RNA–Protein interactions for RNA: ENST00000481453.5

MRPL28-209, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 2

Gene MRPL28, Length 2,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-209ENST00000481453 NOS1P29475 1434 aa25.29■■□□□ 1.64
MRPL28-209ENST00000481453 CCDC184Q52MB2 194 aa25.29■■□□□ 1.64
MRPL28-209ENST00000481453 ARHGAP31Q2M1Z3 1444 aa25.27■■□□□ 1.64
MRPL28-209ENST00000481453 SYNMO15061 1565 aa25.27■■□□□ 1.64
MRPL28-209ENST00000481453 NRXN1Q9ULB1 1477 aa25.27■■□□□ 1.64
MRPL28-209ENST00000481453 PIK3C2BO00750 1634 aa25.26■■□□□ 1.63
MRPL28-209ENST00000481453 DISP3Q9P2K9 1392 aa25.26■■□□□ 1.63
MRPL28-209ENST00000481453 REREQ9P2R6 1566 aa25.25■■□□□ 1.63
MRPL28-209ENST00000481453 SCAF11Q99590 1463 aaKnown RBP25.24■■□□□ 1.63
MRPL28-209ENST00000481453 ADGRF5Q8IZF2 1346 aa25.23■■□□□ 1.63
MRPL28-209ENST00000481453 PPLO60437 1756 aa25.23■■□□□ 1.63
MRPL28-209ENST00000481453 AGLP35573 1532 aa25.19■■□□□ 1.62
MRPL28-209ENST00000481453 HNRNPUQ00839 825 aaKnown RBP eCLIP25.17■■□□□ 1.62
MRPL28-209ENST00000481453 CFAP70Q5T0N1 1121 aa25.16■■□□□ 1.62
MRPL28-209ENST00000481453 PREX1Q8TCU6 1659 aa25.16■■□□□ 1.62
MRPL28-209ENST00000481453 CHGAP10645 457 aaKnown RBP25.15■■□□□ 1.62
MRPL28-209ENST00000481453 TMF1P82094 1093 aa25.15■■□□□ 1.62
MRPL28-209ENST00000481453 MRS2Q9HD23 443 aa25.15■■□□□ 1.62
MRPL28-209ENST00000481453 PIK3C2GO75747 1445 aa25.13■■□□□ 1.61
MRPL28-209ENST00000481453 ARHGEF40Q8TER5 1519 aa25.13■■□□□ 1.61
MRPL28-209ENST00000481453 SETBP1Q9Y6X0 1596 aa25.11■■□□□ 1.61
MRPL28-209ENST00000481453 RPGRIP1LQ68CZ1 1315 aa25.11■■□□□ 1.61
MRPL28-209ENST00000481453 NEXMIFQ5QGS0 1516 aa25.1■■□□□ 1.61
MRPL28-209ENST00000481453 PER1O15534 1290 aaPredicted RBP25.09■■□□□ 1.61
MRPL28-209ENST00000481453 EIF3AQ14152 1382 aaKnown RBP25.09■■□□□ 1.61
MRPL28-209ENST00000481453 CNGB1Q14028 1251 aaPredicted RBP25.09■■□□□ 1.61
MRPL28-209ENST00000481453 MYO3AQ8NEV4 1616 aa25.07■■□□□ 1.6
MRPL28-209ENST00000481453 IDI1Q13907 227 aa25.07■■□□□ 1.6
MRPL28-209ENST00000481453 KTN1Q86UP2 1357 aaKnown RBP25.06■■□□□ 1.6
MRPL28-209ENST00000481453 ADGRB1O14514 1584 aa25.06■■□□□ 1.6
MRPL28-209ENST00000481453 TMEM131LA2VDJ0 1609 aa25.05■■□□□ 1.6
MRPL28-209ENST00000481453 CLTCQ00610 1675 aaKnown RBP25.05■■□□□ 1.6
MRPL28-209ENST00000481453 MYO5BQ9ULV0 1848 aa25.05■■□□□ 1.6
MRPL28-209ENST00000481453 ERVK-7P63135 1459 aa25.04■■□□□ 1.6
MRPL28-209ENST00000481453 FAM9BQ8IZU0 186 aa25.04■■□□□ 1.6
MRPL28-209ENST00000481453 SLC52A1Q9NWF4 448 aa25.04■■□□□ 1.6
MRPL28-209ENST00000481453 C14orf93Q9H972 538 aaKnown RBP25.04■■□□□ 1.6
MRPL28-209ENST00000481453 PPP6R1Q9UPN7 881 aa25.03■■□□□ 1.6
MRPL28-209ENST00000481453 MYOM1P52179 1685 aa25.02■■□□□ 1.6
MRPL28-209ENST00000481453 PARD3Q8TEW0 1356 aa25.02■■□□□ 1.6
MRPL28-209ENST00000481453 RALBP1Q15311 655 aa25.02■■□□□ 1.6
MRPL28-209ENST00000481453 PANK3Q9H999 370 aa25.02■■□□□ 1.6
MRPL28-209ENST00000481453 FBXO31Q5XUX0 539 aaPredicted RBP25.01■■□□□ 1.59
MRPL28-209ENST00000481453 MYBBP1AQ9BQG0 1328 aaKnown RBP25■■□□□ 1.59
MRPL28-209ENST00000481453 KDM5AP29375 1690 aaKnown RBP24.99■■□□□ 1.59
MRPL28-209ENST00000481453 ZFYVE9O95405 1425 aa24.98■■□□□ 1.59
MRPL28-209ENST00000481453 CDCA8Q53HL2 280 aa24.97■■□□□ 1.59
MRPL28-209ENST00000481453 BRD4O60885 1362 aaPredicted RBP24.96■■□□□ 1.59
MRPL28-209ENST00000481453 SBNO2Q9Y2G9 1366 aa24.96■■□□□ 1.59
MRPL28-209ENST00000481453 SPATA31D1Q6ZQQ2 1576 aa24.96■■□□□ 1.59
MRPL28-209ENST00000481453 VGFO15240 615 aaPredicted RBP24.96■■□□□ 1.59
MRPL28-209ENST00000481453 NUTM2DQ5VT03 806 aaPredicted RBP24.94■■□□□ 1.58
MRPL28-209ENST00000481453 PNISRQ8TF01 805 aaKnown RBP24.93■■□□□ 1.58
MRPL28-209ENST00000481453 QRICH2Q9H0J4 1663 aa24.92■■□□□ 1.58
MRPL28-209ENST00000481453 TMEM132EQ6IEE7 984 aa24.92■■□□□ 1.58
MRPL28-209ENST00000481453 MLECQ14165 292 aa24.91■■□□□ 1.58
MRPL28-209ENST00000481453 CENPJQ9HC77 1338 aaPredicted RBP24.91■■□□□ 1.58
MRPL28-209ENST00000481453 TMC1Q8TDI8 760 aa24.9■■□□□ 1.58
MRPL28-209ENST00000481453 ASXL1Q8IXJ9 1541 aa24.9■■□□□ 1.58
MRPL28-209ENST00000481453 SLC24A1O60721 1099 aa24.9■■□□□ 1.58
MRPL28-209ENST00000481453 TRAK1Q9UPV9 953 aa24.9■■□□□ 1.58
MRPL28-209ENST00000481453 ZBED9Q6R2W3 1325 aa24.9■■□□□ 1.58
MRPL28-209ENST00000481453 ARHGEF28Q8N1W1 1705 aaKnown RBP24.89■■□□□ 1.57
MRPL28-209ENST00000481453 IRX6P78412 446 aaPredicted RBP24.89■■□□□ 1.57
MRPL28-209ENST00000481453 LRPPRCP42704 1394 aaKnown RBP24.88■■□□□ 1.57
MRPL28-209ENST00000481453 CC2D1BQ5T0F9 858 aaKnown RBP24.88■■□□□ 1.57
MRPL28-209ENST00000481453 NLRP13Q86W25 1043 aa24.88■■□□□ 1.57
MRPL28-209ENST00000481453 RBM19Q9Y4C8 960 aaKnown RBP24.85■■□□□ 1.57
MRPL28-209ENST00000481453 A2ML1A8K2U0 1454 aa24.84■■□□□ 1.57
MRPL28-209ENST00000481453 AMER1Q5JTC6 1135 aaPredicted RBP24.84■■□□□ 1.57
MRPL28-209ENST00000481453 KNSTRNQ9Y448 316 aa24.81■■□□□ 1.56
MRPL28-209ENST00000481453 ZMYM3Q14202 1370 aa24.81■■□□□ 1.56
MRPL28-209ENST00000481453 ERICH6BQ5W0A0 696 aa24.81■■□□□ 1.56
MRPL28-209ENST00000481453 NPC1L1Q9UHC9 1359 aa24.79■■□□□ 1.56
MRPL28-209ENST00000481453 ALKQ9UM73 1620 aa24.78■■□□□ 1.56
MRPL28-209ENST00000481453 TULP4Q9NRJ4 1543 aa24.77■■□□□ 1.56
MRPL28-209ENST00000481453 ANP32EQ9BTT0 268 aa24.76■■□□□ 1.55
MRPL28-209ENST00000481453 STAG3Q9UJ98 1225 aa24.76■■□□□ 1.55
MRPL28-209ENST00000481453 PTPRMP28827 1452 aa24.74■■□□□ 1.55
MRPL28-209ENST00000481453 RIMS2Q9UQ26 1411 aa24.74■■□□□ 1.55
MRPL28-209ENST00000481453 CARD14Q9BXL6 1004 aa24.74■■□□□ 1.55
MRPL28-209ENST00000481453 SENP3Q9H4L4 574 aaPredicted RBP24.74■■□□□ 1.55
MRPL28-209ENST00000481453 ESF1Q9H501 851 aaKnown RBP24.73■■□□□ 1.55
MRPL28-209ENST00000481453 PPP4R2Q9NY27 417 aa24.73■■□□□ 1.55
MRPL28-209ENST00000481453 SETD1AO15047 1707 aaKnown RBP24.72■■□□□ 1.55
MRPL28-209ENST00000481453 YTHDC2Q9H6S0 1430 aaKnown RBP24.72■■□□□ 1.55
MRPL28-209ENST00000481453 PPP2R1AP30153 589 aa24.7■■□□□ 1.55
MRPL28-209ENST00000481453 TNRQ92752 1358 aa24.68■■□□□ 1.54
MRPL28-209ENST00000481453 PUS7Q96PZ0 661 aaKnown RBP24.68■■□□□ 1.54
MRPL28-209ENST00000481453 STK26Q9P289 416 aa24.68■■□□□ 1.54
MRPL28-209ENST00000481453 NRXN3Q9Y4C0 1643 aa24.67■■□□□ 1.54
MRPL28-209ENST00000481453 INSRP06213 1382 aa24.67■■□□□ 1.54
MRPL28-209ENST00000481453 EVC2Q86UK5 1308 aa24.66■■□□□ 1.54
MRPL28-209ENST00000481453 SMG6Q86US8 1419 aaKnown RBP24.66■■□□□ 1.54
MRPL28-209ENST00000481453 SLC12A5Q9H2X9 1139 aa24.65■■□□□ 1.54
MRPL28-209ENST00000481453 BLMP54132 1417 aaPredicted RBP24.65■■□□□ 1.54
MRPL28-209ENST00000481453 SENP3-EIF4A1A0A087X0R7 540 aa24.65■■□□□ 1.54
MRPL28-209ENST00000481453 UBR1Q8IWV7 1749 aa24.64■■□□□ 1.53
MRPL28-209ENST00000481453 NSD3Q9BZ95 1437 aa24.63■■□□□ 1.53
MRPL28-209ENST00000481453 USP32Q8NFA0 1604 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms