RNA–Protein interactions for RNA: ENST00000481461.1

PLOD3-214, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 4

Gene PLOD3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-214ENST00000481461 ROCK1Q13464 1354 aa28.67■■■□□ 2.18
PLOD3-214ENST00000481461 KCNA6P17658 529 aa28.67■■■□□ 2.18
PLOD3-214ENST00000481461 RBM33Q96EV2 1170 aaKnown RBP28.67■■■□□ 2.18
PLOD3-214ENST00000481461 TMEM94Q12767 1356 aa28.65■■■□□ 2.18
PLOD3-214ENST00000481461 PPP1R15AO75807 674 aaPredicted RBP28.65■■■□□ 2.18
PLOD3-214ENST00000481461 E9PCH4 1651 aa28.64■■■□□ 2.18
PLOD3-214ENST00000481461 PROSER2Q86WR7 435 aaPredicted RBP28.64■■■□□ 2.18
PLOD3-214ENST00000481461 RIMS2Q9UQ26 1411 aa28.62■■■□□ 2.17
PLOD3-214ENST00000481461 TMEM131LA2VDJ0 1609 aa28.61■■■□□ 2.17
PLOD3-214ENST00000481461 PHF23Q9BUL5 403 aaPredicted RBP28.61■■■□□ 2.17
PLOD3-214ENST00000481461 IQGAP3Q86VI3 1631 aa28.61■■■□□ 2.17
PLOD3-214ENST00000481461 NUP155O75694 1391 aa28.61■■■□□ 2.17
PLOD3-214ENST00000481461 ZFYVE9O95405 1425 aa28.6■■■□□ 2.17
PLOD3-214ENST00000481461 HDGFP51858 240 aaKnown RBP28.59■■■□□ 2.17
PLOD3-214ENST00000481461 NUTM2DQ5VT03 806 aaPredicted RBP28.59■■■□□ 2.17
PLOD3-214ENST00000481461 PLEKHG1Q9ULL1 1385 aa28.57■■■□□ 2.16
PLOD3-214ENST00000481461 NWD1Q149M9 1564 aa28.54■■■□□ 2.16
PLOD3-214ENST00000481461 NKTRP30414 1462 aaKnown RBP28.53■■■□□ 2.16
PLOD3-214ENST00000481461 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.52■■■□□ 2.16
PLOD3-214ENST00000481461 CHD2O14647 1828 aaKnown RBP28.5■■■□□ 2.15
PLOD3-214ENST00000481461 FAM135BQ49AJ0 1406 aa28.5■■■□□ 2.15
PLOD3-214ENST00000481461 MSH6P52701 1360 aa28.49■■■□□ 2.15
PLOD3-214ENST00000481461 ROBO1Q9Y6N7 1651 aa28.48■■■□□ 2.15
PLOD3-214ENST00000481461 TBX22Q9Y458 520 aa28.46■■■□□ 2.15
PLOD3-214ENST00000481461 C14orf37Q86TY3 774 aa28.43■■■□□ 2.14
PLOD3-214ENST00000481461 ADAMTS13Q76LX8 1427 aa28.42■■■□□ 2.14
PLOD3-214ENST00000481461 SPHKAPQ2M3C7 1700 aa28.41■■■□□ 2.14
PLOD3-214ENST00000481461 SLAIN2Q9P270 581 aa28.4■■■□□ 2.14
PLOD3-214ENST00000481461 RRBP1Q9P2E9 1410 aaKnown RBP28.38■■■□□ 2.13
PLOD3-214ENST00000481461 ZNF326Q5BKZ1 582 aaKnown RBP28.38■■■□□ 2.13
PLOD3-214ENST00000481461 DIP2AQ14689 1571 aa28.37■■■□□ 2.13
PLOD3-214ENST00000481461 TRPM2O94759 1503 aa28.33■■■□□ 2.13
PLOD3-214ENST00000481461 PHLPP1O60346 1717 aa28.32■■■□□ 2.12
PLOD3-214ENST00000481461 AMOTL2Q9Y2J4 779 aa28.32■■■□□ 2.12
PLOD3-214ENST00000481461 PIK3R4Q99570 1358 aa28.32■■■□□ 2.12
PLOD3-214ENST00000481461 NAIPQ13075 1403 aa28.32■■■□□ 2.12
PLOD3-214ENST00000481461 TRIM52Q96A61 297 aa28.3■■■□□ 2.12
PLOD3-214ENST00000481461 RGS17Q9UGC6 210 aaPredicted RBP28.3■■■□□ 2.12
PLOD3-214ENST00000481461 PTPRUQ92729 1446 aa28.29■■■□□ 2.12
PLOD3-214ENST00000481461 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.29■■■□□ 2.12
PLOD3-214ENST00000481461 CLTCL1P53675 1640 aa28.29■■■□□ 2.12
PLOD3-214ENST00000481461 NCOA3Q9Y6Q9 1424 aa28.28■■■□□ 2.12
PLOD3-214ENST00000481461 ATF3P18847 181 aa28.27■■■□□ 2.12
PLOD3-214ENST00000481461 C19orf44Q9H6X5 657 aa28.27■■■□□ 2.12
PLOD3-214ENST00000481461 NRXN3Q9Y4C0 1643 aa28.26■■■□□ 2.11
PLOD3-214ENST00000481461 CADPS2Q86UW7 1296 aa28.25■■■□□ 2.11
PLOD3-214ENST00000481461 SETBP1Q9Y6X0 1596 aa28.23■■■□□ 2.11
PLOD3-214ENST00000481461 KIF1BO60333 1816 aa28.22■■■□□ 2.11
PLOD3-214ENST00000481461 JCADQ9P266 1359 aa28.21■■■□□ 2.11
PLOD3-214ENST00000481461 METP08581 1390 aa28.2■■■□□ 2.1
PLOD3-214ENST00000481461 NEXMIFQ5QGS0 1516 aa28.19■■■□□ 2.1
PLOD3-214ENST00000481461 XRN1Q8IZH2 1706 aaKnown RBP28.19■■■□□ 2.1
PLOD3-214ENST00000481461 HFM1A2PYH4 1435 aa28.18■■■□□ 2.1
PLOD3-214ENST00000481461 COL16A1Q07092 1604 aaPredicted RBP28.18■■■□□ 2.1
PLOD3-214ENST00000481461 POTEAQ6S8J7 498 aa28.17■■■□□ 2.1
PLOD3-214ENST00000481461 SLC4A1APQ9BWU0 796 aaKnown RBP28.17■■■□□ 2.1
PLOD3-214ENST00000481461 BRINP3Q76B58 766 aa28.12■■■□□ 2.09
PLOD3-214ENST00000481461 AHDC1Q5TGY3 1603 aaPredicted RBP28.1■■■□□ 2.09
PLOD3-214ENST00000481461 FOXD1Q16676 465 aa28.09■■■□□ 2.09
PLOD3-214ENST00000481461 DCCP43146 1447 aa28.09■■■□□ 2.09
PLOD3-214ENST00000481461 MEX3CQ5U5Q3 659 aaKnown RBP28.08■■■□□ 2.09
PLOD3-214ENST00000481461 VGFO15240 615 aaPredicted RBP28.07■■■□□ 2.08
PLOD3-214ENST00000481461 LRP6O75581 1613 aa28.05■■■□□ 2.08
PLOD3-214ENST00000481461 MST1RQ04912 1400 aa28.05■■■□□ 2.08
PLOD3-214ENST00000481461 SPATA31A6Q5VVP1 1343 aa28.05■■■□□ 2.08
PLOD3-214ENST00000481461 ASXL1Q8IXJ9 1541 aa28.04■■■□□ 2.08
PLOD3-214ENST00000481461 NALCNQ8IZF0 1738 aa28.04■■■□□ 2.08
PLOD3-214ENST00000481461 ADGRL3Q9HAR2 1447 aa28.03■■■□□ 2.08
PLOD3-214ENST00000481461 SHPRHQ149N8 1683 aa28.03■■■□□ 2.08
PLOD3-214ENST00000481461 NUTM2BA6NNL0 878 aaPredicted RBP28.01■■■□□ 2.07
PLOD3-214ENST00000481461 NUTM2EB1AL46 878 aaPredicted RBP28.01■■■□□ 2.07
PLOD3-214ENST00000481461 NUTM2AQ8IVF1 878 aaPredicted RBP28.01■■■□□ 2.07
PLOD3-214ENST00000481461 RPGRIP1LQ68CZ1 1315 aa28■■■□□ 2.07
PLOD3-214ENST00000481461 PPLO60437 1756 aa28■■■□□ 2.07
PLOD3-214ENST00000481461 SETD1AO15047 1707 aaKnown RBP28■■■□□ 2.07
PLOD3-214ENST00000481461 DDX17Q92841 729 aaKnown RBP27.99■■■□□ 2.07
PLOD3-214ENST00000481461 NHSL1Q5SYE7 1610 aa27.96■■■□□ 2.07
PLOD3-214ENST00000481461 ROBO2Q9HCK4 1378 aa27.96■■■□□ 2.07
PLOD3-214ENST00000481461 RGL3Q3MIN7 710 aa27.95■■■□□ 2.06
PLOD3-214ENST00000481461 MPHOSPH9Q99550 1183 aa27.94■■■□□ 2.06
PLOD3-214ENST00000481461 CCDC144AA2RUR9 1427 aa27.93■■■□□ 2.06
PLOD3-214ENST00000481461 PTCH1Q13635 1447 aa27.93■■■□□ 2.06
PLOD3-214ENST00000481461 ZNF772Q68DY9 489 aaPredicted RBP27.92■■■□□ 2.06
PLOD3-214ENST00000481461 SETD5Q9C0A6 1442 aa27.92■■■□□ 2.06
PLOD3-214ENST00000481461 LRRC59Q96AG4 307 aaKnown RBP27.91■■■□□ 2.06
PLOD3-214ENST00000481461 C1orf167Q5SNV9 1468 aa27.9■■■□□ 2.06
PLOD3-214ENST00000481461 ADGRF5Q8IZF2 1346 aa27.89■■■□□ 2.05
PLOD3-214ENST00000481461 ORAI2Q96SN7 254 aa27.87■■■□□ 2.05
PLOD3-214ENST00000481461 STK26Q9P289 416 aa27.85■■■□□ 2.05
PLOD3-214ENST00000481461 PNPLA6Q8IY17 1366 aa27.84■■■□□ 2.05
PLOD3-214ENST00000481461 SPATA31E1Q6ZUB1 1445 aa27.84■■■□□ 2.05
PLOD3-214ENST00000481461 AFF2P51816 1311 aa27.82■■■□□ 2.04
PLOD3-214ENST00000481461 PRAG1Q86YV5 1406 aa27.82■■■□□ 2.04
PLOD3-214ENST00000481461 C8orf37Q96NL8 207 aa27.81■■■□□ 2.04
PLOD3-214ENST00000481461 IFT172Q9UG01 1749 aa27.81■■■□□ 2.04
PLOD3-214ENST00000481461 ANKRD30BQ9BXX2 1392 aa27.8■■■□□ 2.04
PLOD3-214ENST00000481461 RXRBP28702 533 aa27.79■■■□□ 2.04
PLOD3-214ENST00000481461 TMEM132EQ6IEE7 984 aa27.79■■■□□ 2.04
PLOD3-214ENST00000481461 ADAMTS2O95450 1211 aa27.77■■■□□ 2.04
PLOD3-214ENST00000481461 WAPLQ7Z5K2 1190 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms