RNA–Protein interactions for RNA: ENST00000482646.5

CREM-233, Transcript of cAMP responsive element modulator, human

TSL 3

Gene CREM, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CREM-233	ENST00000482646	SCAF11	Q99590	1463 aa	Known RBP	32.16	■■■□□ 2.74
CREM-233	ENST00000482646	PIP4K2B	P78356	416 aa		32.15	■■■□□ 2.74
CREM-233	ENST00000482646	ILDR2	Q71H61	639 aa		32.13	■■■□□ 2.73
CREM-233	ENST00000482646	TXNDC2	Q86VQ3	553 aa		32.12	■■■□□ 2.73
CREM-233	ENST00000482646	STAG3	Q9UJ98	1225 aa		32.12	■■■□□ 2.73
CREM-233	ENST00000482646	EID1	Q9Y6B2	187 aa		32.12	■■■□□ 2.73
CREM-233	ENST00000482646	SLIT1	O75093	1534 aa		32.11	■■■□□ 2.73
CREM-233	ENST00000482646	ARHGAP23	Q9P227	1491 aa		32.1	■■■□□ 2.73
CREM-233	ENST00000482646	SLC52A1	Q9NWF4	448 aa		32.1	■■■□□ 2.73
CREM-233	ENST00000482646	KDM5A	P29375	1690 aa	Known RBP	32.09	■■■□□ 2.73
CREM-233	ENST00000482646	ADGRB3	O60242	1522 aa		32.07	■■■□□ 2.72
CREM-233	ENST00000482646	LTK	P29376	864 aa		32.07	■■■□□ 2.72
CREM-233	ENST00000482646	MYO5B	Q9ULV0	1848 aa		32.07	■■■□□ 2.72
CREM-233	ENST00000482646	HSPA1L	P34931	641 aa		32.04	■■■□□ 2.72
CREM-233	ENST00000482646	TMEM2	Q9UHN6	1383 aa		32.04	■■■□□ 2.72
CREM-233	ENST00000482646	TMEM131L	A2VDJ0	1609 aa		32.04	■■■□□ 2.72
CREM-233	ENST00000482646	SIN3A	Q96ST3	1273 aa		32.03	■■■□□ 2.72
CREM-233	ENST00000482646	LRRC7	Q96NW7	1537 aa		32.03	■■■□□ 2.72
CREM-233	ENST00000482646	STRCP1	A6NGW2	1772 aa		32.02	■■■□□ 2.72
CREM-233	ENST00000482646	IDI1	Q13907	227 aa		32.02	■■■□□ 2.72
CREM-233	ENST00000482646	SOCS7	O14512	581 aa		31.99	■■■□□ 2.71
CREM-233	ENST00000482646	NEUROD1	Q13562	356 aa		31.99	■■■□□ 2.71
CREM-233	ENST00000482646	SPATA31E1	Q6ZUB1	1445 aa		31.98	■■■□□ 2.71
CREM-233	ENST00000482646	CHGA	P10645	457 aa	Known RBP	31.95	■■■□□ 2.71
CREM-233	ENST00000482646	ALK	Q9UM73	1620 aa		31.93	■■■□□ 2.7
CREM-233	ENST00000482646	IFT172	Q9UG01	1749 aa		31.93	■■■□□ 2.7
CREM-233	ENST00000482646	TONSL	Q96HA7	1378 aa		31.92	■■■□□ 2.7
CREM-233	ENST00000482646	PPL	O60437	1756 aa		31.9	■■■□□ 2.7
CREM-233	ENST00000482646	ZNF326	Q5BKZ1	582 aa	Known RBP	31.85	■■■□□ 2.69
CREM-233	ENST00000482646	NEXMIF	Q5QGS0	1516 aa		31.85	■■■□□ 2.69
CREM-233	ENST00000482646	RGL3	Q3MIN7	710 aa		31.84	■■■□□ 2.69
CREM-233	ENST00000482646	MED1	Q15648	1581 aa	Predicted RBP	31.84	■■■□□ 2.69
CREM-233	ENST00000482646	TIMELESS	Q9UNS1	1208 aa		31.83	■■■□□ 2.69
CREM-233	ENST00000482646	KCNA6	P17658	529 aa		31.81	■■■□□ 2.68
CREM-233	ENST00000482646	BCAN	Q96GW7	911 aa		31.81	■■■□□ 2.68
CREM-233	ENST00000482646	SLC26A8	Q96RN1	970 aa		31.81	■■■□□ 2.68
CREM-233	ENST00000482646	RPGRIP1L	Q68CZ1	1315 aa		31.8	■■■□□ 2.68
CREM-233	ENST00000482646	HDGF	P51858	240 aa	Known RBP	31.79	■■■□□ 2.68
CREM-233	ENST00000482646	SENP3	Q9H4L4	574 aa	Predicted RBP	31.79	■■■□□ 2.68
CREM-233	ENST00000482646	MYOM2	P54296	1465 aa		31.78	■■■□□ 2.68
CREM-233	ENST00000482646	RIMS2	Q9UQ26	1411 aa		31.77	■■■□□ 2.68
CREM-233	ENST00000482646	XIRP1	Q702N8	1843 aa	Known RBP	31.77	■■■□□ 2.68
CREM-233	ENST00000482646	ZFYVE9	O95405	1425 aa		31.76	■■■□□ 2.68
CREM-233	ENST00000482646	L3MBTL2	Q969R5	705 aa		31.76	■■■□□ 2.67
CREM-233	ENST00000482646	PPP1R15A	O75807	674 aa	Predicted RBP	31.75	■■■□□ 2.67
CREM-233	ENST00000482646	TMEM94	Q12767	1356 aa		31.75	■■■□□ 2.67
CREM-233	ENST00000482646	PROSER2	Q86WR7	435 aa	Predicted RBP	31.74	■■■□□ 2.67
CREM-233	ENST00000482646	DCAF11	Q8TEB1	546 aa		31.72	■■■□□ 2.67
CREM-233	ENST00000482646	STAC3	Q96MF2	364 aa		31.72	■■■□□ 2.67
CREM-233	ENST00000482646	PHF23	Q9BUL5	403 aa	Predicted RBP	31.72	■■■□□ 2.67
CREM-233	ENST00000482646	PLEKHG1	Q9ULL1	1385 aa		31.7	■■■□□ 2.67
CREM-233	ENST00000482646	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	31.7	■■■□□ 2.67
CREM-233	ENST00000482646	NKTR	P30414	1462 aa	Known RBP	31.7	■■■□□ 2.66
CREM-233	ENST00000482646	ZEB1	P37275	1124 aa	Predicted RBP	31.69	■■■□□ 2.66
CREM-233	ENST00000482646	NWD1	Q149M9	1564 aa		31.68	■■■□□ 2.66
CREM-233	ENST00000482646	NRXN1	Q9ULB1	1477 aa		31.66	■■■□□ 2.66
CREM-233	ENST00000482646	VGF	O15240	615 aa	Predicted RBP	31.66	■■■□□ 2.66
CREM-233	ENST00000482646	KDM2A	Q9Y2K7	1162 aa		31.66	■■■□□ 2.66
CREM-233	ENST00000482646	FAM135B	Q49AJ0	1406 aa		31.66	■■■□□ 2.66
CREM-233	ENST00000482646	LAMC1	P11047	1609 aa		31.63	■■■□□ 2.65
CREM-233	ENST00000482646	NUTM2D	Q5VT03	806 aa	Predicted RBP	31.62	■■■□□ 2.65
CREM-233	ENST00000482646	PRAG1	Q86YV5	1406 aa		31.62	■■■□□ 2.65
CREM-233	ENST00000482646	RBM33	Q96EV2	1170 aa	Known RBP	31.62	■■■□□ 2.65
CREM-233	ENST00000482646	KIAA1210	Q9ULL0	1709 aa		31.61	■■■□□ 2.65
CREM-233	ENST00000482646	MSH6	P52701	1360 aa		31.61	■■■□□ 2.65
CREM-233	ENST00000482646	PIK3C2G	O75747	1445 aa		31.6	■■■□□ 2.65
CREM-233	ENST00000482646	SETBP1	Q9Y6X0	1596 aa		31.6	■■■□□ 2.65
CREM-233	ENST00000482646	ADGRF5	Q8IZF2	1346 aa		31.59	■■■□□ 2.65
CREM-233	ENST00000482646	TBX22	Q9Y458	520 aa		31.59	■■■□□ 2.65
CREM-233	ENST00000482646	TRPM1	Q7Z4N2	1603 aa		31.58	■■■□□ 2.65
CREM-233	ENST00000482646	NRXN3	Q9Y4C0	1643 aa		31.57	■■■□□ 2.64
CREM-233	ENST00000482646	CHD2	O14647	1828 aa	Known RBP	31.56	■■■□□ 2.64
CREM-233	ENST00000482646	ROBO1	Q9Y6N7	1651 aa		31.54	■■■□□ 2.64
CREM-233	ENST00000482646	DIP2A	Q14689	1571 aa		31.53	■■■□□ 2.64
CREM-233	ENST00000482646	SETD1A	O15047	1707 aa	Known RBP	31.52	■■■□□ 2.64
CREM-233	ENST00000482646	RALGAPB	Q86X10	1494 aa		31.5	■■■□□ 2.63
CREM-233	ENST00000482646	PIK3R4	Q99570	1358 aa		31.49	■■■□□ 2.63
CREM-233	ENST00000482646	SLAIN2	Q9P270	581 aa		31.49	■■■□□ 2.63
CREM-233	ENST00000482646	ADAMTS13	Q76LX8	1427 aa		31.49	■■■□□ 2.63
CREM-233	ENST00000482646	NCOA3	Q9Y6Q9	1424 aa		31.49	■■■□□ 2.63
CREM-233	ENST00000482646	NBPF8	Q3BBV2	869 aa		31.48	■■■□□ 2.63
CREM-233	ENST00000482646	C14orf37	Q86TY3	774 aa		31.47	■■■□□ 2.63
CREM-233	ENST00000482646	C14orf93	Q9H972	538 aa	Known RBP	31.42	■■■□□ 2.62
CREM-233	ENST00000482646	CFAP70	Q5T0N1	1121 aa		31.4	■■■□□ 2.62
CREM-233	ENST00000482646	ASXL1	Q8IXJ9	1541 aa		31.39	■■■□□ 2.62
CREM-233	ENST00000482646	ROCK2	O75116	1388 aa	Known RBP	31.39	■■■□□ 2.62
CREM-233	ENST00000482646	ADGRB1	O14514	1584 aa		31.39	■■■□□ 2.61
CREM-233	ENST00000482646	CADPS2	Q86UW7	1296 aa		31.38	■■■□□ 2.61
CREM-233	ENST00000482646	ATF3	P18847	181 aa		31.37	■■■□□ 2.61
CREM-233	ENST00000482646	C19orf44	Q9H6X5	657 aa		31.37	■■■□□ 2.61
CREM-233	ENST00000482646	AMOTL2	Q9Y2J4	779 aa		31.37	■■■□□ 2.61
CREM-233	ENST00000482646	PHLPP1	O60346	1717 aa		31.36	■■■□□ 2.61
CREM-233	ENST00000482646	GPRASP1	Q5JY77	1395 aa		31.35	■■■□□ 2.61
CREM-233	ENST00000482646	RGS17	Q9UGC6	210 aa	Predicted RBP	31.34	■■■□□ 2.61
CREM-233	ENST00000482646	KNDC1	Q76NI1	1749 aa		31.33	■■■□□ 2.61
CREM-233	ENST00000482646	JCAD	Q9P266	1359 aa		31.31	■■■□□ 2.6
CREM-233	ENST00000482646	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	31.31	■■■□□ 2.6
CREM-233	ENST00000482646	PTPRU	Q92729	1446 aa		31.31	■■■□□ 2.6
CREM-233	ENST00000482646	NBPF1	Q3BBV0	1214 aa		31.3	■■■□□ 2.6
CREM-233	ENST00000482646	MET	P08581	1390 aa		31.3	■■■□□ 2.6

Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms