RNA–Protein interactions for RNA: ENST00000481573.1

SEC61B-202, Transcript of Sec61 translocon beta subunit, humanhuman

TSL 2

Gene SEC61B, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-202ENST00000481573 NEUROD1Q13562 356 aa19.22■□□□□ 0.67
SEC61B-202ENST00000481573 ARHGAP23Q9P227 1491 aa19.22■□□□□ 0.67
SEC61B-202ENST00000481573 CHGAP10645 457 aaKnown RBP19.21■□□□□ 0.67
SEC61B-202ENST00000481573 ZFYVE9O95405 1425 aa19.2■□□□□ 0.66
SEC61B-202ENST00000481573 STRCQ7RTU9 1775 aa19.19■□□□□ 0.66
SEC61B-202ENST00000481573 RGL3Q3MIN7 710 aa19.17■□□□□ 0.66
SEC61B-202ENST00000481573 STAG3Q9UJ98 1225 aa19.17■□□□□ 0.66
SEC61B-202ENST00000481573 TMEM2Q9UHN6 1383 aa19.17■□□□□ 0.66
SEC61B-202ENST00000481573 RIMS2Q9UQ26 1411 aa19.17■□□□□ 0.66
SEC61B-202ENST00000481573 IQGAP1P46940 1657 aa19.16■□□□□ 0.66
SEC61B-202ENST00000481573 NRXN3Q9Y4C0 1643 aa19.15■□□□□ 0.66
SEC61B-202ENST00000481573 MYOM2P54296 1465 aa19.15■□□□□ 0.66
SEC61B-202ENST00000481573 HSPA2P54652 639 aa19.14■□□□□ 0.65
SEC61B-202ENST00000481573 SETD1AO15047 1707 aaKnown RBP19.14■□□□□ 0.65
SEC61B-202ENST00000481573 ZNF326Q5BKZ1 582 aaKnown RBP19.13■□□□□ 0.65
SEC61B-202ENST00000481573 THEMISQ8N1K5 641 aaPredicted RBP19.13■□□□□ 0.65
SEC61B-202ENST00000481573 L3MBTL2Q969R5 705 aa19.13■□□□□ 0.65
SEC61B-202ENST00000481573 NRXN1Q9ULB1 1477 aa19.12■□□□□ 0.65
SEC61B-202ENST00000481573 TONSLQ96HA7 1378 aa19.12■□□□□ 0.65
SEC61B-202ENST00000481573 SCAF11Q99590 1463 aaKnown RBP19.11■□□□□ 0.65
SEC61B-202ENST00000481573 RPGRIP1LQ68CZ1 1315 aa19.11■□□□□ 0.65
SEC61B-202ENST00000481573 LTKP29376 864 aa19.1■□□□□ 0.65
SEC61B-202ENST00000481573 NUTM2DQ5VT03 806 aaPredicted RBP19.1■□□□□ 0.65
SEC61B-202ENST00000481573 KIAA1210Q9ULL0 1709 aa19.08■□□□□ 0.65
SEC61B-202ENST00000481573 TRPM1Q7Z4N2 1603 aa19.08■□□□□ 0.65
SEC61B-202ENST00000481573 SETBP1Q9Y6X0 1596 aa19.08■□□□□ 0.65
SEC61B-202ENST00000481573 DCAF11Q8TEB1 546 aa19.08■□□□□ 0.64
SEC61B-202ENST00000481573 ADGRF5Q8IZF2 1346 aa19.07■□□□□ 0.64
SEC61B-202ENST00000481573 LAMC1P11047 1609 aa19.07■□□□□ 0.64
SEC61B-202ENST00000481573 MED14O60244 1454 aa19.06■□□□□ 0.64
SEC61B-202ENST00000481573 PIK3C2GO75747 1445 aa19.06■□□□□ 0.64
SEC61B-202ENST00000481573 PRAG1Q86YV5 1406 aa19.06■□□□□ 0.64
SEC61B-202ENST00000481573 TXNDC2Q86VQ3 553 aa19.05■□□□□ 0.64
SEC61B-202ENST00000481573 KDM2AQ9Y2K7 1162 aa19.05■□□□□ 0.64
SEC61B-202ENST00000481573 TIMELESSQ9UNS1 1208 aa19.04■□□□□ 0.64
SEC61B-202ENST00000481573 PLEKHG1Q9ULL1 1385 aa19.04■□□□□ 0.64
SEC61B-202ENST00000481573 ALKQ9UM73 1620 aa19.03■□□□□ 0.64
SEC61B-202ENST00000481573 NCKAP5LQ9HCH0 1330 aa19.03■□□□□ 0.64
SEC61B-202ENST00000481573 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.03■□□□□ 0.64
SEC61B-202ENST00000481573 ASXL1Q8IXJ9 1541 aa19.02■□□□□ 0.64
SEC61B-202ENST00000481573 VGFO15240 615 aaPredicted RBP19.02■□□□□ 0.64
SEC61B-202ENST00000481573 ANKLE2Q86XL3 938 aa19.02■□□□□ 0.64
SEC61B-202ENST00000481573 EID1Q9Y6B2 187 aa19.02■□□□□ 0.64
SEC61B-202ENST00000481573 NPHP4O75161 1426 aaPredicted RBP19.01■□□□□ 0.63
SEC61B-202ENST00000481573 ADAMTS13Q76LX8 1427 aa19.01■□□□□ 0.63
SEC61B-202ENST00000481573 MSH5O43196 834 aa19.01■□□□□ 0.63
SEC61B-202ENST00000481573 DIP2AQ14689 1571 aa19.01■□□□□ 0.63
SEC61B-202ENST00000481573 PPP1R15AO75807 674 aaPredicted RBP19■□□□□ 0.63
SEC61B-202ENST00000481573 NBPF8Q3BBV2 869 aa19■□□□□ 0.63
SEC61B-202ENST00000481573 CHD2O14647 1828 aaKnown RBP19■□□□□ 0.63
SEC61B-202ENST00000481573 HDGFP51858 240 aaKnown RBP18.99■□□□□ 0.63
SEC61B-202ENST00000481573 STAC3Q96MF2 364 aa18.99■□□□□ 0.63
SEC61B-202ENST00000481573 ADGRB1O14514 1584 aa18.98■□□□□ 0.63
SEC61B-202ENST00000481573 STRCP1A6NGW2 1772 aa18.97■□□□□ 0.63
SEC61B-202ENST00000481573 RALGAPBQ86X10 1494 aa18.96■□□□□ 0.63
SEC61B-202ENST00000481573 KNDC1Q76NI1 1749 aa18.95■□□□□ 0.62
SEC61B-202ENST00000481573 XRN1Q8IZH2 1706 aaKnown RBP18.94■□□□□ 0.62
SEC61B-202ENST00000481573 CFAP70Q5T0N1 1121 aa18.93■□□□□ 0.62
SEC61B-202ENST00000481573 C14orf93Q9H972 538 aaKnown RBP18.93■□□□□ 0.62
SEC61B-202ENST00000481573 ARHGEF28Q8N1W1 1705 aaKnown RBP18.92■□□□□ 0.62
SEC61B-202ENST00000481573 PIAS4Q8N2W9 510 aaPredicted RBP18.92■□□□□ 0.62
SEC61B-202ENST00000481573 SLC26A8Q96RN1 970 aa18.92■□□□□ 0.62
SEC61B-202ENST00000481573 NWD1Q149M9 1564 aa18.91■□□□□ 0.62
SEC61B-202ENST00000481573 METP08581 1390 aa18.91■□□□□ 0.62
SEC61B-202ENST00000481573 NBPF1Q3BBV0 1214 aa18.89■□□□□ 0.61
SEC61B-202ENST00000481573 BCANQ96GW7 911 aa18.89■□□□□ 0.61
SEC61B-202ENST00000481573 TBX22Q9Y458 520 aa18.89■□□□□ 0.61
SEC61B-202ENST00000481573 PTPRUQ92729 1446 aa18.89■□□□□ 0.61
SEC61B-202ENST00000481573 GPRASP1Q5JY77 1395 aa18.88■□□□□ 0.61
SEC61B-202ENST00000481573 ZEB1P37275 1124 aaPredicted RBP18.86■□□□□ 0.61
SEC61B-202ENST00000481573 TMEM132EQ6IEE7 984 aa18.86■□□□□ 0.61
SEC61B-202ENST00000481573 XIRP1Q702N8 1843 aaKnown RBP18.86■□□□□ 0.61
SEC61B-202ENST00000481573 CPS1P31327 1500 aa18.85■□□□□ 0.61
SEC61B-202ENST00000481573 ROCK2O75116 1388 aaKnown RBP18.85■□□□□ 0.61
SEC61B-202ENST00000481573 YTHDC2Q9H6S0 1430 aaKnown RBP18.84■□□□□ 0.61
SEC61B-202ENST00000481573 PIK3R4Q99570 1358 aa18.84■□□□□ 0.61
SEC61B-202ENST00000481573 LRPPRCP42704 1394 aaKnown RBP18.82■□□□□ 0.6
SEC61B-202ENST00000481573 ADRA2BP18089 450 aa18.82■□□□□ 0.6
SEC61B-202ENST00000481573 DLC1Q96QB1 1528 aa18.82■□□□□ 0.6
SEC61B-202ENST00000481573 QRICH2Q9H0J4 1663 aa18.82■□□□□ 0.6
SEC61B-202ENST00000481573 TECPR2O15040 1411 aa18.82■□□□□ 0.6
SEC61B-202ENST00000481573 DMRT2Q9Y5R5 561 aa18.81■□□□□ 0.6
SEC61B-202ENST00000481573 NALCNQ8IZF0 1738 aa18.78■□□□□ 0.6
SEC61B-202ENST00000481573 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.78■□□□□ 0.6
SEC61B-202ENST00000481573 PTCH1Q13635 1447 aa18.78■□□□□ 0.6
SEC61B-202ENST00000481573 ABCC11Q96J66 1382 aa18.78■□□□□ 0.6
SEC61B-202ENST00000481573 LTBP4Q8N2S1 1624 aa18.78■□□□□ 0.6
SEC61B-202ENST00000481573 NKTRP30414 1462 aaKnown RBP18.77■□□□□ 0.6
SEC61B-202ENST00000481573 ZNF335Q9H4Z2 1342 aaPredicted RBP18.77■□□□□ 0.6
SEC61B-202ENST00000481573 CARD11Q9BXL7 1154 aa18.77■□□□□ 0.6
SEC61B-202ENST00000481573 KCNA6P17658 529 aa18.76■□□□□ 0.59
SEC61B-202ENST00000481573 STK26Q9P289 416 aa18.76■□□□□ 0.59
SEC61B-202ENST00000481573 AMOTL2Q9Y2J4 779 aa18.76■□□□□ 0.59
SEC61B-202ENST00000481573 ROBO2Q9HCK4 1378 aa18.76■□□□□ 0.59
SEC61B-202ENST00000481573 TRAK1Q9UPV9 953 aa18.74■□□□□ 0.59
SEC61B-202ENST00000481573 USP47Q96K76 1375 aa18.73■□□□□ 0.59
SEC61B-202ENST00000481573 PLEKHH1Q9ULM0 1364 aa18.73■□□□□ 0.59
SEC61B-202ENST00000481573 FAM135BQ49AJ0 1406 aa18.73■□□□□ 0.59
SEC61B-202ENST00000481573 LRRC7Q96NW7 1537 aa18.71■□□□□ 0.59
SEC61B-202ENST00000481573 ADGRB2O60241 1585 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms