RNA–Protein interactions for RNA: ENST00000482232.1

GTF2I-208, Transcript of general transcription factor IIi, humanhuman

TSL 2

Gene GTF2I, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-208ENST00000482232 AEBP2Q6ZN18 517 aaPredicted RBP31.59■■■□□ 2.65
GTF2I-208ENST00000482232 CHIC1Q5VXU3 224 aa30.81■■■□□ 2.52
GTF2I-208ENST00000482232 PHF23Q9BUL5 403 aaPredicted RBP27.12■■□□□ 1.93
GTF2I-208ENST00000482232 SENP3Q9H4L4 574 aaPredicted RBP26.77■■□□□ 1.88
GTF2I-208ENST00000482232 PLPPR3Q6T4P5 718 aa24.97■■□□□ 1.59
GTF2I-208ENST00000482232 FOXD1Q16676 465 aa24.87■■□□□ 1.57
GTF2I-208ENST00000482232 PPP6R1Q9UPN7 881 aa23.92■■□□□ 1.42
GTF2I-208ENST00000482232 ADRA2BP18089 450 aa23.84■■□□□ 1.41
GTF2I-208ENST00000482232 PIAS4Q8N2W9 510 aaPredicted RBP23.38■■□□□ 1.33
GTF2I-208ENST00000482232 MSH5O43196 834 aa22.93■■□□□ 1.26
GTF2I-208ENST00000482232 PPP4R3CPQ6ZMV5 832 aa21.99■■□□□ 1.11
GTF2I-208ENST00000482232 SCAF1Q9H7N4 1312 aaKnown RBP21.8■■□□□ 1.08
GTF2I-208ENST00000482232 MAPK8IP2Q13387 824 aaPredicted RBP21.64■■□□□ 1.05
GTF2I-208ENST00000482232 KCNA4P22459 653 aa21.44■■□□□ 1.02
GTF2I-208ENST00000482232 CNKSR2Q8WXI2 1034 aa21.4■■□□□ 1.02
GTF2I-208ENST00000482232 DMRT2Q9Y5R5 561 aa21.4■■□□□ 1.02
GTF2I-208ENST00000482232 NCBP3Q53F19 620 aaKnown RBP21.37■■□□□ 1.01
GTF2I-208ENST00000482232 NPM3O75607 178 aaKnown RBP21.12■□□□□ 0.97
GTF2I-208ENST00000482232 RNF216Q9NWF9 866 aaPredicted RBP21.01■□□□□ 0.95
GTF2I-208ENST00000482232 HOXD11P31277 338 aaPredicted RBP20.97■□□□□ 0.95
GTF2I-208ENST00000482232 POTEDQ86YR6 584 aa20.95■□□□□ 0.94
GTF2I-208ENST00000482232 DNAJC5BQ9UF47 199 aa20.68■□□□□ 0.9
GTF2I-208ENST00000482232 SLC4A1APQ9BWU0 796 aaKnown RBP20.37■□□□□ 0.85
GTF2I-208ENST00000482232 DCAF8L1A6NGE4 600 aa20.28■□□□□ 0.84
GTF2I-208ENST00000482232 SLC4A2P04920 1241 aa19.98■□□□□ 0.79
GTF2I-208ENST00000482232 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.85■□□□□ 0.77
GTF2I-208ENST00000482232 ZBTB22O15209 634 aa19.77■□□□□ 0.76
GTF2I-208ENST00000482232 FOXD4L1Q9NU39 408 aa19.75■□□□□ 0.75
GTF2I-208ENST00000482232 EHMT2Q96KQ7 1210 aa19.68■□□□□ 0.74
GTF2I-208ENST00000482232 RNF39Q9H2S5 420 aa19.68■□□□□ 0.74
GTF2I-208ENST00000482232 CSRNP3Q8WYN3 585 aa19.61■□□□□ 0.73
GTF2I-208ENST00000482232 U3KPZ7 1027 aaPredicted RBP19.61■□□□□ 0.73
GTF2I-208ENST00000482232 MYCNP04198 464 aaPredicted RBP19.5■□□□□ 0.71
GTF2I-208ENST00000482232 C1QBPQ07021 282 aaKnown RBP19.43■□□□□ 0.7
GTF2I-208ENST00000482232 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.32■□□□□ 0.68
GTF2I-208ENST00000482232 HNRNPUL2Q1KMD3 747 aaKnown RBP19.32■□□□□ 0.68
GTF2I-208ENST00000482232 SAMD1Q6SPF0 538 aaPredicted RBP19.25■□□□□ 0.67
GTF2I-208ENST00000482232 ATXN8OSP0DMR3 200 aa19.12■□□□□ 0.65
GTF2I-208ENST00000482232 APLP2Q06481 763 aa19.1■□□□□ 0.65
GTF2I-208ENST00000482232 CACNB1Q02641 598 aaPredicted RBP19.08■□□□□ 0.64
GTF2I-208ENST00000482232 SPINK5Q9NQ38 1064 aaPredicted RBP19.04■□□□□ 0.64
GTF2I-208ENST00000482232 ATF5Q9Y2D1 282 aaPredicted RBP18.99■□□□□ 0.63
GTF2I-208ENST00000482232 CAPN15O75808 1086 aa18.9■□□□□ 0.62
GTF2I-208ENST00000482232 ZNF219Q9P2Y4 722 aaPredicted RBP18.87■□□□□ 0.61
GTF2I-208ENST00000482232 TRHP20396 242 aaPredicted RBP18.8■□□□□ 0.6
GTF2I-208ENST00000482232 DSG3P32926 999 aa18.7■□□□□ 0.58
GTF2I-208ENST00000482232 ABCB7O75027 752 aa18.54■□□□□ 0.56
GTF2I-208ENST00000482232 POLA2Q14181 598 aa18.54■□□□□ 0.56
GTF2I-208ENST00000482232 ZBTB12Q9Y330 459 aaPredicted RBP18.25■□□□□ 0.51
GTF2I-208ENST00000482232 MKRN4PQ13434 485 aaPredicted RBP18.19■□□□□ 0.5
GTF2I-208ENST00000482232 FBLN2P98095 1184 aa18.12■□□□□ 0.49
GTF2I-208ENST00000482232 OSCARQ8IYS5 282 aa17.9■□□□□ 0.46
GTF2I-208ENST00000482232 SPDYE2BA6NHP3 402 aa17.78■□□□□ 0.44
GTF2I-208ENST00000482232 SPDYE6P0CI01 402 aa17.78■□□□□ 0.44
GTF2I-208ENST00000482232 SPDYE2Q495Y8 402 aa17.78■□□□□ 0.44
GTF2I-208ENST00000482232 RBM42Q9BTD8 480 aaKnown RBP17.78■□□□□ 0.44
GTF2I-208ENST00000482232 SPDYE4A6NLX3 237 aa17.69■□□□□ 0.42
GTF2I-208ENST00000482232 SSUH2Q9Y2M2 353 aa17.68■□□□□ 0.42
GTF2I-208ENST00000482232 ZNF692Q9BU19 519 aaPredicted RBP17.65■□□□□ 0.42
GTF2I-208ENST00000482232 FKBP8Q14318 412 aa17.64■□□□□ 0.41
GTF2I-208ENST00000482232 AKT1S1Q96B36 256 aa17.58■□□□□ 0.4
GTF2I-208ENST00000482232 PROM2Q8N271 834 aa17.54■□□□□ 0.4
GTF2I-208ENST00000482232 PABPN1Q86U42 306 aaKnown RBP eCLIP17.41■□□□□ 0.38
GTF2I-208ENST00000482232 REM2Q8IYK8 340 aaPredicted RBP17.4■□□□□ 0.38
GTF2I-208ENST00000482232 SPDYE1Q8NFV5 336 aaPredicted RBP17.23■□□□□ 0.35
GTF2I-208ENST00000482232 PITPNM1O00562 1244 aa17.2■□□□□ 0.34
GTF2I-208ENST00000482232 STAG3Q9UJ98 1225 aa17.14■□□□□ 0.33
GTF2I-208ENST00000482232 CLEC11AQ9Y240 323 aa17.07■□□□□ 0.32
GTF2I-208ENST00000482232 FBXO3Q9UK99 471 aa17.06■□□□□ 0.32
GTF2I-208ENST00000482232 CHRDL2Q6WN34 429 aa17.05■□□□□ 0.32
GTF2I-208ENST00000482232 PRR29P0C7W0 189 aa16.96■□□□□ 0.31
GTF2I-208ENST00000482232 FXR2P51116 673 aaKnown RBP eCLIP16.93■□□□□ 0.3
GTF2I-208ENST00000482232 PIP4P2Q8N4L2 257 aa16.85■□□□□ 0.29
GTF2I-208ENST00000482232 VASPP50552 380 aaPredicted RBP16.84■□□□□ 0.29
GTF2I-208ENST00000482232 CREBZFQ9NS37 354 aa16.82■□□□□ 0.28
GTF2I-208ENST00000482232 PRKAR2AP13861 404 aaKnown RBP16.73■□□□□ 0.27
GTF2I-208ENST00000482232 MIER1Q8N108 512 aa16.73■□□□□ 0.27
GTF2I-208ENST00000482232 CHADLQ6NUI6 762 aa16.7■□□□□ 0.26
GTF2I-208ENST00000482232 MNX1P50219 401 aaPredicted RBP16.69■□□□□ 0.26
GTF2I-208ENST00000482232 PLCD3Q8N3E9 789 aa16.68■□□□□ 0.26
GTF2I-208ENST00000482232 PLEKHG5O94827 1062 aa16.63■□□□□ 0.25
GTF2I-208ENST00000482232 IFNLR1Q8IU57 520 aaPredicted RBP16.63■□□□□ 0.25
GTF2I-208ENST00000482232 FARP1Q9Y4F1 1045 aaPredicted RBP16.59■□□□□ 0.25
GTF2I-208ENST00000482232 POTEHQ6S545 545 aa16.57■□□□□ 0.24
GTF2I-208ENST00000482232 ZBTB47Q9UFB7 747 aaPredicted RBP16.57■□□□□ 0.24
GTF2I-208ENST00000482232 NPM1P06748 294 aaKnown RBP eCLIP16.47■□□□□ 0.23
GTF2I-208ENST00000482232 KLHL34Q8N239 644 aa16.46■□□□□ 0.23
GTF2I-208ENST00000482232 NUBP1P53384 320 aa16.42■□□□□ 0.22
GTF2I-208ENST00000482232 SPOCK2Q92563 424 aa16.4■□□□□ 0.22
GTF2I-208ENST00000482232 C19orf67A6NJJ6 358 aa16.35■□□□□ 0.21
GTF2I-208ENST00000482232 RASEFQ8IZ41 740 aa16.32■□□□□ 0.2
GTF2I-208ENST00000482232 CD44P16070 742 aaKnown RBP16.24■□□□□ 0.19
GTF2I-208ENST00000482232 HAX1O00165 279 aa16.23■□□□□ 0.19
GTF2I-208ENST00000482232 FAM212AQ96EL1 285 aa16.2■□□□□ 0.18
GTF2I-208ENST00000482232 EVX2Q03828 476 aa16.19■□□□□ 0.18
GTF2I-208ENST00000482232 GSE1Q14687 1217 aa16.17■□□□□ 0.18
GTF2I-208ENST00000482232 TSPYL2Q9H2G4 693 aaPredicted RBP16.16■□□□□ 0.18
GTF2I-208ENST00000482232 PAK3O75914 559 aaPredicted RBP16.15■□□□□ 0.18
GTF2I-208ENST00000482232 CCDC61Q9Y6R9 512 aa16.15■□□□□ 0.18
GTF2I-208ENST00000482232 DCAF8Q5TAQ9 597 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms