00000483763 SAFB2Q14151 953 aaKnown RBP eCLIP12.01□□□□□ -0.49
CDC42SE1-204ENST00000483763 CARD14Q9BXL6 1004 aa12.01□□□□□ -0.49
CDC42SE1-204ENST00000483763 KNSTRNQ9Y448 316 aa12□□□□□ -0.49
CDC42SE1-204ENST00000483763 BRD4O60885 1362 aaPredicted RBP12□□□□□ -0.49
CDC42SE1-204ENST00000483763 NLRP13Q86W25 1043 aa11.99□□□□□ -0.49
CDC42SE1-204ENST00000483763 TNRQ92752 1358 aa11.99□□□□□ -0.49
CDC42SE1-204ENST00000483763 SETD1BQ9UPS6 1966 aaKnown RBP11.98□□□□□ -0.49
CDC42SE1-204ENST00000483763 SLC12A5Q9H2X9 1139 aa11.98□□□□□ -0.49
CDC42SE1-204ENST00000483763 KDM5AP29375 1690 aaKnown RBP11.98□□□□□ -0.49
CDC42SE1-204ENST00000483763 RIMS2Q9UQ26 1411 aa11.97□□□□□ -0.49
CDC42SE1-204ENST00000483763 QRICH2Q9H0J4 1663 aa11.97□□□□□ -0.49
CDC42SE1-204ENST00000483763 SUPT16HQ9Y5B9 1047 aaKnown RBP11.97□□□□□ -0.49
CDC42SE1-204ENST00000483763 LRPPRCP42704 1394 aaKnown RBP11.97□□□□□ -0.49
CDC42SE1-204ENST00000483763 ALKQ9UM73 1620 aa11.97□□□□□ -0.49
CDC42SE1-204ENST00000483763 ZBED9Q6R2W3 1325 aa11.96□□□□□ -0.49
CDC42SE1-204ENST00000483763 ARHGEF28Q8N1W1 1705 aaKnown RBP11.96□□□□□ -0.49
CDC42SE1-204ENST00000483763 PRAM1Q96QH2 718 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms