RNA–Protein interactions for RNA: ENST00000483671.1

RFTN1-209, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 2

Gene RFTN1, Length 1,314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-209ENST00000483671 CHGAP10645 457 aaKnown RBP22.92■■□□□ 1.26
RFTN1-209ENST00000483671 HSPA5P11021 654 aaKnown RBP22.91■■□□□ 1.26
RFTN1-209ENST00000483671 A2ML1A8K2U0 1454 aa22.91■■□□□ 1.26
RFTN1-209ENST00000483671 NLRP1Q9C000 1473 aa22.91■■□□□ 1.26
RFTN1-209ENST00000483671 USP47Q96K76 1375 aa22.9■■□□□ 1.26
RFTN1-209ENST00000483671 PIK3C2GO75747 1445 aa22.89■■□□□ 1.26
RFTN1-209ENST00000483671 CARD11Q9BXL7 1154 aa22.88■■□□□ 1.25
RFTN1-209ENST00000483671 ADGRF5Q8IZF2 1346 aa22.88■■□□□ 1.25
RFTN1-209ENST00000483671 MYO5BQ9ULV0 1848 aa22.87■■□□□ 1.25
RFTN1-209ENST00000483671 VGFO15240 615 aaPredicted RBP22.86■■□□□ 1.25
RFTN1-209ENST00000483671 NBPF1Q3BBV0 1214 aa22.84■■□□□ 1.25
RFTN1-209ENST00000483671 SETBP1Q9Y6X0 1596 aa22.83■■□□□ 1.25
RFTN1-209ENST00000483671 RIMS1Q86UR5 1692 aaKnown RBP22.83■■□□□ 1.25
RFTN1-209ENST00000483671 CEBPAP49715 358 aaPredicted RBP22.82■■□□□ 1.24
RFTN1-209ENST00000483671 STAG3Q9UJ98 1225 aa22.82■■□□□ 1.24
RFTN1-209ENST00000483671 UBR1Q8IWV7 1749 aa22.81■■□□□ 1.24
RFTN1-209ENST00000483671 DIEXFQ68CQ4 756 aaKnown RBP22.81■■□□□ 1.24
RFTN1-209ENST00000483671 C14orf93Q9H972 538 aaKnown RBP22.81■■□□□ 1.24
RFTN1-209ENST00000483671 HIRIP3Q9BW71 556 aaPredicted RBP22.8■■□□□ 1.24
RFTN1-209ENST00000483671 IQGAP1P46940 1657 aa22.79■■□□□ 1.24
RFTN1-209ENST00000483671 SCAF11Q99590 1463 aaKnown RBP22.78■■□□□ 1.24
RFTN1-209ENST00000483671 RIMS2Q9UQ26 1411 aa22.78■■□□□ 1.24
RFTN1-209ENST00000483671 CFAP70Q5T0N1 1121 aa22.77■■□□□ 1.24
RFTN1-209ENST00000483671 ADGRB1O14514 1584 aa22.76■■□□□ 1.23
RFTN1-209ENST00000483671 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.76■■□□□ 1.23
RFTN1-209ENST00000483671 MYO3AQ8NEV4 1616 aa22.76■■□□□ 1.23
RFTN1-209ENST00000483671 TMEM2Q9UHN6 1383 aa22.74■■□□□ 1.23
RFTN1-209ENST00000483671 POLR1AO95602 1720 aaPredicted RBP22.74■■□□□ 1.23
RFTN1-209ENST00000483671 HDGFP51858 240 aaKnown RBP22.73■■□□□ 1.23
RFTN1-209ENST00000483671 SLIT1O75093 1534 aa22.72■■□□□ 1.23
RFTN1-209ENST00000483671 ST20-MTHFSA0A0A6YYL1 179 aa22.72■■□□□ 1.23
RFTN1-209ENST00000483671 ARHGAP23Q9P227 1491 aa22.72■■□□□ 1.23
RFTN1-209ENST00000483671 WASHC2AQ641Q2 1341 aa22.71■■□□□ 1.23
RFTN1-209ENST00000483671 EIF3AQ14152 1382 aaKnown RBP22.71■■□□□ 1.23
RFTN1-209ENST00000483671 CCDC7Q96M83 1385 aa22.71■■□□□ 1.23
RFTN1-209ENST00000483671 PTPRMP28827 1452 aa22.7■■□□□ 1.22
RFTN1-209ENST00000483671 SETD1BQ9UPS6 1966 aaKnown RBP22.69■■□□□ 1.22
RFTN1-209ENST00000483671 ZNF142P52746 1687 aaPredicted RBP22.68■■□□□ 1.22
RFTN1-209ENST00000483671 CEP170BQ9Y4F5 1589 aaPredicted RBP22.68■■□□□ 1.22
RFTN1-209ENST00000483671 C11orf95C9JLR9 678 aaPredicted RBP22.67■■□□□ 1.22
RFTN1-209ENST00000483671 NUTM2DQ5VT03 806 aaPredicted RBP22.67■■□□□ 1.22
RFTN1-209ENST00000483671 TESK2Q96S53 571 aa22.67■■□□□ 1.22
RFTN1-209ENST00000483671 ALKQ9UM73 1620 aa22.67■■□□□ 1.22
RFTN1-209ENST00000483671 KIF7Q2M1P5 1343 aa22.66■■□□□ 1.22
RFTN1-209ENST00000483671 ASXL1Q8IXJ9 1541 aa22.66■■□□□ 1.22
RFTN1-209ENST00000483671 THEMISQ8N1K5 641 aaPredicted RBP22.65■■□□□ 1.22
RFTN1-209ENST00000483671 NRXN3Q9Y4C0 1643 aa22.64■■□□□ 1.22
RFTN1-209ENST00000483671 SBNO2Q9Y2G9 1366 aa22.64■■□□□ 1.21
RFTN1-209ENST00000483671 SLC24A1O60721 1099 aa22.63■■□□□ 1.21
RFTN1-209ENST00000483671 SETD1AO15047 1707 aaKnown RBP22.63■■□□□ 1.21
RFTN1-209ENST00000483671 PLEKHG1Q9ULL1 1385 aa22.63■■□□□ 1.21
RFTN1-209ENST00000483671 DDX10Q13206 875 aaKnown RBP22.61■■□□□ 1.21
RFTN1-209ENST00000483671 PLPPR3Q6T4P5 718 aa22.59■■□□□ 1.21
RFTN1-209ENST00000483671 EID1Q9Y6B2 187 aa22.58■■□□□ 1.21
RFTN1-209ENST00000483671 TMEM132EQ6IEE7 984 aa22.57■■□□□ 1.2
RFTN1-209ENST00000483671 AEBP2Q6ZN18 517 aaPredicted RBP22.57■■□□□ 1.2
RFTN1-209ENST00000483671 YTHDC2Q9H6S0 1430 aaKnown RBP22.57■■□□□ 1.2
RFTN1-209ENST00000483671 MED14O60244 1454 aa22.57■■□□□ 1.2
RFTN1-209ENST00000483671 LTKP29376 864 aa22.57■■□□□ 1.2
RFTN1-209ENST00000483671 TMF1P82094 1093 aa22.57■■□□□ 1.2
RFTN1-209ENST00000483671 ARHGEF28Q8N1W1 1705 aaKnown RBP22.56■■□□□ 1.2
RFTN1-209ENST00000483671 ADAMTS13Q76LX8 1427 aa22.56■■□□□ 1.2
RFTN1-209ENST00000483671 TXNDC2Q86VQ3 553 aa22.56■■□□□ 1.2
RFTN1-209ENST00000483671 DLC1Q96QB1 1528 aa22.55■■□□□ 1.2
RFTN1-209ENST00000483671 LRPPRCP42704 1394 aaKnown RBP22.55■■□□□ 1.2
RFTN1-209ENST00000483671 DISP3Q9P2K9 1392 aa22.55■■□□□ 1.2
RFTN1-209ENST00000483671 CENPJQ9HC77 1338 aaPredicted RBP22.55■■□□□ 1.2
RFTN1-209ENST00000483671 TRAK1Q9UPV9 953 aa22.53■■□□□ 1.2
RFTN1-209ENST00000483671 ABCC11Q96J66 1382 aa22.52■■□□□ 1.2
RFTN1-209ENST00000483671 DIP2AQ14689 1571 aa22.52■■□□□ 1.2
RFTN1-209ENST00000483671 CDCA8Q53HL2 280 aa22.52■■□□□ 1.2
RFTN1-209ENST00000483671 TECPR2O15040 1411 aa22.51■■□□□ 1.19
RFTN1-209ENST00000483671 METP08581 1390 aa22.49■■□□□ 1.19
RFTN1-209ENST00000483671 QRICH2Q9H0J4 1663 aa22.49■■□□□ 1.19
RFTN1-209ENST00000483671 KNDC1Q76NI1 1749 aa22.49■■□□□ 1.19
RFTN1-209ENST00000483671 SIRT1Q96EB6 747 aa22.48■■□□□ 1.19
RFTN1-209ENST00000483671 TBX22Q9Y458 520 aa22.48■■□□□ 1.19
RFTN1-209ENST00000483671 KDM4FA0A1W2PPD8 638 aa22.47■■□□□ 1.19
RFTN1-209ENST00000483671 MIER1Q8N108 512 aa22.46■■□□□ 1.19
RFTN1-209ENST00000483671 PUS7Q96PZ0 661 aaKnown RBP22.46■■□□□ 1.19
RFTN1-209ENST00000483671 ANKLE2Q86XL3 938 aa22.45■■□□□ 1.18
RFTN1-209ENST00000483671 CPS1P31327 1500 aa22.45■■□□□ 1.18
RFTN1-209ENST00000483671 FAM135BQ49AJ0 1406 aa22.45■■□□□ 1.18
RFTN1-209ENST00000483671 STK26Q9P289 416 aa22.43■■□□□ 1.18
RFTN1-209ENST00000483671 PIK3R4Q99570 1358 aa22.42■■□□□ 1.18
RFTN1-209ENST00000483671 BCANQ96GW7 911 aa22.41■■□□□ 1.18
RFTN1-209ENST00000483671 PRAM1Q96QH2 718 aa22.4■■□□□ 1.18
RFTN1-209ENST00000483671 SENP3Q9H4L4 574 aaPredicted RBP22.4■■□□□ 1.18
RFTN1-209ENST00000483671 TULP4Q9NRJ4 1543 aa22.39■■□□□ 1.17
RFTN1-209ENST00000483671 POLR3GLQ9BT43 218 aa22.38■■□□□ 1.17
RFTN1-209ENST00000483671 EVC2Q86UK5 1308 aa22.38■■□□□ 1.17
RFTN1-209ENST00000483671 ANP32CO43423 234 aa22.37■■□□□ 1.17
RFTN1-209ENST00000483671 PTCH1Q13635 1447 aa22.37■■□□□ 1.17
RFTN1-209ENST00000483671 SLC26A8Q96RN1 970 aa22.36■■□□□ 1.17
RFTN1-209ENST00000483671 POGKQ9P215 609 aa22.36■■□□□ 1.17
RFTN1-209ENST00000483671 MYOM1P52179 1685 aa22.36■■□□□ 1.17
RFTN1-209ENST00000483671 PTPRUQ92729 1446 aa22.36■■□□□ 1.17
RFTN1-209ENST00000483671 NPHP4O75161 1426 aaPredicted RBP22.35■■□□□ 1.17
RFTN1-209ENST00000483671 XRN1Q8IZH2 1706 aaKnown RBP22.35■■□□□ 1.17
RFTN1-209ENST00000483671 ROBO2Q9HCK4 1378 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms