RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 CTR9Q6PD62 1173 aa12.91□□□□□ -0.34
PRPF4B-206ENST00000481109 MAP3K1Q13233 1512 aa12.9□□□□□ -0.34
PRPF4B-206ENST00000481109 GAS2L3Q86XJ1 694 aa12.9□□□□□ -0.34
PRPF4B-206ENST00000481109 CREBRFQ8IUR6 639 aa12.9□□□□□ -0.34
PRPF4B-206ENST00000481109 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.9□□□□□ -0.34
PRPF4B-206ENST00000481109 CHMP5Q9NZZ3 219 aa12.9□□□□□ -0.34
PRPF4B-206ENST00000481109 HSP90AB1P08238 724 aaKnown RBP12.89□□□□□ -0.35
PRPF4B-206ENST00000481109 XPCQ01831 940 aaPredicted RBP12.89□□□□□ -0.35
PRPF4B-206ENST00000481109 PDLIM2Q96JY6 352 aa12.89□□□□□ -0.35
PRPF4B-206ENST00000481109 TONSLQ96HA7 1378 aa12.89□□□□□ -0.35
PRPF4B-206ENST00000481109 BRPF1P55201 1214 aaPredicted RBP12.88□□□□□ -0.35
PRPF4B-206ENST00000481109 SATB1Q01826 763 aa12.88□□□□□ -0.35
PRPF4B-206ENST00000481109 CHMP4CQ96CF2 233 aa12.88□□□□□ -0.35
PRPF4B-206ENST00000481109 NCAPGQ9BPX3 1015 aa12.88□□□□□ -0.35
PRPF4B-206ENST00000481109 OGFRQ9NZT2 677 aa12.88□□□□□ -0.35
PRPF4B-206ENST00000481109 CEP83Q9Y592 693 aa12.88□□□□□ -0.35
PRPF4B-206ENST00000481109 LOC102724159A0A0B4J2E5 919 aa12.88□□□□□ -0.35
PRPF4B-206ENST00000481109 PWP2Q15269 919 aaKnown RBP12.88□□□□□ -0.35
PRPF4B-206ENST00000481109 SETQ01105 290 aaPredicted RBP12.87□□□□□ -0.35
PRPF4B-206ENST00000481109 NLRP1Q9C000 1473 aa12.87□□□□□ -0.35
PRPF4B-206ENST00000481109 SLFN14P0C7P3 912 aa12.87□□□□□ -0.35
PRPF4B-206ENST00000481109 PRR29P0C7W0 189 aa12.87□□□□□ -0.35
PRPF4B-206ENST00000481109 NCOA1Q15788 1441 aa12.86□□□□□ -0.35
PRPF4B-206ENST00000481109 PANK3Q9H999 370 aa12.86□□□□□ -0.35
PRPF4B-206ENST00000481109 KIF27Q86VH2 1401 aa12.86□□□□□ -0.35
PRPF4B-206ENST00000481109 PDE3BQ13370 1112 aa12.86□□□□□ -0.35
PRPF4B-206ENST00000481109 PDCL2Q8N4E4 241 aa12.86□□□□□ -0.35
PRPF4B-206ENST00000481109 SIRT1Q96EB6 747 aa12.86□□□□□ -0.35
PRPF4B-206ENST00000481109 SMC4Q9NTJ3 1288 aa12.86□□□□□ -0.35
PRPF4B-206ENST00000481109 FEZ2Q9UHY8 353 aaPredicted RBP12.86□□□□□ -0.35
PRPF4B-206ENST00000481109 PRDM2Q13029 1718 aa12.86□□□□□ -0.35
PRPF4B-206ENST00000481109 ZNF592Q92610 1267 aa12.85□□□□□ -0.35
PRPF4B-206ENST00000481109 BRMS1Q9HCU9 246 aa12.85□□□□□ -0.35
PRPF4B-206ENST00000481109 HMGXB3Q12766 1538 aa12.85□□□□□ -0.35
PRPF4B-206ENST00000481109 CFTRP13569 1480 aa12.85□□□□□ -0.35
PRPF4B-206ENST00000481109 RAI14Q9P0K7 980 aa12.85□□□□□ -0.35
PRPF4B-206ENST00000481109 RAD50Q92878 1312 aa12.84□□□□□ -0.35
PRPF4B-206ENST00000481109 CFAP65Q6ZU64 1925 aaKnown RBP12.84□□□□□ -0.35
PRPF4B-206ENST00000481109 CCDC172P0C7W6 258 aa12.84□□□□□ -0.35
PRPF4B-206ENST00000481109 NOP2P46087 812 aaKnown RBP12.83□□□□□ -0.36
PRPF4B-206ENST00000481109 CCDC7Q96M83 1385 aa12.83□□□□□ -0.36
PRPF4B-206ENST00000481109 KDM5BQ9UGL1 1544 aa12.83□□□□□ -0.36
PRPF4B-206ENST00000481109 CT47A1Q5JQC4 288 aaPredicted RBP12.82□□□□□ -0.36
PRPF4B-206ENST00000481109 SKAP1Q86WV1 359 aa12.82□□□□□ -0.36
PRPF4B-206ENST00000481109 ANKRD7Q92527 254 aa12.82□□□□□ -0.36
PRPF4B-206ENST00000481109 TBC1D2Q9BYX2 928 aa12.82□□□□□ -0.36
PRPF4B-206ENST00000481109 NBPF11Q86T75 865 aa12.81□□□□□ -0.36
PRPF4B-206ENST00000481109 UPF2Q9HAU5 1272 aaKnown RBP12.81□□□□□ -0.36
PRPF4B-206ENST00000481109 POLR1AO95602 1720 aaPredicted RBP12.81□□□□□ -0.36
PRPF4B-206ENST00000481109 KIAA1107Q9UPP5 1409 aa12.81□□□□□ -0.36
PRPF4B-206ENST00000481109 GTF2A1P52655 376 aaPredicted RBP12.81□□□□□ -0.36
PRPF4B-206ENST00000481109 CCDC39Q9UFE4 941 aa12.81□□□□□ -0.36
PRPF4B-206ENST00000481109 SH3BP1Q9Y3L3 701 aa12.81□□□□□ -0.36
PRPF4B-206ENST00000481109 SPDYE4A6NLX3 237 aa12.8□□□□□ -0.36
PRPF4B-206ENST00000481109 TERF2Q15554 542 aa12.8□□□□□ -0.36
PRPF4B-206ENST00000481109 ZBTB9Q96C00 473 aa12.8□□□□□ -0.36
PRPF4B-206ENST00000481109 ARHGAP35Q9NRY4 1499 aa12.8□□□□□ -0.36
PRPF4B-206ENST00000481109 TNNT3P45378 269 aaPredicted RBP12.8□□□□□ -0.36
PRPF4B-206ENST00000481109 MAP2K1Q02750 393 aaPredicted RBP12.8□□□□□ -0.36
PRPF4B-206ENST00000481109 KIF16BQ96L93 1317 aa12.8□□□□□ -0.36
PRPF4B-206ENST00000481109 LRPPRCP42704 1394 aaKnown RBP12.79□□□□□ -0.36
PRPF4B-206ENST00000481109 ZMYM3Q14202 1370 aa12.79□□□□□ -0.36
PRPF4B-206ENST00000481109 IGSF3O75054 1194 aa12.79□□□□□ -0.36
PRPF4B-206ENST00000481109 HSPA5P11021 654 aaKnown RBP12.79□□□□□ -0.36
PRPF4B-206ENST00000481109 TPRNQ4KMQ1 711 aa12.79□□□□□ -0.36
PRPF4B-206ENST00000481109 IGF1RP08069 1367 aa12.79□□□□□ -0.36
PRPF4B-206ENST00000481109 KIF1CO43896 1103 aaKnown RBP12.79□□□□□ -0.36
PRPF4B-206ENST00000481109 ICE2Q659A1 982 aa12.78□□□□□ -0.36
PRPF4B-206ENST00000481109 TTC36A6NLP5 189 aa12.78□□□□□ -0.36
PRPF4B-206ENST00000481109 IRF6O14896 467 aa12.78□□□□□ -0.36
PRPF4B-206ENST00000481109 CRBNQ96SW2 442 aa12.78□□□□□ -0.36
PRPF4B-206ENST00000481109 GUCY2CP25092 1073 aa12.77□□□□□ -0.36
PRPF4B-206ENST00000481109 SLC26A8Q96RN1 970 aa12.77□□□□□ -0.36
PRPF4B-206ENST00000481109 BCL2L12Q9HB09 334 aa12.77□□□□□ -0.36
PRPF4B-206ENST00000481109 DONSONQ9NYP3 566 aa12.77□□□□□ -0.36
PRPF4B-206ENST00000481109 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.77□□□□□ -0.37
PRPF4B-206ENST00000481109 KIAA2012Q0VF49 1180 aa12.77□□□□□ -0.37
PRPF4B-206ENST00000481109 NBPF9Q3BBW0 867 aa12.77□□□□□ -0.37
PRPF4B-206ENST00000481109 PNISRQ8TF01 805 aaKnown RBP12.77□□□□□ -0.37
PRPF4B-206ENST00000481109 GBP4Q96PP9 640 aa12.77□□□□□ -0.37
PRPF4B-206ENST00000481109 ARHGAP31Q2M1Z3 1444 aa12.76□□□□□ -0.37
PRPF4B-206ENST00000481109 DHX16O60231 1041 aaKnown RBP12.76□□□□□ -0.37
PRPF4B-206ENST00000481109 EIF4G2P78344 907 aaKnown RBP eCLIP12.76□□□□□ -0.37
PRPF4B-206ENST00000481109 TBC1D32Q96NH3 1257 aa12.76□□□□□ -0.37
PRPF4B-206ENST00000481109 SPINK5Q9NQ38 1064 aaPredicted RBP12.76□□□□□ -0.37
PRPF4B-206ENST00000481109 RBM28Q9NW13 759 aaKnown RBP12.76□□□□□ -0.37
PRPF4B-206ENST00000481109 NCOA3Q9Y6Q9 1424 aa12.76□□□□□ -0.37
PRPF4B-206ENST00000481109 TRHP20396 242 aaPredicted RBP12.76□□□□□ -0.37
PRPF4B-206ENST00000481109 U2AF2P26368 475 aaKnown RBP eCLIP12.76□□□□□ -0.372e-11■■■■■ 34.8
PRPF4B-206ENST00000481109 ZNF445P59923 1031 aa12.76□□□□□ -0.37
PRPF4B-206ENST00000481109 EP400NLQ6ZTU2 488 aa12.76□□□□□ -0.37
PRPF4B-206ENST00000481109 GOLIM4O00461 696 aa12.75□□□□□ -0.37
PRPF4B-206ENST00000481109 PSMD1Q99460 953 aa12.75□□□□□ -0.37
PRPF4B-206ENST00000481109 CIZ1Q9ULV3 898 aaPredicted RBP12.75□□□□□ -0.37
PRPF4B-206ENST00000481109 SYCP1Q15431 976 aa12.74□□□□□ -0.37
PRPF4B-206ENST00000481109 BSDC1Q9NW68 430 aaPredicted RBP12.74□□□□□ -0.37
PRPF4B-206ENST00000481109 MORC2Q9Y6X9 1032 aaPredicted RBP12.74□□□□□ -0.37
PRPF4B-206ENST00000481109 ROCK2O75116 1388 aaKnown RBP12.74□□□□□ -0.37
PRPF4B-206ENST00000481109 SEMA3FQ13275 785 aa12.74□□□□□ -0.37
PRPF4B-206ENST00000481109 PUS7Q96PZ0 661 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms