RNA–Protein interactions for RNA: ENST00000481935.5

ABCD4-211, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 2,336 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-211ENST00000481935 THEMISQ8N1K5 641 aaPredicted RBP17.73■□□□□ 0.43
ABCD4-211ENST00000481935 SLC52A1Q9NWF4 448 aa17.73■□□□□ 0.43
ABCD4-211ENST00000481935 PTPRTO14522 1441 aa17.72■□□□□ 0.43
ABCD4-211ENST00000481935 DDX10Q13206 875 aaKnown RBP17.72■□□□□ 0.43
ABCD4-211ENST00000481935 LTKP29376 864 aa17.71■□□□□ 0.43
ABCD4-211ENST00000481935 TRPM2O94759 1503 aa17.7■□□□□ 0.42
ABCD4-211ENST00000481935 HIRIP3Q9BW71 556 aaPredicted RBP17.7■□□□□ 0.42
ABCD4-211ENST00000481935 TSHZ2Q9NRE2 1034 aa17.7■□□□□ 0.42
ABCD4-211ENST00000481935 TMEM131LA2VDJ0 1609 aa17.69■□□□□ 0.42
ABCD4-211ENST00000481935 RGL3Q3MIN7 710 aa17.69■□□□□ 0.42
ABCD4-211ENST00000481935 ZNF326Q5BKZ1 582 aaKnown RBP17.69■□□□□ 0.42
ABCD4-211ENST00000481935 ADGRB3O60242 1522 aa17.68■□□□□ 0.42
ABCD4-211ENST00000481935 TXNDC2Q86VQ3 553 aa17.67■□□□□ 0.42
ABCD4-211ENST00000481935 CCDC144AA2RUR9 1427 aa17.66■□□□□ 0.42
ABCD4-211ENST00000481935 NBPF8Q3BBV2 869 aa17.66■□□□□ 0.42
ABCD4-211ENST00000481935 CCER2I3L3R5 266 aa17.66■□□□□ 0.42
ABCD4-211ENST00000481935 ANKLE2Q86XL3 938 aa17.66■□□□□ 0.42
ABCD4-211ENST00000481935 TMEM2Q9UHN6 1383 aa17.66■□□□□ 0.42
ABCD4-211ENST00000481935 KIF1BO60333 1816 aa17.65■□□□□ 0.42
ABCD4-211ENST00000481935 POLR1AO95602 1720 aaPredicted RBP17.64■□□□□ 0.41
ABCD4-211ENST00000481935 NEURL4Q96JN8 1562 aa17.63■□□□□ 0.41
ABCD4-211ENST00000481935 ANP32CO43423 234 aa17.63■□□□□ 0.41
ABCD4-211ENST00000481935 BCANQ96GW7 911 aa17.63■□□□□ 0.41
ABCD4-211ENST00000481935 RIMS2Q9UQ26 1411 aa17.61■□□□□ 0.41
ABCD4-211ENST00000481935 EID1Q9Y6B2 187 aa17.61■□□□□ 0.41
ABCD4-211ENST00000481935 SLC26A8Q96RN1 970 aa17.61■□□□□ 0.41
ABCD4-211ENST00000481935 SCAF11Q99590 1463 aaKnown RBP17.61■□□□□ 0.41
ABCD4-211ENST00000481935 SLIT1O75093 1534 aa17.6■□□□□ 0.41
ABCD4-211ENST00000481935 ARHGAP23Q9P227 1491 aa17.6■□□□□ 0.41
ABCD4-211ENST00000481935 KDM5AP29375 1690 aaKnown RBP17.59■□□□□ 0.41
ABCD4-211ENST00000481935 ZFYVE9O95405 1425 aa17.59■□□□□ 0.41
ABCD4-211ENST00000481935 FKBP8Q14318 412 aa17.59■□□□□ 0.41
ABCD4-211ENST00000481935 NEFLP07196 543 aa17.58■□□□□ 0.4
ABCD4-211ENST00000481935 NPHP4O75161 1426 aaPredicted RBP17.58■□□□□ 0.4
ABCD4-211ENST00000481935 ZNF335Q9H4Z2 1342 aaPredicted RBP17.57■□□□□ 0.4
ABCD4-211ENST00000481935 IQGAP1P46940 1657 aa17.56■□□□□ 0.4
ABCD4-211ENST00000481935 SPATA31E1Q6ZUB1 1445 aa17.55■□□□□ 0.4
ABCD4-211ENST00000481935 ANP32EQ9BTT0 268 aa17.55■□□□□ 0.4
ABCD4-211ENST00000481935 NEXMIFQ5QGS0 1516 aa17.55■□□□□ 0.4
ABCD4-211ENST00000481935 KDM2AQ9Y2K7 1162 aa17.54■□□□□ 0.4
ABCD4-211ENST00000481935 DCAF11Q8TEB1 546 aa17.54■□□□□ 0.4
ABCD4-211ENST00000481935 DMRT2Q9Y5R5 561 aa17.54■□□□□ 0.4
ABCD4-211ENST00000481935 HSPA5P11021 654 aaKnown RBP17.53■□□□□ 0.4
ABCD4-211ENST00000481935 MED14O60244 1454 aa17.52■□□□□ 0.4
ABCD4-211ENST00000481935 ADGRF5Q8IZF2 1346 aa17.52■□□□□ 0.4
ABCD4-211ENST00000481935 BCL11AQ9H165 835 aa17.52■□□□□ 0.39
ABCD4-211ENST00000481935 RBM33Q96EV2 1170 aaKnown RBP17.51■□□□□ 0.39
ABCD4-211ENST00000481935 PPLO60437 1756 aa17.51■□□□□ 0.39
ABCD4-211ENST00000481935 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.49■□□□□ 0.39
ABCD4-211ENST00000481935 HDGFP51858 240 aaKnown RBP17.49■□□□□ 0.39
ABCD4-211ENST00000481935 EIF4G2P78344 907 aaKnown RBP eCLIP17.49■□□□□ 0.39
ABCD4-211ENST00000481935 PLEKHG1Q9ULL1 1385 aa17.48■□□□□ 0.39
ABCD4-211ENST00000481935 STRCP1A6NGW2 1772 aa17.47■□□□□ 0.39
ABCD4-211ENST00000481935 IFT172Q9UG01 1749 aa17.47■□□□□ 0.39
ABCD4-211ENST00000481935 NRXN3Q9Y4C0 1643 aa17.46■□□□□ 0.39
ABCD4-211ENST00000481935 VGFO15240 615 aaPredicted RBP17.46■□□□□ 0.39
ABCD4-211ENST00000481935 RALGAPBQ86X10 1494 aa17.46■□□□□ 0.39
ABCD4-211ENST00000481935 ADAMTS13Q76LX8 1427 aa17.46■□□□□ 0.39
ABCD4-211ENST00000481935 PRAG1Q86YV5 1406 aa17.45■□□□□ 0.38
ABCD4-211ENST00000481935 METP08581 1390 aa17.43■□□□□ 0.38
ABCD4-211ENST00000481935 RPGRIP1LQ68CZ1 1315 aa17.43■□□□□ 0.38
ABCD4-211ENST00000481935 C11orf95C9JLR9 678 aaPredicted RBP17.43■□□□□ 0.38
ABCD4-211ENST00000481935 TMEM132EQ6IEE7 984 aa17.43■□□□□ 0.38
ABCD4-211ENST00000481935 WASHC2AQ641Q2 1341 aa17.42■□□□□ 0.38
ABCD4-211ENST00000481935 TRPM1Q7Z4N2 1603 aa17.42■□□□□ 0.38
ABCD4-211ENST00000481935 USP47Q96K76 1375 aa17.42■□□□□ 0.38
ABCD4-211ENST00000481935 CFAP70Q5T0N1 1121 aa17.41■□□□□ 0.38
ABCD4-211ENST00000481935 LTBP4Q8N2S1 1624 aa17.4■□□□□ 0.38
ABCD4-211ENST00000481935 KCNA6P17658 529 aa17.39■□□□□ 0.38
ABCD4-211ENST00000481935 SETBP1Q9Y6X0 1596 aa17.39■□□□□ 0.37
ABCD4-211ENST00000481935 STK26Q9P289 416 aa17.39■□□□□ 0.37
ABCD4-211ENST00000481935 TBX22Q9Y458 520 aa17.39■□□□□ 0.37
ABCD4-211ENST00000481935 PTPRUQ92729 1446 aa17.39■□□□□ 0.37
ABCD4-211ENST00000481935 ALKQ9UM73 1620 aa17.39■□□□□ 0.37
ABCD4-211ENST00000481935 NBPF1Q3BBV0 1214 aa17.38■□□□□ 0.37
ABCD4-211ENST00000481935 CARD11Q9BXL7 1154 aa17.38■□□□□ 0.37
ABCD4-211ENST00000481935 ROCK2O75116 1388 aaKnown RBP17.38■□□□□ 0.37
ABCD4-211ENST00000481935 PIK3C2GO75747 1445 aa17.37■□□□□ 0.37
ABCD4-211ENST00000481935 AMOTL2Q9Y2J4 779 aa17.37■□□□□ 0.37
ABCD4-211ENST00000481935 CCDC7Q96M83 1385 aa17.37■□□□□ 0.37
ABCD4-211ENST00000481935 CHD2O14647 1828 aaKnown RBP17.37■□□□□ 0.37
ABCD4-211ENST00000481935 SETD1AO15047 1707 aaKnown RBP17.36■□□□□ 0.37
ABCD4-211ENST00000481935 CERKQ8TCT0 537 aa17.36■□□□□ 0.37
ABCD4-211ENST00000481935 RBM19Q9Y4C8 960 aaKnown RBP17.36■□□□□ 0.37
ABCD4-211ENST00000481935 MYOM2P54296 1465 aa17.34■□□□□ 0.37
ABCD4-211ENST00000481935 PROSER2Q86WR7 435 aaPredicted RBP17.34■□□□□ 0.37
ABCD4-211ENST00000481935 ASXL1Q8IXJ9 1541 aa17.33■□□□□ 0.36
ABCD4-211ENST00000481935 KIF7Q2M1P5 1343 aa17.32■□□□□ 0.36
ABCD4-211ENST00000481935 LRRC7Q96NW7 1537 aa17.32■□□□□ 0.36
ABCD4-211ENST00000481935 NRXN1Q9ULB1 1477 aa17.32■□□□□ 0.36
ABCD4-211ENST00000481935 DIP2AQ14689 1571 aa17.32■□□□□ 0.36
ABCD4-211ENST00000481935 XIRP1Q702N8 1843 aaKnown RBP17.31■□□□□ 0.36
ABCD4-211ENST00000481935 ST20-MTHFSA0A0A6YYL1 179 aa17.31■□□□□ 0.36
ABCD4-211ENST00000481935 HNRNPUQ00839 825 aaKnown RBP eCLIP17.31■□□□□ 0.36
ABCD4-211ENST00000481935 C14orf93Q9H972 538 aaKnown RBP17.31■□□□□ 0.36
ABCD4-211ENST00000481935 TMEM94Q12767 1356 aa17.31■□□□□ 0.36
ABCD4-211ENST00000481935 GPRASP1Q5JY77 1395 aa17.31■□□□□ 0.36
ABCD4-211ENST00000481935 SAFB2Q14151 953 aaKnown RBP eCLIP17.3■□□□□ 0.36
ABCD4-211ENST00000481935 WAPLQ7Z5K2 1190 aa17.29■□□□□ 0.36
ABCD4-211ENST00000481935 C14orf37Q86TY3 774 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms