RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 ARHGAP23Q9P227 1491 aa28.89■■■□□ 2.22
TRAPPC12-220ENST00000482645 PPP1R15AO75807 674 aaPredicted RBP28.89■■■□□ 2.21
TRAPPC12-220ENST00000482645 SENP3Q9H4L4 574 aaPredicted RBP28.89■■■□□ 2.21
TRAPPC12-220ENST00000482645 LTKP29376 864 aa28.88■■■□□ 2.21
TRAPPC12-220ENST00000482645 CLSPNQ9HAW4 1339 aa28.87■■■□□ 2.21
TRAPPC12-220ENST00000482645 ZFYVE9O95405 1425 aa28.87■■■□□ 2.21
TRAPPC12-220ENST00000482645 POLR1AO95602 1720 aaPredicted RBP28.87■■■□□ 2.21
TRAPPC12-220ENST00000482645 SCAF11Q99590 1463 aaKnown RBP28.86■■■□□ 2.21
TRAPPC12-220ENST00000482645 NEXMIFQ5QGS0 1516 aa28.86■■■□□ 2.21
TRAPPC12-220ENST00000482645 NEURL4Q96JN8 1562 aa28.85■■■□□ 2.21
TRAPPC12-220ENST00000482645 HDGFP51858 240 aaKnown RBP28.84■■■□□ 2.21
TRAPPC12-220ENST00000482645 STRCQ7RTU9 1775 aa28.84■■■□□ 2.21
TRAPPC12-220ENST00000482645 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.84■■■□□ 2.21
TRAPPC12-220ENST00000482645 RPGRIP1LQ68CZ1 1315 aa28.82■■■□□ 2.2
TRAPPC12-220ENST00000482645 PPLO60437 1756 aa28.81■■■□□ 2.2
TRAPPC12-220ENST00000482645 BCANQ96GW7 911 aa28.81■■■□□ 2.2
TRAPPC12-220ENST00000482645 DCAF11Q8TEB1 546 aa28.79■■■□□ 2.2
TRAPPC12-220ENST00000482645 KDM2AQ9Y2K7 1162 aa28.79■■■□□ 2.2
TRAPPC12-220ENST00000482645 IFT172Q9UG01 1749 aa28.78■■■□□ 2.2
TRAPPC12-220ENST00000482645 NPHP4O75161 1426 aaPredicted RBP28.76■■■□□ 2.2
TRAPPC12-220ENST00000482645 TONSLQ96HA7 1378 aa28.76■■■□□ 2.19
TRAPPC12-220ENST00000482645 VGFO15240 615 aaPredicted RBP28.76■■■□□ 2.19
TRAPPC12-220ENST00000482645 IQGAP1P46940 1657 aa28.74■■■□□ 2.19
TRAPPC12-220ENST00000482645 L3MBTL2Q969R5 705 aa28.74■■■□□ 2.19
TRAPPC12-220ENST00000482645 PLEKHG1Q9ULL1 1385 aa28.72■■■□□ 2.19
TRAPPC12-220ENST00000482645 ADGRF5Q8IZF2 1346 aa28.72■■■□□ 2.19
TRAPPC12-220ENST00000482645 MED14O60244 1454 aa28.72■■■□□ 2.19
TRAPPC12-220ENST00000482645 DMRT2Q9Y5R5 561 aa28.69■■■□□ 2.18
TRAPPC12-220ENST00000482645 SLC26A8Q96RN1 970 aa28.69■■■□□ 2.18
TRAPPC12-220ENST00000482645 MYOM2P54296 1465 aa28.68■■■□□ 2.18
TRAPPC12-220ENST00000482645 NRXN3Q9Y4C0 1643 aa28.63■■■□□ 2.17
TRAPPC12-220ENST00000482645 SETBP1Q9Y6X0 1596 aa28.63■■■□□ 2.17
TRAPPC12-220ENST00000482645 PIK3C2GO75747 1445 aa28.62■■■□□ 2.17
TRAPPC12-220ENST00000482645 ADAMTS13Q76LX8 1427 aa28.61■■■□□ 2.17
TRAPPC12-220ENST00000482645 NRXN1Q9ULB1 1477 aa28.6■■■□□ 2.17
TRAPPC12-220ENST00000482645 STAC3Q96MF2 364 aa28.6■■■□□ 2.17
TRAPPC12-220ENST00000482645 ZEB1P37275 1124 aaPredicted RBP28.59■■■□□ 2.17
TRAPPC12-220ENST00000482645 ALKQ9UM73 1620 aa28.57■■■□□ 2.16
TRAPPC12-220ENST00000482645 DIP2AQ14689 1571 aa28.56■■■□□ 2.16
TRAPPC12-220ENST00000482645 PRAG1Q86YV5 1406 aa28.56■■■□□ 2.16
TRAPPC12-220ENST00000482645 CFAP70Q5T0N1 1121 aa28.55■■■□□ 2.16
TRAPPC12-220ENST00000482645 TBX22Q9Y458 520 aa28.55■■■□□ 2.16
TRAPPC12-220ENST00000482645 TIMELESSQ9UNS1 1208 aa28.53■■■□□ 2.16
TRAPPC12-220ENST00000482645 METP08581 1390 aa28.51■■■□□ 2.16
TRAPPC12-220ENST00000482645 SETD1AO15047 1707 aaKnown RBP28.51■■■□□ 2.15
TRAPPC12-220ENST00000482645 ZNF335Q9H4Z2 1342 aaPredicted RBP28.51■■■□□ 2.15
TRAPPC12-220ENST00000482645 LAMC1P11047 1609 aa28.5■■■□□ 2.15
TRAPPC12-220ENST00000482645 C14orf93Q9H972 538 aaKnown RBP28.5■■■□□ 2.15
TRAPPC12-220ENST00000482645 NBPF8Q3BBV2 869 aa28.48■■■□□ 2.15
TRAPPC12-220ENST00000482645 TMEM132EQ6IEE7 984 aa28.48■■■□□ 2.15
TRAPPC12-220ENST00000482645 ASXL1Q8IXJ9 1541 aa28.44■■■□□ 2.14
TRAPPC12-220ENST00000482645 PTPRUQ92729 1446 aa28.43■■■□□ 2.14
TRAPPC12-220ENST00000482645 PIK3R4Q99570 1358 aa28.43■■■□□ 2.14
TRAPPC12-220ENST00000482645 CHD2O14647 1828 aaKnown RBP28.43■■■□□ 2.14
TRAPPC12-220ENST00000482645 STK26Q9P289 416 aa28.43■■■□□ 2.14
TRAPPC12-220ENST00000482645 KIAA1210Q9ULL0 1709 aa28.42■■■□□ 2.14
TRAPPC12-220ENST00000482645 STRCP1A6NGW2 1772 aa28.42■■■□□ 2.14
TRAPPC12-220ENST00000482645 KCNA6P17658 529 aa28.42■■■□□ 2.14
TRAPPC12-220ENST00000482645 NBPF1Q3BBV0 1214 aa28.42■■■□□ 2.14
TRAPPC12-220ENST00000482645 AMOTL2Q9Y2J4 779 aa28.42■■■□□ 2.14
TRAPPC12-220ENST00000482645 TRPM1Q7Z4N2 1603 aa28.42■■■□□ 2.14
TRAPPC12-220ENST00000482645 ROCK2O75116 1388 aaKnown RBP28.39■■■□□ 2.14
TRAPPC12-220ENST00000482645 ADGRB1O14514 1584 aa28.39■■■□□ 2.13
TRAPPC12-220ENST00000482645 NWD1Q149M9 1564 aa28.38■■■□□ 2.13
TRAPPC12-220ENST00000482645 YTHDC2Q9H6S0 1430 aaKnown RBP28.37■■■□□ 2.13
TRAPPC12-220ENST00000482645 XRN1Q8IZH2 1706 aaKnown RBP28.36■■■□□ 2.13
TRAPPC12-220ENST00000482645 RALGAPBQ86X10 1494 aa28.34■■■□□ 2.13
TRAPPC12-220ENST00000482645 LRPPRCP42704 1394 aaKnown RBP28.34■■■□□ 2.13
TRAPPC12-220ENST00000482645 RBM33Q96EV2 1170 aaKnown RBP28.33■■■□□ 2.13
TRAPPC12-220ENST00000482645 TRAK1Q9UPV9 953 aa28.33■■■□□ 2.13
TRAPPC12-220ENST00000482645 LTBP4Q8N2S1 1624 aa28.33■■■□□ 2.13
TRAPPC12-220ENST00000482645 NKTRP30414 1462 aaKnown RBP28.32■■■□□ 2.12
TRAPPC12-220ENST00000482645 PROSER2Q86WR7 435 aaPredicted RBP28.32■■■□□ 2.12
TRAPPC12-220ENST00000482645 CPS1P31327 1500 aa28.32■■■□□ 2.12
TRAPPC12-220ENST00000482645 CARD11Q9BXL7 1154 aa28.29■■■□□ 2.12
TRAPPC12-220ENST00000482645 ABCC11Q96J66 1382 aa28.29■■■□□ 2.12
TRAPPC12-220ENST00000482645 ROBO2Q9HCK4 1378 aa28.29■■■□□ 2.12
TRAPPC12-220ENST00000482645 KNDC1Q76NI1 1749 aa28.28■■■□□ 2.12
TRAPPC12-220ENST00000482645 PTCH1Q13635 1447 aa28.27■■■□□ 2.12
TRAPPC12-220ENST00000482645 LRRC7Q96NW7 1537 aa28.27■■■□□ 2.12
TRAPPC12-220ENST00000482645 TECPR2O15040 1411 aa28.26■■■□□ 2.11
TRAPPC12-220ENST00000482645 WAPLQ7Z5K2 1190 aa28.25■■■□□ 2.11
TRAPPC12-220ENST00000482645 TMEM94Q12767 1356 aa28.25■■■□□ 2.11
TRAPPC12-220ENST00000482645 GPRASP1Q5JY77 1395 aa28.24■■■□□ 2.11
TRAPPC12-220ENST00000482645 SAFB2Q14151 953 aaKnown RBP eCLIP28.24■■■□□ 2.11
TRAPPC12-220ENST00000482645 C14orf37Q86TY3 774 aa28.24■■■□□ 2.11
TRAPPC12-220ENST00000482645 PRAM1Q96QH2 718 aa28.23■■■□□ 2.11
TRAPPC12-220ENST00000482645 POGKQ9P215 609 aa28.23■■■□□ 2.11
TRAPPC12-220ENST00000482645 ARHGEF28Q8N1W1 1705 aaKnown RBP28.22■■■□□ 2.11
TRAPPC12-220ENST00000482645 PLEKHH1Q9ULM0 1364 aa28.22■■■□□ 2.11
TRAPPC12-220ENST00000482645 DLC1Q96QB1 1528 aa28.21■■■□□ 2.11
TRAPPC12-220ENST00000482645 XIRP1Q702N8 1843 aaKnown RBP28.19■■■□□ 2.1
TRAPPC12-220ENST00000482645 FAM135BQ49AJ0 1406 aa28.19■■■□□ 2.1
TRAPPC12-220ENST00000482645 CERKQ8TCT0 537 aa28.16■■■□□ 2.1
TRAPPC12-220ENST00000482645 EIF3AQ14152 1382 aaKnown RBP28.16■■■□□ 2.1
TRAPPC12-220ENST00000482645 SIRT1Q96EB6 747 aa28.15■■■□□ 2.1
TRAPPC12-220ENST00000482645 NALCNQ8IZF0 1738 aa28.13■■■□□ 2.09
TRAPPC12-220ENST00000482645 CENPJQ9HC77 1338 aaPredicted RBP28.13■■■□□ 2.09
TRAPPC12-220ENST00000482645 MSH6P52701 1360 aa28.12■■■□□ 2.09
TRAPPC12-220ENST00000482645 USP47Q96K76 1375 aa28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms