RNA–Protein interactions for RNA: ENST00000481605.5

TTC3-217, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 1,540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-217ENST00000481605 CHGAP10645 457 aaKnown RBP35.68■■■■□ 3.3
TTC3-217ENST00000481605 BCANQ96GW7 911 aa35.68■■■■□ 3.3
TTC3-217ENST00000481605 RIMS2Q9UQ26 1411 aa35.67■■■■□ 3.3
TTC3-217ENST00000481605 KCNA6P17658 529 aa35.65■■■■□ 3.3
TTC3-217ENST00000481605 HDGFP51858 240 aaKnown RBP35.65■■■■□ 3.3
TTC3-217ENST00000481605 SENP3Q9H4L4 574 aaPredicted RBP35.65■■■■□ 3.3
TTC3-217ENST00000481605 PPP1R15AO75807 674 aaPredicted RBP35.63■■■■□ 3.29
TTC3-217ENST00000481605 PLEKHG1Q9ULL1 1385 aa35.62■■■■□ 3.29
TTC3-217ENST00000481605 XIRP1Q702N8 1843 aaKnown RBP35.61■■■■□ 3.29
TTC3-217ENST00000481605 ILDR2Q71H61 639 aa35.58■■■■□ 3.29
TTC3-217ENST00000481605 NAIPQ13075 1403 aa35.58■■■■□ 3.29
TTC3-217ENST00000481605 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.57■■■■□ 3.29
TTC3-217ENST00000481605 TMEM94Q12767 1356 aa35.57■■■■□ 3.28
TTC3-217ENST00000481605 PROSER2Q86WR7 435 aaPredicted RBP35.54■■■■□ 3.28
TTC3-217ENST00000481605 NUTM2DQ5VT03 806 aaPredicted RBP35.53■■■■□ 3.28
TTC3-217ENST00000481605 NWD1Q149M9 1564 aa35.53■■■■□ 3.28
TTC3-217ENST00000481605 RBM33Q96EV2 1170 aaKnown RBP35.52■■■■□ 3.28
TTC3-217ENST00000481605 NKTRP30414 1462 aaKnown RBP35.51■■■■□ 3.28
TTC3-217ENST00000481605 SPHKAPQ2M3C7 1700 aa35.5■■■■□ 3.27
TTC3-217ENST00000481605 TBX22Q9Y458 520 aa35.48■■■■□ 3.27
TTC3-217ENST00000481605 HFM1A2PYH4 1435 aa35.45■■■■□ 3.27
TTC3-217ENST00000481605 CHD2O14647 1828 aaKnown RBP35.43■■■■□ 3.26
TTC3-217ENST00000481605 ADAMTS13Q76LX8 1427 aa35.43■■■■□ 3.26
TTC3-217ENST00000481605 MED1Q15648 1581 aaPredicted RBP35.4■■■■□ 3.26
TTC3-217ENST00000481605 TRIM52Q96A61 297 aa35.4■■■■□ 3.26
TTC3-217ENST00000481605 DIP2AQ14689 1571 aa35.38■■■■□ 3.25
TTC3-217ENST00000481605 ZNF326Q5BKZ1 582 aaKnown RBP35.37■■■■□ 3.25
TTC3-217ENST00000481605 FAM135BQ49AJ0 1406 aa35.37■■■■□ 3.25
TTC3-217ENST00000481605 MSH6P52701 1360 aa35.37■■■■□ 3.25
TTC3-217ENST00000481605 TRPM2O94759 1503 aa35.36■■■■□ 3.25
TTC3-217ENST00000481605 CLTCL1P53675 1640 aa35.34■■■■□ 3.25
TTC3-217ENST00000481605 PIK3R4Q99570 1358 aa35.34■■■■□ 3.25
TTC3-217ENST00000481605 SOCS7O14512 581 aa35.29■■■■□ 3.24
TTC3-217ENST00000481605 SLC4A1APQ9BWU0 796 aaKnown RBP35.29■■■■□ 3.24
TTC3-217ENST00000481605 ROBO1Q9Y6N7 1651 aa35.27■■■■□ 3.24
TTC3-217ENST00000481605 NCOA3Q9Y6Q9 1424 aa35.26■■■■□ 3.24
TTC3-217ENST00000481605 AMOTL2Q9Y2J4 779 aa35.25■■■■□ 3.23
TTC3-217ENST00000481605 SETBP1Q9Y6X0 1596 aa35.25■■■■□ 3.23
TTC3-217ENST00000481605 NRXN3Q9Y4C0 1643 aa35.25■■■■□ 3.23
TTC3-217ENST00000481605 PTPRUQ92729 1446 aa35.24■■■■□ 3.23
TTC3-217ENST00000481605 C14orf37Q86TY3 774 aa35.24■■■■□ 3.23
TTC3-217ENST00000481605 SLAIN2Q9P270 581 aa35.24■■■■□ 3.23
TTC3-217ENST00000481605 NEXMIFQ5QGS0 1516 aa35.22■■■■□ 3.23
TTC3-217ENST00000481605 KIF1BO60333 1816 aa35.22■■■■□ 3.23
TTC3-217ENST00000481605 PHF23Q9BUL5 403 aaPredicted RBP35.2■■■■□ 3.23
TTC3-217ENST00000481605 C19orf44Q9H6X5 657 aa35.16■■■■□ 3.22
TTC3-217ENST00000481605 METP08581 1390 aa35.15■■■■□ 3.22
TTC3-217ENST00000481605 FOXD1Q16676 465 aa35.13■■■■□ 3.21
TTC3-217ENST00000481605 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.12■■■■□ 3.21
TTC3-217ENST00000481605 CADPS2Q86UW7 1296 aa35.12■■■■□ 3.21
TTC3-217ENST00000481605 XRN1Q8IZH2 1706 aaKnown RBP35.12■■■■□ 3.21
TTC3-217ENST00000481605 ATF3P18847 181 aa35.11■■■■□ 3.21
TTC3-217ENST00000481605 VGFO15240 615 aaPredicted RBP35.09■■■■□ 3.21
TTC3-217ENST00000481605 RPGRIP1LQ68CZ1 1315 aa35.05■■■■□ 3.2
TTC3-217ENST00000481605 PHLPP1O60346 1717 aa35.05■■■■□ 3.2
TTC3-217ENST00000481605 MPHOSPH9Q99550 1183 aa35.05■■■■□ 3.2
TTC3-217ENST00000481605 DCCP43146 1447 aa35■■■■□ 3.19
TTC3-217ENST00000481605 CCDC144AA2RUR9 1427 aa34.99■■■■□ 3.19
TTC3-217ENST00000481605 PPLO60437 1756 aa34.96■■■■□ 3.19
TTC3-217ENST00000481605 SETD5Q9C0A6 1442 aa34.96■■■■□ 3.19
TTC3-217ENST00000481605 JCADQ9P266 1359 aa34.96■■■■□ 3.19
TTC3-217ENST00000481605 COL16A1Q07092 1604 aaPredicted RBP34.95■■■■□ 3.19
TTC3-217ENST00000481605 RGS17Q9UGC6 210 aaPredicted RBP34.95■■■■□ 3.19
TTC3-217ENST00000481605 SETD1AO15047 1707 aaKnown RBP34.94■■■■□ 3.18
TTC3-217ENST00000481605 BRINP3Q76B58 766 aa34.93■■■■□ 3.18
TTC3-217ENST00000481605 ACIN1Q9UKV3 1341 aaKnown RBP34.92■■■■□ 3.18
TTC3-217ENST00000481605 ADGRL3Q9HAR2 1447 aa34.92■■■■□ 3.18
TTC3-217ENST00000481605 RGL3Q3MIN7 710 aa34.91■■■■□ 3.18
TTC3-217ENST00000481605 AHDC1Q5TGY3 1603 aaPredicted RBP34.91■■■■□ 3.18
TTC3-217ENST00000481605 MST1RQ04912 1400 aa34.89■■■■□ 3.18
TTC3-217ENST00000481605 SPATA31E1Q6ZUB1 1445 aa34.89■■■■□ 3.18
TTC3-217ENST00000481605 PTCH1Q13635 1447 aa34.88■■■■□ 3.17
TTC3-217ENST00000481605 NALCNQ8IZF0 1738 aa34.87■■■■□ 3.17
TTC3-217ENST00000481605 ROBO2Q9HCK4 1378 aa34.86■■■■□ 3.17
TTC3-217ENST00000481605 ADGRF5Q8IZF2 1346 aa34.85■■■■□ 3.17
TTC3-217ENST00000481605 ASXL1Q8IXJ9 1541 aa34.84■■■■□ 3.17
TTC3-217ENST00000481605 RAB3GAP2Q9H2M9 1393 aa34.83■■■■□ 3.17
TTC3-217ENST00000481605 PRAG1Q86YV5 1406 aa34.82■■■■□ 3.16
TTC3-217ENST00000481605 ANKRD30BQ9BXX2 1392 aa34.82■■■■□ 3.16
TTC3-217ENST00000481605 SPATA31A6Q5VVP1 1343 aa34.79■■■■□ 3.16
TTC3-217ENST00000481605 IFT172Q9UG01 1749 aa34.78■■■■□ 3.16
TTC3-217ENST00000481605 POTEAQ6S8J7 498 aa34.76■■■■□ 3.16
TTC3-217ENST00000481605 SHPRHQ149N8 1683 aa34.75■■■■□ 3.15
TTC3-217ENST00000481605 LRP6O75581 1613 aa34.73■■■■□ 3.15
TTC3-217ENST00000481605 NHSL1Q5SYE7 1610 aa34.73■■■■□ 3.15
TTC3-217ENST00000481605 C1orf167Q5SNV9 1468 aa34.73■■■■□ 3.15
TTC3-217ENST00000481605 DDX17Q92841 729 aaKnown RBP34.71■■■■□ 3.15
TTC3-217ENST00000481605 PIK3C2GO75747 1445 aa34.7■■■■□ 3.15
TTC3-217ENST00000481605 MEX3CQ5U5Q3 659 aaKnown RBP34.69■■■■□ 3.14
TTC3-217ENST00000481605 STK26Q9P289 416 aa34.69■■■■□ 3.14
TTC3-217ENST00000481605 TMEM132EQ6IEE7 984 aa34.66■■■■□ 3.14
TTC3-217ENST00000481605 LRRC59Q96AG4 307 aaKnown RBP34.66■■■■□ 3.14
TTC3-217ENST00000481605 LRPPRCP42704 1394 aaKnown RBP34.65■■■■□ 3.14
TTC3-217ENST00000481605 ORAI2Q96SN7 254 aa34.64■■■■□ 3.14
TTC3-217ENST00000481605 TECPR2O15040 1411 aa34.64■■■■□ 3.14
TTC3-217ENST00000481605 NUTM2BA6NNL0 878 aaPredicted RBP34.63■■■■□ 3.13
TTC3-217ENST00000481605 NUTM2EB1AL46 878 aaPredicted RBP34.63■■■■□ 3.13
TTC3-217ENST00000481605 NUTM2AQ8IVF1 878 aaPredicted RBP34.63■■■■□ 3.13
TTC3-217ENST00000481605 ABCC11Q96J66 1382 aa34.62■■■■□ 3.13
TTC3-217ENST00000481605 WAPLQ7Z5K2 1190 aa34.61■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms