RNA–Protein interactions for RNA: ENST00000480835.1

SNRNP200-205, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 540 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-205ENST00000480835 RIMS1Q86UR5 1692 aaKnown RBP20.91■□□□□ 0.94
SNRNP200-205ENST00000480835 NLRP1Q9C000 1473 aa20.89■□□□□ 0.94
SNRNP200-205ENST00000480835 ZFYVE9O95405 1425 aa20.89■□□□□ 0.94
SNRNP200-205ENST00000480835 ROCK2O75116 1388 aaKnown RBP20.89■□□□□ 0.93
SNRNP200-205ENST00000480835 HSPA5P11021 654 aaKnown RBP20.88■□□□□ 0.93
SNRNP200-205ENST00000480835 STAG3Q9UJ98 1225 aa20.88■□□□□ 0.93
SNRNP200-205ENST00000480835 VGFO15240 615 aaPredicted RBP20.87■□□□□ 0.93
SNRNP200-205ENST00000480835 CARD11Q9BXL7 1154 aa20.87■□□□□ 0.93
SNRNP200-205ENST00000480835 A2ML1A8K2U0 1454 aa20.87■□□□□ 0.93
SNRNP200-205ENST00000480835 USP47Q96K76 1375 aa20.85■□□□□ 0.93
SNRNP200-205ENST00000480835 ADGRF5Q8IZF2 1346 aa20.84■□□□□ 0.93
SNRNP200-205ENST00000480835 PIK3C2GO75747 1445 aa20.84■□□□□ 0.93
SNRNP200-205ENST00000480835 UBR1Q8IWV7 1749 aa20.84■□□□□ 0.93
SNRNP200-205ENST00000480835 CEBPAP49715 358 aaPredicted RBP20.82■□□□□ 0.92
SNRNP200-205ENST00000480835 SETBP1Q9Y6X0 1596 aa20.81■□□□□ 0.92
SNRNP200-205ENST00000480835 NBPF1Q3BBV0 1214 aa20.81■□□□□ 0.92
SNRNP200-205ENST00000480835 SETD1BQ9UPS6 1966 aaKnown RBP20.8■□□□□ 0.92
SNRNP200-205ENST00000480835 POLR1AO95602 1720 aaPredicted RBP20.8■□□□□ 0.92
SNRNP200-205ENST00000480835 IQGAP1P46940 1657 aa20.8■□□□□ 0.92
SNRNP200-205ENST00000480835 RIMS2Q9UQ26 1411 aa20.78■□□□□ 0.92
SNRNP200-205ENST00000480835 MYO3AQ8NEV4 1616 aa20.78■□□□□ 0.92
SNRNP200-205ENST00000480835 HDGFP51858 240 aaKnown RBP20.78■□□□□ 0.92
SNRNP200-205ENST00000480835 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.78■□□□□ 0.92
SNRNP200-205ENST00000480835 HIRIP3Q9BW71 556 aaPredicted RBP20.78■□□□□ 0.92
SNRNP200-205ENST00000480835 C14orf93Q9H972 538 aaKnown RBP20.77■□□□□ 0.92
SNRNP200-205ENST00000480835 DIEXFQ68CQ4 756 aaKnown RBP20.76■□□□□ 0.91
SNRNP200-205ENST00000480835 SCAF11Q99590 1463 aaKnown RBP20.75■□□□□ 0.91
SNRNP200-205ENST00000480835 CFAP70Q5T0N1 1121 aa20.75■□□□□ 0.91
SNRNP200-205ENST00000480835 TMEM2Q9UHN6 1383 aa20.73■□□□□ 0.91
SNRNP200-205ENST00000480835 ZNF142P52746 1687 aaPredicted RBP20.73■□□□□ 0.91
SNRNP200-205ENST00000480835 CEP170BQ9Y4F5 1589 aaPredicted RBP20.72■□□□□ 0.91
SNRNP200-205ENST00000480835 EIF3AQ14152 1382 aaKnown RBP20.72■□□□□ 0.91
SNRNP200-205ENST00000480835 PTPRMP28827 1452 aa20.71■□□□□ 0.91
SNRNP200-205ENST00000480835 SLIT1O75093 1534 aa20.71■□□□□ 0.91
SNRNP200-205ENST00000480835 ADGRB1O14514 1584 aa20.71■□□□□ 0.91
SNRNP200-205ENST00000480835 ST20-MTHFSA0A0A6YYL1 179 aa20.7■□□□□ 0.9
SNRNP200-205ENST00000480835 NUTM2DQ5VT03 806 aaPredicted RBP20.7■□□□□ 0.9
SNRNP200-205ENST00000480835 PLPPR3Q6T4P5 718 aa20.7■□□□□ 0.9
SNRNP200-205ENST00000480835 ARHGAP23Q9P227 1491 aa20.69■□□□□ 0.9
SNRNP200-205ENST00000480835 THEMISQ8N1K5 641 aaPredicted RBP20.69■□□□□ 0.9
SNRNP200-205ENST00000480835 ALKQ9UM73 1620 aa20.68■□□□□ 0.9
SNRNP200-205ENST00000480835 CCDC7Q96M83 1385 aa20.67■□□□□ 0.9
SNRNP200-205ENST00000480835 WASHC2AQ641Q2 1341 aa20.66■□□□□ 0.9
SNRNP200-205ENST00000480835 SETD1AO15047 1707 aaKnown RBP20.65■□□□□ 0.9
SNRNP200-205ENST00000480835 SLC24A1O60721 1099 aa20.65■□□□□ 0.9
SNRNP200-205ENST00000480835 EID1Q9Y6B2 187 aa20.65■□□□□ 0.9
SNRNP200-205ENST00000480835 NRXN3Q9Y4C0 1643 aa20.64■□□□□ 0.9
SNRNP200-205ENST00000480835 ASXL1Q8IXJ9 1541 aa20.63■□□□□ 0.89
SNRNP200-205ENST00000480835 PLEKHG1Q9ULL1 1385 aa20.62■□□□□ 0.89
SNRNP200-205ENST00000480835 KIF7Q2M1P5 1343 aa20.62■□□□□ 0.89
SNRNP200-205ENST00000480835 DDX10Q13206 875 aaKnown RBP20.62■□□□□ 0.89
SNRNP200-205ENST00000480835 C11orf95C9JLR9 678 aaPredicted RBP20.61■□□□□ 0.89
SNRNP200-205ENST00000480835 TESK2Q96S53 571 aa20.61■□□□□ 0.89
SNRNP200-205ENST00000480835 ARHGEF28Q8N1W1 1705 aaKnown RBP20.61■□□□□ 0.89
SNRNP200-205ENST00000480835 SBNO2Q9Y2G9 1366 aa20.6■□□□□ 0.89
SNRNP200-205ENST00000480835 TXNDC2Q86VQ3 553 aa20.6■□□□□ 0.89
SNRNP200-205ENST00000480835 TMF1P82094 1093 aa20.59■□□□□ 0.89
SNRNP200-205ENST00000480835 TMEM132EQ6IEE7 984 aa20.59■□□□□ 0.89
SNRNP200-205ENST00000480835 LTKP29376 864 aa20.57■□□□□ 0.88
SNRNP200-205ENST00000480835 YTHDC2Q9H6S0 1430 aaKnown RBP20.57■□□□□ 0.88
SNRNP200-205ENST00000480835 QRICH2Q9H0J4 1663 aa20.57■□□□□ 0.88
SNRNP200-205ENST00000480835 CENPJQ9HC77 1338 aaPredicted RBP20.56■□□□□ 0.88
SNRNP200-205ENST00000480835 DIP2AQ14689 1571 aa20.56■□□□□ 0.88
SNRNP200-205ENST00000480835 TRAK1Q9UPV9 953 aa20.56■□□□□ 0.88
SNRNP200-205ENST00000480835 DLC1Q96QB1 1528 aa20.56■□□□□ 0.88
SNRNP200-205ENST00000480835 CDCA8Q53HL2 280 aa20.55■□□□□ 0.88
SNRNP200-205ENST00000480835 LRPPRCP42704 1394 aaKnown RBP20.55■□□□□ 0.88
SNRNP200-205ENST00000480835 ADAMTS13Q76LX8 1427 aa20.54■□□□□ 0.88
SNRNP200-205ENST00000480835 KNDC1Q76NI1 1749 aa20.54■□□□□ 0.88
SNRNP200-205ENST00000480835 MED14O60244 1454 aa20.54■□□□□ 0.88
SNRNP200-205ENST00000480835 BCANQ96GW7 911 aa20.53■□□□□ 0.88
SNRNP200-205ENST00000480835 ABCC11Q96J66 1382 aa20.52■□□□□ 0.88
SNRNP200-205ENST00000480835 DISP3Q9P2K9 1392 aa20.52■□□□□ 0.88
SNRNP200-205ENST00000480835 ANKLE2Q86XL3 938 aa20.51■□□□□ 0.87
SNRNP200-205ENST00000480835 KDM4FA0A1W2PPD8 638 aa20.5■□□□□ 0.87
SNRNP200-205ENST00000480835 TBX22Q9Y458 520 aa20.5■□□□□ 0.87
SNRNP200-205ENST00000480835 METP08581 1390 aa20.49■□□□□ 0.87
SNRNP200-205ENST00000480835 SENP3Q9H4L4 574 aaPredicted RBP20.49■□□□□ 0.87
SNRNP200-205ENST00000480835 TECPR2O15040 1411 aa20.49■□□□□ 0.87
SNRNP200-205ENST00000480835 SIRT1Q96EB6 747 aa20.48■□□□□ 0.87
SNRNP200-205ENST00000480835 POLR3GLQ9BT43 218 aa20.48■□□□□ 0.87
SNRNP200-205ENST00000480835 STK26Q9P289 416 aa20.48■□□□□ 0.87
SNRNP200-205ENST00000480835 CPS1P31327 1500 aa20.47■□□□□ 0.87
SNRNP200-205ENST00000480835 FAM135BQ49AJ0 1406 aa20.45■□□□□ 0.86
SNRNP200-205ENST00000480835 PUS7Q96PZ0 661 aaKnown RBP20.45■□□□□ 0.86
SNRNP200-205ENST00000480835 PIK3R4Q99570 1358 aa20.45■□□□□ 0.86
SNRNP200-205ENST00000480835 POGKQ9P215 609 aa20.44■□□□□ 0.86
SNRNP200-205ENST00000480835 MIER1Q8N108 512 aa20.43■□□□□ 0.86
SNRNP200-205ENST00000480835 ANP32CO43423 234 aa20.42■□□□□ 0.86
SNRNP200-205ENST00000480835 PRAM1Q96QH2 718 aa20.42■□□□□ 0.86
SNRNP200-205ENST00000480835 EVC2Q86UK5 1308 aa20.42■□□□□ 0.86
SNRNP200-205ENST00000480835 SLC26A8Q96RN1 970 aa20.41■□□□□ 0.86
SNRNP200-205ENST00000480835 NPHP4O75161 1426 aaPredicted RBP20.4■□□□□ 0.86
SNRNP200-205ENST00000480835 MYOM1P52179 1685 aa20.4■□□□□ 0.86
SNRNP200-205ENST00000480835 TULP4Q9NRJ4 1543 aa20.39■□□□□ 0.85
SNRNP200-205ENST00000480835 XRN1Q8IZH2 1706 aaKnown RBP20.39■□□□□ 0.85
SNRNP200-205ENST00000480835 PTCH1Q13635 1447 aa20.37■□□□□ 0.85
SNRNP200-205ENST00000480835 PTPRUQ92729 1446 aa20.37■□□□□ 0.85
SNRNP200-205ENST00000480835 CHD2O14647 1828 aaKnown RBP20.37■□□□□ 0.85
SNRNP200-205ENST00000480835 SAFB2Q14151 953 aaKnown RBP eCLIP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms