RNA–Protein interactions for RNA: ENST00000482232.1

GTF2I-208, Transcript of general transcription factor IIi, humanhuman

TSL 2

Gene GTF2I, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-208ENST00000482232 AMHR2Q16671 573 aa13.16□□□□□ -0.3
GTF2I-208ENST00000482232 TMUB1Q9BVT8 246 aa13.16□□□□□ -0.3
GTF2I-208ENST00000482232 TRIM66O15016 1216 aa13.14□□□□□ -0.31
GTF2I-208ENST00000482232 HDGFP51858 240 aaKnown RBP13.14□□□□□ -0.31
GTF2I-208ENST00000482232 NLRP7Q8WX94 980 aa13.14□□□□□ -0.31
GTF2I-208ENST00000482232 DAXXQ9UER7 740 aaPredicted RBP13.14□□□□□ -0.31
GTF2I-208ENST00000482232 SLF2Q8IX21 1173 aa13.12□□□□□ -0.31
GTF2I-208ENST00000482232 TSR3Q9UJK0 312 aaKnown RBP13.12□□□□□ -0.31
GTF2I-208ENST00000482232 HCSTQ9UBK5 93 aa13.11□□□□□ -0.31
GTF2I-208ENST00000482232 PLSCR2Q9NRY7 297 aa13.1□□□□□ -0.31
GTF2I-208ENST00000482232 HPS5Q9UPZ3 1129 aa13.1□□□□□ -0.31
GTF2I-208ENST00000482232 CLCN1P35523 988 aa13.08□□□□□ -0.32
GTF2I-208ENST00000482232 MDM2Q00987 491 aaPredicted RBP13.08□□□□□ -0.32
GTF2I-208ENST00000482232 REPIN1Q9BWE0 567 aaKnown RBP13.08□□□□□ -0.32
GTF2I-208ENST00000482232 GPCPD1Q9NPB8 672 aa13.08□□□□□ -0.32
GTF2I-208ENST00000482232 WBP1LQ9NX94 342 aa13.08□□□□□ -0.32
GTF2I-208ENST00000482232 SLC10A3P09131 477 aa13.06□□□□□ -0.32
GTF2I-208ENST00000482232 PTPN5P54829 565 aa13.06□□□□□ -0.32
GTF2I-208ENST00000482232 NYAP1Q6ZVC0 841 aa13.06□□□□□ -0.32
GTF2I-208ENST00000482232 NECTIN2Q92692 538 aa13.06□□□□□ -0.32
GTF2I-208ENST00000482232 PPP4CP60510 307 aa13.05□□□□□ -0.32
GTF2I-208ENST00000482232 PRKCSHP14314 528 aaPredicted RBP13.04□□□□□ -0.32
GTF2I-208ENST00000482232 SLC4A3P48751 1232 aa13.04□□□□□ -0.32
GTF2I-208ENST00000482232 PDE4DQ08499 809 aa13.04□□□□□ -0.32
GTF2I-208ENST00000482232 PARP9Q8IXQ6 854 aa13.03□□□□□ -0.32
GTF2I-208ENST00000482232 FAM217BQ9NTX9 383 aaPredicted RBP13.03□□□□□ -0.32
GTF2I-208ENST00000482232 SULF1Q8IWU6 871 aa13.02□□□□□ -0.33
GTF2I-208ENST00000482232 RNF40O75150 1001 aa13.01□□□□□ -0.33
GTF2I-208ENST00000482232 DDX11L8A8MPP1 907 aa13□□□□□ -0.33
GTF2I-208ENST00000482232 CD46P15529 392 aa13□□□□□ -0.33
GTF2I-208ENST00000482232 APLP1P51693 650 aa12.99□□□□□ -0.33
GTF2I-208ENST00000482232 TTLL12Q14166 644 aaPredicted RBP12.99□□□□□ -0.33
GTF2I-208ENST00000482232 GIGYF2Q6Y7W6 1299 aaKnown RBP12.99□□□□□ -0.33
GTF2I-208ENST00000482232 RSPH4AQ5TD94 716 aa12.98□□□□□ -0.33
GTF2I-208ENST00000482232 GCGRP47871 477 aa12.96□□□□□ -0.33
GTF2I-208ENST00000482232 ACTN4O43707 911 aaKnown RBP12.95□□□□□ -0.34
GTF2I-208ENST00000482232 CFHP08603 1231 aa12.95□□□□□ -0.34
GTF2I-208ENST00000482232 SSTR3P32745 418 aaPredicted RBP12.95□□□□□ -0.34
GTF2I-208ENST00000482232 PRR14Q9BWN1 585 aa12.95□□□□□ -0.34
GTF2I-208ENST00000482232 RDH13Q8NBN7 331 aa12.94□□□□□ -0.34
GTF2I-208ENST00000482232 MS4A1P11836 297 aa12.92□□□□□ -0.34
GTF2I-208ENST00000482232 KMT5BQ4FZB7 885 aa12.92□□□□□ -0.34
GTF2I-208ENST00000482232 ITGBL1O95965 494 aaPredicted RBP12.89□□□□□ -0.35
GTF2I-208ENST00000482232 TJAP1Q5JTD0 557 aa12.87□□□□□ -0.35
GTF2I-208ENST00000482232 KDM4CQ9H3R0 1056 aa12.87□□□□□ -0.35
GTF2I-208ENST00000482232 GPBP1L1Q9HC44 474 aaPredicted RBP12.87□□□□□ -0.35
GTF2I-208ENST00000482232 BRPF1P55201 1214 aaPredicted RBP12.85□□□□□ -0.35
GTF2I-208ENST00000482232 IFFO2Q5TF58 517 aa12.85□□□□□ -0.35
GTF2I-208ENST00000482232 PCDHB3Q9Y5E6 796 aa12.85□□□□□ -0.35
GTF2I-208ENST00000482232 KDM4AO75164 1064 aa12.84□□□□□ -0.35
GTF2I-208ENST00000482232 FUT2Q10981 343 aa12.84□□□□□ -0.35
GTF2I-208ENST00000482232 MTRQ99707 1265 aa12.84□□□□□ -0.35
GTF2I-208ENST00000482232 BEGAINQ9BUH8 593 aa12.84□□□□□ -0.35
GTF2I-208ENST00000482232 USP46P62068 366 aa12.83□□□□□ -0.36
GTF2I-208ENST00000482232 ATP6V1AP38606 617 aa12.82□□□□□ -0.36
GTF2I-208ENST00000482232 IL21Q9HBE4 155 aa12.82□□□□□ -0.36
GTF2I-208ENST00000482232 MORN1Q5T089 497 aa12.81□□□□□ -0.36
GTF2I-208ENST00000482232 BLOC1S3Q6QNY0 202 aa12.81□□□□□ -0.36
GTF2I-208ENST00000482232 SPIRE2Q8WWL2 714 aa12.81□□□□□ -0.36
GTF2I-208ENST00000482232 HOXA2O43364 376 aa12.79□□□□□ -0.36
GTF2I-208ENST00000482232 NEUROD2Q15784 382 aa12.79□□□□□ -0.36
GTF2I-208ENST00000482232 PUS10Q3MIT2 529 aaKnown RBP12.78□□□□□ -0.36
GTF2I-208ENST00000482232 COPS2P61201 443 aa12.77□□□□□ -0.37
GTF2I-208ENST00000482232 KCNC4Q03721 635 aa12.77□□□□□ -0.37
GTF2I-208ENST00000482232 GRIPAP1Q4V328 841 aa12.77□□□□□ -0.37
GTF2I-208ENST00000482232 NUTM1Q86Y26 1132 aa12.77□□□□□ -0.37
GTF2I-208ENST00000482232 ZNF516Q92618 1163 aa12.77□□□□□ -0.37
GTF2I-208ENST00000482232 FAM117AQ9C073 453 aa12.77□□□□□ -0.37
GTF2I-208ENST00000482232 PLA2G2EQ9NZK7 142 aa12.77□□□□□ -0.37
GTF2I-208ENST00000482232 ZPR1O75312 459 aa12.76□□□□□ -0.37
GTF2I-208ENST00000482232 DIXDC1Q155Q3 683 aa12.76□□□□□ -0.37
GTF2I-208ENST00000482232 SCUBE3Q8IX30 993 aa12.76□□□□□ -0.37
GTF2I-208ENST00000482232 TBC1D2Q9BYX2 928 aa12.76□□□□□ -0.37
GTF2I-208ENST00000482232 NR1I2O75469 434 aa12.75□□□□□ -0.37
GTF2I-208ENST00000482232 DDRGK1Q96HY6 314 aa12.75□□□□□ -0.37
GTF2I-208ENST00000482232 SLC27A5Q9Y2P5 690 aa12.75□□□□□ -0.37
GTF2I-208ENST00000482232 PLEKHG3A1L390 1219 aa12.74□□□□□ -0.37
GTF2I-208ENST00000482232 SALL2Q9Y467 1007 aaPredicted RBP12.74□□□□□ -0.37
GTF2I-208ENST00000482232 GJA5P36382 358 aa12.73□□□□□ -0.37
GTF2I-208ENST00000482232 HLA-CQ95604 372 aa12.73□□□□□ -0.37
GTF2I-208ENST00000482232 THAP11Q96EK4 314 aa12.73□□□□□ -0.37
GTF2I-208ENST00000482232 MOXD2PA6NHM9 499 aa12.71□□□□□ -0.37
GTF2I-208ENST00000482232 MYSM1Q5VVJ2 828 aa12.7□□□□□ -0.38
GTF2I-208ENST00000482232 SPTLC1O15269 473 aa12.69□□□□□ -0.38
GTF2I-208ENST00000482232 BRICD5Q6PL45 260 aa12.69□□□□□ -0.38
GTF2I-208ENST00000482232 PCDHGC3Q9UN70 934 aa12.69□□□□□ -0.38
GTF2I-208ENST00000482232 NDUFV2P19404 249 aa12.68□□□□□ -0.38
GTF2I-208ENST00000482232 GUCA2AQ02747 115 aa12.68□□□□□ -0.38
GTF2I-208ENST00000482232 RSBN1LQ6PCB5 846 aaPredicted RBP12.68□□□□□ -0.38
GTF2I-208ENST00000482232 NKX2-3Q8TAU0 364 aa12.68□□□□□ -0.38
GTF2I-208ENST00000482232 TLL1O43897 1013 aa12.67□□□□□ -0.38
GTF2I-208ENST00000482232 FDX1P10109 184 aa12.67□□□□□ -0.38
GTF2I-208ENST00000482232 RSPH6AQ9H0K4 717 aa12.67□□□□□ -0.38
GTF2I-208ENST00000482232 TUSC1Q2TAM9 212 aa12.66□□□□□ -0.38
GTF2I-208ENST00000482232 Q3C1V9 767 aa12.66□□□□□ -0.38
GTF2I-208ENST00000482232 RNF19BQ6ZMZ0 732 aa12.66□□□□□ -0.38
GTF2I-208ENST00000482232 ADH1BP00325 375 aa12.65□□□□□ -0.38
GTF2I-208ENST00000482232 SH3D19Q5HYK7 790 aa12.65□□□□□ -0.38
GTF2I-208ENST00000482232 FMNL1O95466 1100 aaPredicted RBP12.64□□□□□ -0.39
GTF2I-208ENST00000482232 RIC3Q7Z5B4 369 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms