RNA–Protein interactions for RNA: ENST00000481002.5

SHROOM3-205, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-205ENST00000481002 HDGFP51858 240 aaKnown RBP18.01■□□□□ 0.47
SHROOM3-205ENST00000481002 RGL3Q3MIN7 710 aa18.01■□□□□ 0.47
SHROOM3-205ENST00000481002 ZNF326Q5BKZ1 582 aaKnown RBP18.01■□□□□ 0.47
SHROOM3-205ENST00000481002 PPLO60437 1756 aa18■□□□□ 0.47
SHROOM3-205ENST00000481002 NEXMIFQ5QGS0 1516 aa18■□□□□ 0.47
SHROOM3-205ENST00000481002 TXNDC2Q86VQ3 553 aa18■□□□□ 0.47
SHROOM3-205ENST00000481002 ABCF1Q8NE71 845 aaKnown RBP eCLIP18■□□□□ 0.47
SHROOM3-205ENST00000481002 EID1Q9Y6B2 187 aa18■□□□□ 0.47
SHROOM3-205ENST00000481002 IFT172Q9UG01 1749 aa18■□□□□ 0.47
SHROOM3-205ENST00000481002 CCER1Q8TC90 406 aaPredicted RBP17.99■□□□□ 0.47
SHROOM3-205ENST00000481002 SCAF11Q99590 1463 aaKnown RBP17.99■□□□□ 0.47
SHROOM3-205ENST00000481002 NCKAP5LQ9HCH0 1330 aa17.98■□□□□ 0.47
SHROOM3-205ENST00000481002 MED14O60244 1454 aa17.98■□□□□ 0.47
SHROOM3-205ENST00000481002 NEUROD1Q13562 356 aa17.97■□□□□ 0.47
SHROOM3-205ENST00000481002 VGFO15240 615 aaPredicted RBP17.95■□□□□ 0.46
SHROOM3-205ENST00000481002 NUTM2DQ5VT03 806 aaPredicted RBP17.94■□□□□ 0.46
SHROOM3-205ENST00000481002 STAC3Q96MF2 364 aa17.94■□□□□ 0.46
SHROOM3-205ENST00000481002 DMRT2Q9Y5R5 561 aa17.93■□□□□ 0.46
SHROOM3-205ENST00000481002 IQGAP1P46940 1657 aa17.93■□□□□ 0.46
SHROOM3-205ENST00000481002 PLEKHG1Q9ULL1 1385 aa17.92■□□□□ 0.46
SHROOM3-205ENST00000481002 NPHP4O75161 1426 aaPredicted RBP17.92■□□□□ 0.46
SHROOM3-205ENST00000481002 PPP1R15AO75807 674 aaPredicted RBP17.92■□□□□ 0.46
SHROOM3-205ENST00000481002 DCAF11Q8TEB1 546 aa17.91■□□□□ 0.46
SHROOM3-205ENST00000481002 MYOM2P54296 1465 aa17.9■□□□□ 0.46
SHROOM3-205ENST00000481002 L3MBTL2Q969R5 705 aa17.9■□□□□ 0.46
SHROOM3-205ENST00000481002 ADGRF5Q8IZF2 1346 aa17.89■□□□□ 0.45
SHROOM3-205ENST00000481002 NRXN1Q9ULB1 1477 aa17.88■□□□□ 0.45
SHROOM3-205ENST00000481002 SETBP1Q9Y6X0 1596 aa17.88■□□□□ 0.45
SHROOM3-205ENST00000481002 NRXN3Q9Y4C0 1643 aa17.88■□□□□ 0.45
SHROOM3-205ENST00000481002 KDM2AQ9Y2K7 1162 aa17.88■□□□□ 0.45
SHROOM3-205ENST00000481002 TIMELESSQ9UNS1 1208 aa17.86■□□□□ 0.45
SHROOM3-205ENST00000481002 TBX22Q9Y458 520 aa17.86■□□□□ 0.45
SHROOM3-205ENST00000481002 TONSLQ96HA7 1378 aa17.86■□□□□ 0.45
SHROOM3-205ENST00000481002 ADAMTS13Q76LX8 1427 aa17.86■□□□□ 0.45
SHROOM3-205ENST00000481002 BCANQ96GW7 911 aa17.85■□□□□ 0.45
SHROOM3-205ENST00000481002 DIP2AQ14689 1571 aa17.84■□□□□ 0.45
SHROOM3-205ENST00000481002 PIK3C2GO75747 1445 aa17.84■□□□□ 0.45
SHROOM3-205ENST00000481002 SLC26A8Q96RN1 970 aa17.84■□□□□ 0.45
SHROOM3-205ENST00000481002 SETD1AO15047 1707 aaKnown RBP17.84■□□□□ 0.45
SHROOM3-205ENST00000481002 SENP3Q9H4L4 574 aaPredicted RBP17.83■□□□□ 0.44
SHROOM3-205ENST00000481002 ALKQ9UM73 1620 aa17.83■□□□□ 0.44
SHROOM3-205ENST00000481002 C14orf93Q9H972 538 aaKnown RBP17.81■□□□□ 0.44
SHROOM3-205ENST00000481002 CHD2O14647 1828 aaKnown RBP17.81■□□□□ 0.44
SHROOM3-205ENST00000481002 PRAG1Q86YV5 1406 aa17.81■□□□□ 0.44
SHROOM3-205ENST00000481002 LAMC1P11047 1609 aa17.8■□□□□ 0.44
SHROOM3-205ENST00000481002 KIAA1210Q9ULL0 1709 aa17.79■□□□□ 0.44
SHROOM3-205ENST00000481002 PIK3R4Q99570 1358 aa17.79■□□□□ 0.44
SHROOM3-205ENST00000481002 CFAP70Q5T0N1 1121 aa17.77■□□□□ 0.44
SHROOM3-205ENST00000481002 METP08581 1390 aa17.77■□□□□ 0.43
SHROOM3-205ENST00000481002 STRCP1A6NGW2 1772 aa17.76■□□□□ 0.43
SHROOM3-205ENST00000481002 KCNA6P17658 529 aa17.75■□□□□ 0.43
SHROOM3-205ENST00000481002 NBPF8Q3BBV2 869 aa17.75■□□□□ 0.43
SHROOM3-205ENST00000481002 TRPM1Q7Z4N2 1603 aa17.74■□□□□ 0.43
SHROOM3-205ENST00000481002 ZNF335Q9H4Z2 1342 aaPredicted RBP17.73■□□□□ 0.43
SHROOM3-205ENST00000481002 PTPRUQ92729 1446 aa17.73■□□□□ 0.43
SHROOM3-205ENST00000481002 ASXL1Q8IXJ9 1541 aa17.73■□□□□ 0.43
SHROOM3-205ENST00000481002 NWD1Q149M9 1564 aa17.73■□□□□ 0.43
SHROOM3-205ENST00000481002 ADGRB1O14514 1584 aa17.72■□□□□ 0.43
SHROOM3-205ENST00000481002 TMEM132EQ6IEE7 984 aa17.72■□□□□ 0.43
SHROOM3-205ENST00000481002 XRN1Q8IZH2 1706 aaKnown RBP17.72■□□□□ 0.43
SHROOM3-205ENST00000481002 AMOTL2Q9Y2J4 779 aa17.71■□□□□ 0.43
SHROOM3-205ENST00000481002 LTBP4Q8N2S1 1624 aa17.71■□□□□ 0.43
SHROOM3-205ENST00000481002 NBPF1Q3BBV0 1214 aa17.7■□□□□ 0.42
SHROOM3-205ENST00000481002 LRPPRCP42704 1394 aaKnown RBP17.69■□□□□ 0.42
SHROOM3-205ENST00000481002 YTHDC2Q9H6S0 1430 aaKnown RBP17.69■□□□□ 0.42
SHROOM3-205ENST00000481002 ABCC11Q96J66 1382 aa17.68■□□□□ 0.42
SHROOM3-205ENST00000481002 CPS1P31327 1500 aa17.68■□□□□ 0.42
SHROOM3-205ENST00000481002 KNDC1Q76NI1 1749 aa17.68■□□□□ 0.42
SHROOM3-205ENST00000481002 NKTRP30414 1462 aaKnown RBP17.68■□□□□ 0.42
SHROOM3-205ENST00000481002 RALGAPBQ86X10 1494 aa17.67■□□□□ 0.42
SHROOM3-205ENST00000481002 TECPR2O15040 1411 aa17.66■□□□□ 0.42
SHROOM3-205ENST00000481002 GPRASP1Q5JY77 1395 aa17.66■□□□□ 0.42
SHROOM3-205ENST00000481002 SIRT1Q96EB6 747 aa17.65■□□□□ 0.42
SHROOM3-205ENST00000481002 STK26Q9P289 416 aa17.65■□□□□ 0.42
SHROOM3-205ENST00000481002 XIRP1Q702N8 1843 aaKnown RBP17.65■□□□□ 0.42
SHROOM3-205ENST00000481002 PROSER2Q86WR7 435 aaPredicted RBP17.64■□□□□ 0.41
SHROOM3-205ENST00000481002 ROCK2O75116 1388 aaKnown RBP17.64■□□□□ 0.41
SHROOM3-205ENST00000481002 PTCH1Q13635 1447 aa17.64■□□□□ 0.41
SHROOM3-205ENST00000481002 LRRC7Q96NW7 1537 aa17.63■□□□□ 0.41
SHROOM3-205ENST00000481002 DLC1Q96QB1 1528 aa17.63■□□□□ 0.41
SHROOM3-205ENST00000481002 ROBO2Q9HCK4 1378 aa17.62■□□□□ 0.41
SHROOM3-205ENST00000481002 FAM135BQ49AJ0 1406 aa17.62■□□□□ 0.41
SHROOM3-205ENST00000481002 TRAK1Q9UPV9 953 aa17.61■□□□□ 0.41
SHROOM3-205ENST00000481002 NCOA3Q9Y6Q9 1424 aa17.61■□□□□ 0.41
SHROOM3-205ENST00000481002 ARHGEF28Q8N1W1 1705 aaKnown RBP17.61■□□□□ 0.41
SHROOM3-205ENST00000481002 TMEM94Q12767 1356 aa17.59■□□□□ 0.41
SHROOM3-205ENST00000481002 CARD11Q9BXL7 1154 aa17.59■□□□□ 0.41
SHROOM3-205ENST00000481002 WAPLQ7Z5K2 1190 aa17.58■□□□□ 0.4
SHROOM3-205ENST00000481002 CERKQ8TCT0 537 aa17.57■□□□□ 0.4
SHROOM3-205ENST00000481002 RBM33Q96EV2 1170 aaKnown RBP17.57■□□□□ 0.4
SHROOM3-205ENST00000481002 IQSEC2Q5JU85 1478 aa17.56■□□□□ 0.4
SHROOM3-205ENST00000481002 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.56■□□□□ 0.4
SHROOM3-205ENST00000481002 PRAM1Q96QH2 718 aa17.56■□□□□ 0.4
SHROOM3-205ENST00000481002 PLEKHH1Q9ULM0 1364 aa17.55■□□□□ 0.4
SHROOM3-205ENST00000481002 ZEB1P37275 1124 aaPredicted RBP17.55■□□□□ 0.4
SHROOM3-205ENST00000481002 POGKQ9P215 609 aa17.55■□□□□ 0.4
SHROOM3-205ENST00000481002 NALCNQ8IZF0 1738 aa17.54■□□□□ 0.4
SHROOM3-205ENST00000481002 C19orf44Q9H6X5 657 aa17.53■□□□□ 0.4
SHROOM3-205ENST00000481002 ADGRL3Q9HAR2 1447 aa17.53■□□□□ 0.4
SHROOM3-205ENST00000481002 EIF3AQ14152 1382 aaKnown RBP17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms