RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 HFM1A2PYH4 1435 aa29.88■■■□□ 2.37
MSH5-215ENST00000482280 LRRC7Q96NW7 1537 aa29.87■■■□□ 2.37
MSH5-215ENST00000482280 TMEM131LA2VDJ0 1609 aa29.86■■■□□ 2.37
MSH5-215ENST00000482280 SENP3Q9H4L4 574 aaPredicted RBP29.85■■■□□ 2.37
MSH5-215ENST00000482280 ZFYVE9O95405 1425 aa29.83■■■□□ 2.37
MSH5-215ENST00000482280 PLEKHG1Q9ULL1 1385 aa29.83■■■□□ 2.37
MSH5-215ENST00000482280 KCNA6P17658 529 aa29.83■■■□□ 2.37
MSH5-215ENST00000482280 STRCP1A6NGW2 1772 aa29.82■■■□□ 2.36
MSH5-215ENST00000482280 ZNF326Q5BKZ1 582 aaKnown RBP29.8■■■□□ 2.36
MSH5-215ENST00000482280 MYO5BQ9ULV0 1848 aa29.79■■■□□ 2.36
MSH5-215ENST00000482280 PROSER2Q86WR7 435 aaPredicted RBP29.78■■■□□ 2.36
MSH5-215ENST00000482280 SPHKAPQ2M3C7 1700 aa29.78■■■□□ 2.36
MSH5-215ENST00000482280 NUTM2DQ5VT03 806 aaPredicted RBP29.77■■■□□ 2.36
MSH5-215ENST00000482280 SLC4A1APQ9BWU0 796 aaKnown RBP29.77■■■□□ 2.36
MSH5-215ENST00000482280 DISP3Q9P2K9 1392 aa29.75■■■□□ 2.35
MSH5-215ENST00000482280 TBX22Q9Y458 520 aa29.73■■■□□ 2.35
MSH5-215ENST00000482280 TMEM94Q12767 1356 aa29.72■■■□□ 2.35
MSH5-215ENST00000482280 HSPA1LP34931 641 aa29.71■■■□□ 2.35
MSH5-215ENST00000482280 NKTRP30414 1462 aaKnown RBP29.71■■■□□ 2.35
MSH5-215ENST00000482280 TRPM2O94759 1503 aa29.69■■■□□ 2.34
MSH5-215ENST00000482280 ACIN1Q9UKV3 1341 aaKnown RBP29.67■■■□□ 2.34
MSH5-215ENST00000482280 DIP2AQ14689 1571 aa29.65■■■□□ 2.34
MSH5-215ENST00000482280 NWD1Q149M9 1564 aa29.65■■■□□ 2.34
MSH5-215ENST00000482280 C14orf37Q86TY3 774 aa29.64■■■□□ 2.34
MSH5-215ENST00000482280 MSH6P52701 1360 aa29.64■■■□□ 2.33
MSH5-215ENST00000482280 RBM33Q96EV2 1170 aaKnown RBP29.63■■■□□ 2.33
MSH5-215ENST00000482280 PIK3R4Q99570 1358 aa29.63■■■□□ 2.33
MSH5-215ENST00000482280 CLTCL1P53675 1640 aa29.62■■■□□ 2.33
MSH5-215ENST00000482280 ADAMTS13Q76LX8 1427 aa29.6■■■□□ 2.33
MSH5-215ENST00000482280 ALKQ9UM73 1620 aa29.6■■■□□ 2.33
MSH5-215ENST00000482280 KIF1BO60333 1816 aa29.57■■■□□ 2.32
MSH5-215ENST00000482280 XIRP1Q702N8 1843 aaKnown RBP29.57■■■□□ 2.32
MSH5-215ENST00000482280 CHD2O14647 1828 aaKnown RBP29.56■■■□□ 2.32
MSH5-215ENST00000482280 VGFO15240 615 aaPredicted RBP29.55■■■□□ 2.32
MSH5-215ENST00000482280 MPHOSPH9Q99550 1183 aa29.54■■■□□ 2.32
MSH5-215ENST00000482280 AMOTL2Q9Y2J4 779 aa29.54■■■□□ 2.32
MSH5-215ENST00000482280 SETD5Q9C0A6 1442 aa29.54■■■□□ 2.32
MSH5-215ENST00000482280 FOXD1Q16676 465 aa29.52■■■□□ 2.32
MSH5-215ENST00000482280 NCOA3Q9Y6Q9 1424 aa29.52■■■□□ 2.32
MSH5-215ENST00000482280 SETBP1Q9Y6X0 1596 aa29.52■■■□□ 2.32
MSH5-215ENST00000482280 RPGRIP1LQ68CZ1 1315 aa29.51■■■□□ 2.32
MSH5-215ENST00000482280 CCDC144AA2RUR9 1427 aa29.51■■■□□ 2.31
MSH5-215ENST00000482280 FAM135BQ49AJ0 1406 aa29.5■■■□□ 2.31
MSH5-215ENST00000482280 NEXMIFQ5QGS0 1516 aa29.5■■■□□ 2.31
MSH5-215ENST00000482280 ATF3P18847 181 aa29.47■■■□□ 2.31
MSH5-215ENST00000482280 SLAIN2Q9P270 581 aa29.47■■■□□ 2.31
MSH5-215ENST00000482280 CADPS2Q86UW7 1296 aa29.45■■■□□ 2.31
MSH5-215ENST00000482280 C19orf44Q9H6X5 657 aa29.45■■■□□ 2.31
MSH5-215ENST00000482280 PHF23Q9BUL5 403 aaPredicted RBP29.42■■■□□ 2.3
MSH5-215ENST00000482280 NRXN3Q9Y4C0 1643 aa29.42■■■□□ 2.3
MSH5-215ENST00000482280 METP08581 1390 aa29.41■■■□□ 2.3
MSH5-215ENST00000482280 PTPRUQ92729 1446 aa29.41■■■□□ 2.3
MSH5-215ENST00000482280 RGL3Q3MIN7 710 aa29.4■■■□□ 2.3
MSH5-215ENST00000482280 RAB3GAP2Q9H2M9 1393 aa29.39■■■□□ 2.3
MSH5-215ENST00000482280 ROBO1Q9Y6N7 1651 aa29.39■■■□□ 2.3
MSH5-215ENST00000482280 MED1Q15648 1581 aaPredicted RBP29.39■■■□□ 2.29
MSH5-215ENST00000482280 ILDR2Q71H61 639 aa29.34■■■□□ 2.29
MSH5-215ENST00000482280 XRN1Q8IZH2 1706 aaKnown RBP29.34■■■□□ 2.29
MSH5-215ENST00000482280 ANKRD30BQ9BXX2 1392 aa29.32■■■□□ 2.28
MSH5-215ENST00000482280 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.31■■■□□ 2.28
MSH5-215ENST00000482280 DCCP43146 1447 aa29.3■■■□□ 2.28
MSH5-215ENST00000482280 PPLO60437 1756 aa29.3■■■□□ 2.28
MSH5-215ENST00000482280 SPATA31E1Q6ZUB1 1445 aa29.27■■■□□ 2.28
MSH5-215ENST00000482280 PHLPP1O60346 1717 aa29.24■■■□□ 2.27
MSH5-215ENST00000482280 ADGRL3Q9HAR2 1447 aa29.24■■■□□ 2.27
MSH5-215ENST00000482280 ADGRF5Q8IZF2 1346 aa29.23■■■□□ 2.27
MSH5-215ENST00000482280 PTCH1Q13635 1447 aa29.23■■■□□ 2.27
MSH5-215ENST00000482280 HRCP23327 699 aa29.22■■■□□ 2.27
MSH5-215ENST00000482280 JCADQ9P266 1359 aa29.2■■■□□ 2.26
MSH5-215ENST00000482280 SOCS7O14512 581 aa29.19■■■□□ 2.26
MSH5-215ENST00000482280 BRINP3Q76B58 766 aa29.18■■■□□ 2.26
MSH5-215ENST00000482280 ROBO2Q9HCK4 1378 aa29.17■■■□□ 2.26
MSH5-215ENST00000482280 SETD1AO15047 1707 aaKnown RBP29.17■■■□□ 2.26
MSH5-215ENST00000482280 STK26Q9P289 416 aa29.16■■■□□ 2.26
MSH5-215ENST00000482280 MST1RQ04912 1400 aa29.15■■■□□ 2.26
MSH5-215ENST00000482280 PRAG1Q86YV5 1406 aa29.13■■■□□ 2.25
MSH5-215ENST00000482280 IFT172Q9UG01 1749 aa29.13■■■□□ 2.25
MSH5-215ENST00000482280 PIK3C2GO75747 1445 aa29.12■■■□□ 2.25
MSH5-215ENST00000482280 AHDC1Q5TGY3 1603 aaPredicted RBP29.12■■■□□ 2.25
MSH5-215ENST00000482280 NALCNQ8IZF0 1738 aa29.11■■■□□ 2.25
MSH5-215ENST00000482280 ASXL1Q8IXJ9 1541 aa29.1■■■□□ 2.25
MSH5-215ENST00000482280 COL16A1Q07092 1604 aaPredicted RBP29.09■■■□□ 2.25
MSH5-215ENST00000482280 TMEM132EQ6IEE7 984 aa29.09■■■□□ 2.25
MSH5-215ENST00000482280 LRPPRCP42704 1394 aaKnown RBP29.09■■■□□ 2.25
MSH5-215ENST00000482280 SPATA31A6Q5VVP1 1343 aa29.08■■■□□ 2.25
MSH5-215ENST00000482280 MYOM2P54296 1465 aa29.07■■■□□ 2.24
MSH5-215ENST00000482280 MEX3CQ5U5Q3 659 aaKnown RBP29.07■■■□□ 2.24
MSH5-215ENST00000482280 C14orf93Q9H972 538 aaKnown RBP29.05■■■□□ 2.24
MSH5-215ENST00000482280 C1orf167Q5SNV9 1468 aa29.04■■■□□ 2.24
MSH5-215ENST00000482280 DHX57Q6P158 1386 aaKnown RBP29.04■■■□□ 2.24
MSH5-215ENST00000482280 ABCC11Q96J66 1382 aa29.04■■■□□ 2.24
MSH5-215ENST00000482280 LRRC59Q96AG4 307 aaKnown RBP29.04■■■□□ 2.24
MSH5-215ENST00000482280 TECPR2O15040 1411 aa29.03■■■□□ 2.24
MSH5-215ENST00000482280 YTHDC2Q9H6S0 1430 aaKnown RBP29.03■■■□□ 2.24
MSH5-215ENST00000482280 LAMC1P11047 1609 aa29.02■■■□□ 2.24
MSH5-215ENST00000482280 CFAP70Q5T0N1 1121 aa29.01■■■□□ 2.23
MSH5-215ENST00000482280 WAPLQ7Z5K2 1190 aa29.01■■■□□ 2.23
MSH5-215ENST00000482280 DCAF11Q8TEB1 546 aa29.01■■■□□ 2.23
MSH5-215ENST00000482280 STAC3Q96MF2 364 aa29.01■■■□□ 2.23
MSH5-215ENST00000482280 KDM2AQ9Y2K7 1162 aa29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms