RNA–Protein interactions for RNA: ENST00000481205.5

RTN1-206, Transcript of reticulon 1, humanhuman

TSL 2

Gene RTN1, Length 3,169 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-206ENST00000481205 WDR7Q9Y4E6 1490 aa7.49□□□□□ -1.21
RTN1-206ENST00000481205 ZNF326Q5BKZ1 582 aaKnown RBP7.49□□□□□ -1.21
RTN1-206ENST00000481205 CADPS2Q86UW7 1296 aa7.49□□□□□ -1.21
RTN1-206ENST00000481205 TEX14Q8IWB6 1497 aa7.49□□□□□ -1.21
RTN1-206ENST00000481205 ABCC1P33527 1531 aa7.49□□□□□ -1.21
RTN1-206ENST00000481205 INO80Q9ULG1 1556 aaPredicted RBP7.48□□□□□ -1.21
RTN1-206ENST00000481205 C11orf95C9JLR9 678 aaPredicted RBP7.48□□□□□ -1.21
RTN1-206ENST00000481205 AFAP1Q8N556 730 aa7.48□□□□□ -1.21
RTN1-206ENST00000481205 CNGB1Q14028 1251 aaPredicted RBP7.48□□□□□ -1.21
RTN1-206ENST00000481205 FAM9BQ8IZU0 186 aa7.48□□□□□ -1.21
RTN1-206ENST00000481205 WASHC2AQ641Q2 1341 aa7.48□□□□□ -1.21
RTN1-206ENST00000481205 KIAA1107Q9UPP5 1409 aa7.48□□□□□ -1.21
RTN1-206ENST00000481205 TRAPPC8Q9Y2L5 1435 aa7.47□□□□□ -1.21
RTN1-206ENST00000481205 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.47□□□□□ -1.21
RTN1-206ENST00000481205 ZNF428Q96B54 188 aa7.47□□□□□ -1.21
RTN1-206ENST00000481205 POLR3GLQ9BT43 218 aa7.47□□□□□ -1.21
RTN1-206ENST00000481205 KDM5CP41229 1560 aa7.47□□□□□ -1.21
RTN1-206ENST00000481205 PLCH2O75038 1416 aa7.47□□□□□ -1.21
RTN1-206ENST00000481205 MRS2Q9HD23 443 aa7.47□□□□□ -1.21
RTN1-206ENST00000481205 DEPDC5O75140 1603 aa7.46□□□□□ -1.21
RTN1-206ENST00000481205 PLEKHH2Q8IVE3 1493 aa7.46□□□□□ -1.21
RTN1-206ENST00000481205 KDM5DQ9BY66 1539 aa7.46□□□□□ -1.22
RTN1-206ENST00000481205 RICTORQ6R327 1708 aa7.46□□□□□ -1.22
RTN1-206ENST00000481205 RSPH4AQ5TD94 716 aa7.46□□□□□ -1.22
RTN1-206ENST00000481205 NECTIN2Q92692 538 aa7.46□□□□□ -1.22
RTN1-206ENST00000481205 FRMPD1Q5SYB0 1578 aa7.45□□□□□ -1.22
RTN1-206ENST00000481205 EFCAB2Q5VUJ9 269 aa7.45□□□□□ -1.22
RTN1-206ENST00000481205 NAP1L5Q96NT1 182 aaPredicted RBP7.45□□□□□ -1.22
RTN1-206ENST00000481205 SEMA3EO15041 775 aa7.45□□□□□ -1.22
RTN1-206ENST00000481205 ZMYM4Q5VZL5 1548 aa7.44□□□□□ -1.22
RTN1-206ENST00000481205 MAGI2Q86UL8 1455 aa7.44□□□□□ -1.22
RTN1-206ENST00000481205 EIF2AK4Q9P2K8 1649 aaKnown RBP7.44□□□□□ -1.22
RTN1-206ENST00000481205 UNC13BO14795 1591 aa7.44□□□□□ -1.22
RTN1-206ENST00000481205 REREQ9P2R6 1566 aa7.44□□□□□ -1.22
RTN1-206ENST00000481205 ASXL2Q76L83 1435 aa7.43□□□□□ -1.22
RTN1-206ENST00000481205 FAM135AQ9P2D6 1515 aa7.43□□□□□ -1.22
RTN1-206ENST00000481205 HS6ST3Q8IZP7 471 aa7.43□□□□□ -1.22
RTN1-206ENST00000481205 CNTLNQ9NXG0 1405 aa7.43□□□□□ -1.22
RTN1-206ENST00000481205 RGL3Q3MIN7 710 aa7.43□□□□□ -1.22
RTN1-206ENST00000481205 CCDC184Q52MB2 194 aa7.43□□□□□ -1.22
RTN1-206ENST00000481205 PRKRIP1Q9H875 184 aaPredicted RBP7.43□□□□□ -1.22
RTN1-206ENST00000481205 CYB5RLQ6IPT4 315 aa7.42□□□□□ -1.22
RTN1-206ENST00000481205 PLA2R1Q13018 1463 aa7.42□□□□□ -1.22
RTN1-206ENST00000481205 CCDC7Q96M83 1385 aa7.42□□□□□ -1.22
RTN1-206ENST00000481205 RNF17Q9BXT8 1623 aaKnown RBP7.41□□□□□ -1.22
RTN1-206ENST00000481205 DCAF11Q8TEB1 546 aa7.41□□□□□ -1.22
RTN1-206ENST00000481205 VWDEQ8N2E2 1590 aa7.41□□□□□ -1.22
RTN1-206ENST00000481205 SPAG9O60271 1321 aaKnown RBP7.41□□□□□ -1.22
RTN1-206ENST00000481205 ZFYVE16Q7Z3T8 1539 aa7.41□□□□□ -1.22
RTN1-206ENST00000481205 ZC3H15Q8WU90 426 aaKnown RBP7.41□□□□□ -1.22
RTN1-206ENST00000481205 PPP4R2Q9NY27 417 aa7.41□□□□□ -1.22
RTN1-206ENST00000481205 FANCAO15360 1455 aa7.4□□□□□ -1.22
RTN1-206ENST00000481205 FANCIQ9NVI1 1328 aa7.4□□□□□ -1.22
RTN1-206ENST00000481205 SPATA31E1Q6ZUB1 1445 aa7.4□□□□□ -1.22
RTN1-206ENST00000481205 APBB1O00213 710 aa7.4□□□□□ -1.22
RTN1-206ENST00000481205 NEO1Q92859 1461 aa7.4□□□□□ -1.22
RTN1-206ENST00000481205 KIDINS220Q9ULH0 1771 aa7.39□□□□□ -1.23
RTN1-206ENST00000481205 NAP1L2Q9ULW6 460 aaPredicted RBP7.39□□□□□ -1.23
RTN1-206ENST00000481205 KIF7Q2M1P5 1343 aa7.39□□□□□ -1.23
RTN1-206ENST00000481205 SCAPERQ9BY12 1400 aa7.39□□□□□ -1.23
RTN1-206ENST00000481205 MROH1Q8NDA8 1641 aa7.39□□□□□ -1.23
RTN1-206ENST00000481205 STK24Q9Y6E0 443 aa7.38□□□□□ -1.23
RTN1-206ENST00000481205 B4GALNT3Q6L9W6 998 aa7.38□□□□□ -1.23
RTN1-206ENST00000481205 ADGRL1O94910 1474 aa7.38□□□□□ -1.23
RTN1-206ENST00000481205 NBPF1Q3BBV0 1214 aa7.38□□□□□ -1.23
RTN1-206ENST00000481205 USP47Q96K76 1375 aa7.38□□□□□ -1.23
RTN1-206ENST00000481205 RTEL1-TNFRSF6BF6WH68 1400 aa7.38□□□□□ -1.23
RTN1-206ENST00000481205 DUOX2Q9NRD8 1548 aa7.38□□□□□ -1.23
RTN1-206ENST00000481205 IQGAP3Q86VI3 1631 aa7.38□□□□□ -1.23
RTN1-206ENST00000481205 ZBED9Q6R2W3 1325 aa7.37□□□□□ -1.23
RTN1-206ENST00000481205 CCDC144AA2RUR9 1427 aa7.37□□□□□ -1.23
RTN1-206ENST00000481205 CAPN15O75808 1086 aa7.37□□□□□ -1.23
RTN1-206ENST00000481205 KIF3BO15066 747 aa7.36□□□□□ -1.23
RTN1-206ENST00000481205 CARD11Q9BXL7 1154 aa7.36□□□□□ -1.23
RTN1-206ENST00000481205 NEURL4Q96JN8 1562 aa7.36□□□□□ -1.23
RTN1-206ENST00000481205 ERBINQ96RT1 1412 aa7.36□□□□□ -1.23
RTN1-206ENST00000481205 ZNF692Q9BU19 519 aaPredicted RBP7.36□□□□□ -1.23
RTN1-206ENST00000481205 SENP3-EIF4A1A0A087X0R7 540 aa7.36□□□□□ -1.23
RTN1-206ENST00000481205 HECW2Q9P2P5 1572 aa7.35□□□□□ -1.23
RTN1-206ENST00000481205 ST20-MTHFSA0A0A6YYL1 179 aa7.35□□□□□ -1.23
RTN1-206ENST00000481205 MKRN3Q13064 507 aaKnown RBP7.35□□□□□ -1.23
RTN1-206ENST00000481205 ABCA6Q8N139 1617 aa7.35□□□□□ -1.23
RTN1-206ENST00000481205 ATP7AQ04656 1500 aa7.35□□□□□ -1.23
RTN1-206ENST00000481205 RAPGEF3O95398 923 aa7.35□□□□□ -1.23
RTN1-206ENST00000481205 TMC1Q8TDI8 760 aa7.35□□□□□ -1.23
RTN1-206ENST00000481205 UHRF1BP1Q6BDS2 1440 aa7.35□□□□□ -1.23
RTN1-206ENST00000481205 PRDM15P57071 1507 aaPredicted RBP7.35□□□□□ -1.23
RTN1-206ENST00000481205 ZC3H13Q5T200 1668 aaKnown RBP7.35□□□□□ -1.23
RTN1-206ENST00000481205 A2MP01023 1474 aa7.35□□□□□ -1.23
RTN1-206ENST00000481205 CD109Q6YHK3 1445 aa7.34□□□□□ -1.23
RTN1-206ENST00000481205 MLH3Q9UHC1 1453 aa7.34□□□□□ -1.23
RTN1-206ENST00000481205 SIGLEC1Q9BZZ2 1709 aa7.34□□□□□ -1.23
RTN1-206ENST00000481205 RALGAPBQ86X10 1494 aa7.34□□□□□ -1.23
RTN1-206ENST00000481205 CHMP4BQ9H444 224 aaKnown RBP7.34□□□□□ -1.23
RTN1-206ENST00000481205 LMTK2Q8IWU2 1503 aa7.34□□□□□ -1.24
RTN1-206ENST00000481205 RTL5Q5HYW3 569 aaPredicted RBP7.33□□□□□ -1.24
RTN1-206ENST00000481205 DIP2CQ9Y2E4 1556 aa7.33□□□□□ -1.24
RTN1-206ENST00000481205 PRAG1Q86YV5 1406 aa7.33□□□□□ -1.24
RTN1-206ENST00000481205 ROCK2O75116 1388 aaKnown RBP7.33□□□□□ -1.24
RTN1-206ENST00000481205 POGZQ7Z3K3 1410 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms