RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 WDR7Q9Y4E6 1490 aa16.19■□□□□ 0.18
CCDC78-213ENST00000482878 PLXNC1O60486 1568 aa16.19■□□□□ 0.18
CCDC78-213ENST00000482878 MYO5CQ9NQX4 1742 aa16.19■□□□□ 0.18
CCDC78-213ENST00000482878 PLEKHH1Q9ULM0 1364 aa16.18■□□□□ 0.18
CCDC78-213ENST00000482878 DUOX2Q9NRD8 1548 aa16.18■□□□□ 0.18
CCDC78-213ENST00000482878 KNSTRNQ9Y448 316 aa16.18■□□□□ 0.18
CCDC78-213ENST00000482878 ZMYND15Q9H091 742 aa16.17■□□□□ 0.18
CCDC78-213ENST00000482878 AMER1Q5JTC6 1135 aaPredicted RBP16.17■□□□□ 0.18
CCDC78-213ENST00000482878 DUSP27Q5VZP5 1158 aa16.17■□□□□ 0.18
CCDC78-213ENST00000482878 FAM43AQ8N2R8 423 aa16.16■□□□□ 0.18
CCDC78-213ENST00000482878 WDR43Q15061 677 aaKnown RBP eCLIP16.15■□□□□ 0.18
CCDC78-213ENST00000482878 KDM2BQ8NHM5 1336 aa16.15■□□□□ 0.18
CCDC78-213ENST00000482878 RNF17Q9BXT8 1623 aaKnown RBP16.14■□□□□ 0.17
CCDC78-213ENST00000482878 ARXQ96QS3 562 aa16.14■□□□□ 0.17
CCDC78-213ENST00000482878 NAP1L5Q96NT1 182 aaPredicted RBP16.14■□□□□ 0.17
CCDC78-213ENST00000482878 ZNF521Q96K83 1311 aa16.13■□□□□ 0.17
CCDC78-213ENST00000482878 GOLGA2Q08379 1002 aa16.11■□□□□ 0.17
CCDC78-213ENST00000482878 PLCH2O75038 1416 aa16.11■□□□□ 0.17
CCDC78-213ENST00000482878 TRAPPC8Q9Y2L5 1435 aa16.11■□□□□ 0.17
CCDC78-213ENST00000482878 EFCAB2Q5VUJ9 269 aa16.1■□□□□ 0.17
CCDC78-213ENST00000482878 AFAP1Q8N556 730 aa16.1■□□□□ 0.17
CCDC78-213ENST00000482878 ABCC2Q92887 1545 aa16.1■□□□□ 0.17
CCDC78-213ENST00000482878 ERCC6L2Q5T890 1561 aa16.1■□□□□ 0.17
CCDC78-213ENST00000482878 MADDQ8WXG6 1647 aa16.1■□□□□ 0.17
CCDC78-213ENST00000482878 CENPQQ7L2Z9 268 aaPredicted RBP16.09■□□□□ 0.17
CCDC78-213ENST00000482878 NPM1P06748 294 aaKnown RBP eCLIP16.09■□□□□ 0.17
CCDC78-213ENST00000482878 CCDC146Q8IYE0 955 aa16.09■□□□□ 0.17
CCDC78-213ENST00000482878 FRAT2O75474 233 aaPredicted RBP16.08■□□□□ 0.16
CCDC78-213ENST00000482878 CDCA8Q53HL2 280 aa16.08■□□□□ 0.16
CCDC78-213ENST00000482878 SCAF11Q99590 1463 aaKnown RBP16.08■□□□□ 0.16
CCDC78-213ENST00000482878 SLFN5Q08AF3 891 aa16.08■□□□□ 0.16
CCDC78-213ENST00000482878 PODXL2Q9NZ53 605 aa16.08■□□□□ 0.16
CCDC78-213ENST00000482878 PLPPR3Q6T4P5 718 aa16.07■□□□□ 0.16
CCDC78-213ENST00000482878 SPINK5Q9NQ38 1064 aaPredicted RBP16.07■□□□□ 0.16
CCDC78-213ENST00000482878 ASXL1Q8IXJ9 1541 aa16.06■□□□□ 0.16
CCDC78-213ENST00000482878 IQGAP1P46940 1657 aa16.06■□□□□ 0.16
CCDC78-213ENST00000482878 HSP90AA2PQ14568 343 aaPredicted RBP16.06■□□□□ 0.16
CCDC78-213ENST00000482878 PIK3C2GO75747 1445 aa16.06■□□□□ 0.16
CCDC78-213ENST00000482878 SYNMO15061 1565 aa16.05■□□□□ 0.16
CCDC78-213ENST00000482878 PLEKHG5O94827 1062 aa16.05■□□□□ 0.16
CCDC78-213ENST00000482878 NUTM2DQ5VT03 806 aaPredicted RBP16.05■□□□□ 0.16
CCDC78-213ENST00000482878 SCAPERQ9BY12 1400 aa16.05■□□□□ 0.16
CCDC78-213ENST00000482878 SPAG9O60271 1321 aaKnown RBP16.05■□□□□ 0.16
CCDC78-213ENST00000482878 SHROOM2Q13796 1616 aa16.05■□□□□ 0.16
CCDC78-213ENST00000482878 TRMT2AQ8IZ69 625 aaKnown RBP16.04■□□□□ 0.16
CCDC78-213ENST00000482878 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.04■□□□□ 0.16
CCDC78-213ENST00000482878 ABCC1P33527 1531 aa16.04■□□□□ 0.16
CCDC78-213ENST00000482878 APAF1O14727 1248 aa16.04■□□□□ 0.16
CCDC78-213ENST00000482878 C8orf34Q49A92 452 aa16.04■□□□□ 0.16
CCDC78-213ENST00000482878 TRPM2O94759 1503 aa16.04■□□□□ 0.16
CCDC78-213ENST00000482878 GGT6Q6P531 493 aa16.03■□□□□ 0.16
CCDC78-213ENST00000482878 PTPRTO14522 1441 aa16.03■□□□□ 0.16
CCDC78-213ENST00000482878 CHD1O14646 1710 aa16.03■□□□□ 0.16
CCDC78-213ENST00000482878 KIF3BO15066 747 aa16.03■□□□□ 0.16
CCDC78-213ENST00000482878 FAM161AQ3B820 660 aa16.03■□□□□ 0.16
CCDC78-213ENST00000482878 NPC1L1Q9UHC9 1359 aa16.02■□□□□ 0.16
CCDC78-213ENST00000482878 HSP90AA1P07900 732 aaKnown RBP16.02■□□□□ 0.15
CCDC78-213ENST00000482878 CLASP1Q7Z460 1538 aa16.02■□□□□ 0.15
CCDC78-213ENST00000482878 BCAR3O75815 825 aa16.02■□□□□ 0.15
CCDC78-213ENST00000482878 STAC3Q96MF2 364 aa16.02■□□□□ 0.15
CCDC78-213ENST00000482878 RGS3P49796 1198 aa16.01■□□□□ 0.15
CCDC78-213ENST00000482878 CLTCL1P53675 1640 aa16.01■□□□□ 0.15
CCDC78-213ENST00000482878 DMRT2Q9Y5R5 561 aa16■□□□□ 0.15
CCDC78-213ENST00000482878 SPHKAPQ2M3C7 1700 aa16■□□□□ 0.15
CCDC78-213ENST00000482878 RRAGDQ9NQL2 400 aaPredicted RBP16■□□□□ 0.15
CCDC78-213ENST00000482878 EIF3AQ14152 1382 aaKnown RBP15.99■□□□□ 0.15
CCDC78-213ENST00000482878 TNNT2P45379 298 aaPredicted RBP15.99■□□□□ 0.15
CCDC78-213ENST00000482878 CFAP70Q5T0N1 1121 aa15.99■□□□□ 0.15
CCDC78-213ENST00000482878 PNNQ9H307 717 aaKnown RBP15.99■□□□□ 0.15
CCDC78-213ENST00000482878 MYOM1P52179 1685 aa15.99■□□□□ 0.15
CCDC78-213ENST00000482878 CARD14Q9BXL6 1004 aa15.99■□□□□ 0.15
CCDC78-213ENST00000482878 NKTRP30414 1462 aaKnown RBP15.99■□□□□ 0.15
CCDC78-213ENST00000482878 RTEL1-TNFRSF6BF6WH68 1400 aa15.98■□□□□ 0.15
CCDC78-213ENST00000482878 SAFB2Q14151 953 aaKnown RBP eCLIP15.97■□□□□ 0.15
CCDC78-213ENST00000482878 ZFYVE16Q7Z3T8 1539 aa15.97■□□□□ 0.15
CCDC78-213ENST00000482878 ZCCHC11Q5TAX3 1644 aaKnown RBP15.97■□□□□ 0.15
CCDC78-213ENST00000482878 E9PSI1 815 aa15.96■□□□□ 0.15
CCDC78-213ENST00000482878 CEP152O94986 1710 aa15.96■□□□□ 0.15
CCDC78-213ENST00000482878 ADGRF5Q8IZF2 1346 aa15.96■□□□□ 0.15
CCDC78-213ENST00000482878 ERVK-7P63135 1459 aa15.95■□□□□ 0.14
CCDC78-213ENST00000482878 IGHDP01880 384 aa15.95■□□□□ 0.14
CCDC78-213ENST00000482878 POGKQ9P215 609 aa15.93■□□□□ 0.14
CCDC78-213ENST00000482878 KANK1Q14678 1352 aa15.93■□□□□ 0.14
CCDC78-213ENST00000482878 UGGT1Q9NYU2 1555 aa15.93■□□□□ 0.14
CCDC78-213ENST00000482878 KDM5AP29375 1690 aaKnown RBP15.92■□□□□ 0.14
CCDC78-213ENST00000482878 DEPDC5O75140 1603 aa15.92■□□□□ 0.14
CCDC78-213ENST00000482878 UHRF1BP1LA0JNW5 1464 aa15.91■□□□□ 0.14
CCDC78-213ENST00000482878 TET3O43151 1660 aa15.91■□□□□ 0.14
CCDC78-213ENST00000482878 WWC1Q8IX03 1113 aa15.91■□□□□ 0.14
CCDC78-213ENST00000482878 L1TD1Q5T7N2 865 aaKnown RBP15.9■□□□□ 0.14
CCDC78-213ENST00000482878 RRP9O43818 475 aaKnown RBP15.9■□□□□ 0.14
CCDC78-213ENST00000482878 PANK1Q8TE04 598 aa15.9■□□□□ 0.14
CCDC78-213ENST00000482878 VWDEQ8N2E2 1590 aa15.9■□□□□ 0.14
CCDC78-213ENST00000482878 CENPJQ9HC77 1338 aaPredicted RBP15.89■□□□□ 0.13
CCDC78-213ENST00000482878 SLC24A1O60721 1099 aa15.89■□□□□ 0.13
CCDC78-213ENST00000482878 COG6Q9Y2V7 657 aa15.89■□□□□ 0.13
CCDC78-213ENST00000482878 MLECQ14165 292 aa15.89■□□□□ 0.13
CCDC78-213ENST00000482878 PDE3AQ14432 1141 aa15.89■□□□□ 0.13
CCDC78-213ENST00000482878 KIAA1210Q9ULL0 1709 aa15.88■□□□□ 0.13
CCDC78-213ENST00000482878 CGNL1Q0VF96 1302 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms