RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 NLRP1Q9C000 1473 aa15.19■□□□□ 0.02
VTI1A-205ENST00000483122 MAP3K4Q9Y6R4 1608 aa15.19■□□□□ 0.02
VTI1A-205ENST00000483122 MYO5CQ9NQX4 1742 aa15.19■□□□□ 0.02
VTI1A-205ENST00000483122 ADGBQ8N7X0 1667 aa15.18■□□□□ 0.02
VTI1A-205ENST00000483122 ITSN2Q9NZM3 1697 aa15.18■□□□□ 0.02
VTI1A-205ENST00000483122 PANK3Q9H999 370 aa15.17■□□□□ 0.02
VTI1A-205ENST00000483122 CDC42BPAQ5VT25 1732 aa15.16■□□□□ 0.02
VTI1A-205ENST00000483122 GOLGA2Q08379 1002 aa15.16■□□□□ 0.02
VTI1A-205ENST00000483122 FAM69CQ0P6D2 419 aa15.16■□□□□ 0.02
VTI1A-205ENST00000483122 ZNF521Q96K83 1311 aa15.16■□□□□ 0.02
VTI1A-205ENST00000483122 EIF3AQ14152 1382 aaKnown RBP15.16■□□□□ 0.02
VTI1A-205ENST00000483122 PREX2Q70Z35 1606 aa15.16■□□□□ 0.02
VTI1A-205ENST00000483122 CAMSAP2Q08AD1 1489 aa15.15■□□□□ 0.02
VTI1A-205ENST00000483122 SPRYD3Q8NCJ5 442 aa15.15■□□□□ 0.02
VTI1A-205ENST00000483122 TBC1D2Q9BYX2 928 aa15.15■□□□□ 0.02
VTI1A-205ENST00000483122 ARAP3Q8WWN8 1544 aa15.14■□□□□ 0.01
VTI1A-205ENST00000483122 DISP3Q9P2K9 1392 aa15.14■□□□□ 0.01
VTI1A-205ENST00000483122 BCAR3O75815 825 aa15.14■□□□□ 0.01
VTI1A-205ENST00000483122 MCM4P33991 863 aa15.14■□□□□ 0.01
VTI1A-205ENST00000483122 SLFN5Q08AF3 891 aa15.14■□□□□ 0.01
VTI1A-205ENST00000483122 CD109Q6YHK3 1445 aa15.13■□□□□ 0.01
VTI1A-205ENST00000483122 NUP155O75694 1391 aa15.13■□□□□ 0.01
VTI1A-205ENST00000483122 NBPF1Q3BBV0 1214 aa15.13■□□□□ 0.01
VTI1A-205ENST00000483122 CDC42BPBQ9Y5S2 1711 aa15.13■□□□□ 0.01
VTI1A-205ENST00000483122 ERBB4Q15303 1308 aa15.13■□□□□ 0.01
VTI1A-205ENST00000483122 GPATCH8Q9UKJ3 1502 aaKnown RBP15.13■□□□□ 0.01
VTI1A-205ENST00000483122 COL17A1Q9UMD9 1497 aaPredicted RBP15.13■□□□□ 0.01
VTI1A-205ENST00000483122 SPINK5Q9NQ38 1064 aaPredicted RBP15.12■□□□□ 0.01
VTI1A-205ENST00000483122 ADGRL2O95490 1459 aa15.12■□□□□ 0.01
VTI1A-205ENST00000483122 PLCH2O75038 1416 aa15.12■□□□□ 0.01
VTI1A-205ENST00000483122 ZNF777Q9ULD5 760 aaPredicted RBP15.12■□□□□ 0.01
VTI1A-205ENST00000483122 TRPM1Q7Z4N2 1603 aa15.12■□□□□ 0.01
VTI1A-205ENST00000483122 ANKRD50Q9ULJ7 1429 aa15.11■□□□□ 0.01
VTI1A-205ENST00000483122 TRHP20396 242 aaPredicted RBP15.11■□□□□ 0.01
VTI1A-205ENST00000483122 CFAP74Q9C0B2 1584 aa15.11■□□□□ 0.01
VTI1A-205ENST00000483122 TSPOAP1O95153 1857 aa15.11■□□□□ 0.01
VTI1A-205ENST00000483122 WDR43Q15061 677 aaKnown RBP eCLIP15.11■□□□□ 0.01
VTI1A-205ENST00000483122 MAPK8IP3Q9UPT6 1336 aa15.1■□□□□ 0.01
VTI1A-205ENST00000483122 CFDP1Q9UEE9 299 aaPredicted RBP15.1■□□□□ 0.01
VTI1A-205ENST00000483122 PPRC1Q5VV67 1664 aaKnown RBP15.1■□□□□ 0.01
VTI1A-205ENST00000483122 CROCC2H7BZ55 1655 aa15.1■□□□□ 0.01
VTI1A-205ENST00000483122 ARHGAP5Q13017 1502 aa15.1■□□□□ 0.01
VTI1A-205ENST00000483122 ESPNB1AK53 854 aa15.09■□□□□ 0.01
VTI1A-205ENST00000483122 TBC1D32Q96NH3 1257 aa15.09■□□□□ 0.01
VTI1A-205ENST00000483122 TESK2Q96S53 571 aa15.09■□□□□ 0.01
VTI1A-205ENST00000483122 KDM5DQ9BY66 1539 aa15.09■□□□□ 0.01
VTI1A-205ENST00000483122 TRAK2O60296 914 aa15.09■□□□□ 0.01
VTI1A-205ENST00000483122 MRE11P49959 708 aa15.09■□□□□ 0.01
VTI1A-205ENST00000483122 TRMT2AQ8IZ69 625 aaKnown RBP15.09■□□□□ 0.01
VTI1A-205ENST00000483122 ANKRD30AQ9BXX3 1397 aa15.09■□□□□ 0.01
VTI1A-205ENST00000483122 PRAG1Q86YV5 1406 aa15.08■□□□□ 0
VTI1A-205ENST00000483122 PPP2R1AP30153 589 aa15.07■□□□□ 0
VTI1A-205ENST00000483122 CCDC146Q8IYE0 955 aa15.07■□□□□ 0
VTI1A-205ENST00000483122 MYH16Q9H6N6 1097 aa15.07■□□□□ 0
VTI1A-205ENST00000483122 GRPEL1Q9HAV7 217 aa15.07■□□□□ 0
VTI1A-205ENST00000483122 FANCAO15360 1455 aa15.07■□□□□ 0
VTI1A-205ENST00000483122 NKTRP30414 1462 aaKnown RBP15.06■□□□□ 0
VTI1A-205ENST00000483122 CLUAP1Q96AJ1 413 aa15.06■□□□□ 0
VTI1A-205ENST00000483122 UPF2Q9HAU5 1272 aaKnown RBP15.06■□□□□ 0
VTI1A-205ENST00000483122 NEO1Q92859 1461 aa15.06■□□□□ 0
VTI1A-205ENST00000483122 ERBINQ96RT1 1412 aa15.05■□□□□ 0
VTI1A-205ENST00000483122 PANK1Q8TE04 598 aa15.05■□□□□ 0
VTI1A-205ENST00000483122 COG6Q9Y2V7 657 aa15.05■□□□□ 0
VTI1A-205ENST00000483122 EFCAB2Q5VUJ9 269 aa15.05■□□□□ -0
VTI1A-205ENST00000483122 CGNL1Q0VF96 1302 aa15.04■□□□□ -0
VTI1A-205ENST00000483122 SAMD9LQ8IVG5 1584 aa15.04■□□□□ -0
VTI1A-205ENST00000483122 RGL3Q3MIN7 710 aa15.04■□□□□ -0
VTI1A-205ENST00000483122 CHMP5Q9NZZ3 219 aa15.03■□□□□ -0
VTI1A-205ENST00000483122 DMRT2Q9Y5R5 561 aa15.03■□□□□ -0
VTI1A-205ENST00000483122 GPRASP1Q5JY77 1395 aa15.02■□□□□ -0
VTI1A-205ENST00000483122 APAF1O14727 1248 aa15.02□□□□□ -0.01
VTI1A-205ENST00000483122 TPM2P07951 284 aa15.02□□□□□ -0.01
VTI1A-205ENST00000483122 PRDM15P57071 1507 aaPredicted RBP15.02□□□□□ -0.01
VTI1A-205ENST00000483122 MAGI2Q86UL8 1455 aa15.02□□□□□ -0.01
VTI1A-205ENST00000483122 ABCC1P33527 1531 aa15.01□□□□□ -0.01
VTI1A-205ENST00000483122 TMF1P82094 1093 aa15.01□□□□□ -0.01
VTI1A-205ENST00000483122 PDE3AQ14432 1141 aa15.01□□□□□ -0.01
VTI1A-205ENST00000483122 PDCL3Q9H2J4 239 aa15□□□□□ -0.01
VTI1A-205ENST00000483122 PDZRN3Q9UPQ7 1066 aa15□□□□□ -0.01
VTI1A-205ENST00000483122 TRIM44Q96DX7 344 aaPredicted RBP15□□□□□ -0.01
VTI1A-205ENST00000483122 ADGRL1O94910 1474 aa14.99□□□□□ -0.01
VTI1A-205ENST00000483122 CANXP27824 592 aaKnown RBP14.99□□□□□ -0.01
VTI1A-205ENST00000483122 GAS2L3Q86XJ1 694 aa14.99□□□□□ -0.01
VTI1A-205ENST00000483122 PODXL2Q9NZ53 605 aa14.99□□□□□ -0.01
VTI1A-205ENST00000483122 KNSTRNQ9Y448 316 aa14.99□□□□□ -0.01
VTI1A-205ENST00000483122 E9PSI1 815 aa14.98□□□□□ -0.01
VTI1A-205ENST00000483122 PCDHB15Q9Y5E8 787 aa14.98□□□□□ -0.01
VTI1A-205ENST00000483122 CENPJQ9HC77 1338 aaPredicted RBP14.98□□□□□ -0.01
VTI1A-205ENST00000483122 RTEL1-TNFRSF6BF6WH68 1400 aa14.98□□□□□ -0.01
VTI1A-205ENST00000483122 AMER1Q5JTC6 1135 aaPredicted RBP14.97□□□□□ -0.01
VTI1A-205ENST00000483122 SYCP2Q9BX26 1530 aa14.97□□□□□ -0.01
VTI1A-205ENST00000483122 LAMC1P11047 1609 aa14.97□□□□□ -0.01
VTI1A-205ENST00000483122 C9orf84Q5VXU9 1444 aa14.97□□□□□ -0.01
VTI1A-205ENST00000483122 KIAA1211Q6ZU35 1233 aa14.97□□□□□ -0.01
VTI1A-205ENST00000483122 ZNF692Q9BU19 519 aaPredicted RBP14.97□□□□□ -0.01
VTI1A-205ENST00000483122 A2MP01023 1474 aa14.97□□□□□ -0.01
VTI1A-205ENST00000483122 ARHGEF5Q12774 1597 aa14.97□□□□□ -0.01
VTI1A-205ENST00000483122 TNNQ9UQP3 1299 aa14.96□□□□□ -0.01
VTI1A-205ENST00000483122 DDX11L8A8MPP1 907 aa14.96□□□□□ -0.01
VTI1A-205ENST00000483122 PMFBP1Q8TBY8 1022 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms