RNA–Protein interactions for RNA: ENST00000480825.6

CSF3R-210, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 2

Gene CSF3R, Length 6,074 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-210ENST00000480825 NUCB2P80303 420 aa14.16□□□□□ -0.14
CSF3R-210ENST00000480825 RDXP35241 583 aaKnown RBP14.16□□□□□ -0.14
CSF3R-210ENST00000480825 FBXW7Q969H0 707 aa14.16□□□□□ -0.14
CSF3R-210ENST00000480825 COG6Q9Y2V7 657 aa14.16□□□□□ -0.14
CSF3R-210ENST00000480825 CCDC66A2RUB6 948 aa14.16□□□□□ -0.14
CSF3R-210ENST00000480825 APPP05067 770 aa14.16□□□□□ -0.14
CSF3R-210ENST00000480825 VPS37CA5D8V6 355 aaPredicted RBP14.16□□□□□ -0.14
CSF3R-210ENST00000480825 ELL2O00472 640 aaPredicted RBP14.15□□□□□ -0.14
CSF3R-210ENST00000480825 CCDC73Q6ZRK6 1079 aa14.15□□□□□ -0.14
CSF3R-210ENST00000480825 AMOTL1Q8IY63 956 aa14.15□□□□□ -0.14
CSF3R-210ENST00000480825 LTV1Q96GA3 475 aaPredicted RBP14.15□□□□□ -0.14
CSF3R-210ENST00000480825 SMC3Q9UQE7 1217 aa14.15□□□□□ -0.14
CSF3R-210ENST00000480825 ERCC4Q92889 916 aaPredicted RBP14.14□□□□□ -0.15
CSF3R-210ENST00000480825 RNF20Q5VTR2 975 aa14.14□□□□□ -0.15
CSF3R-210ENST00000480825 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.13□□□□□ -0.15
CSF3R-210ENST00000480825 NGDNQ8NEJ9 315 aaKnown RBP14.13□□□□□ -0.15
CSF3R-210ENST00000480825 MRE11P49959 708 aa14.13□□□□□ -0.15
CSF3R-210ENST00000480825 CT47A1Q5JQC4 288 aaPredicted RBP14.13□□□□□ -0.15
CSF3R-210ENST00000480825 L3MBTL2Q969R5 705 aa14.13□□□□□ -0.15
CSF3R-210ENST00000480825 BCL11BQ9C0K0 894 aaPredicted RBP14.12□□□□□ -0.15
CSF3R-210ENST00000480825 DDX19BQ9UMR2 479 aa14.12□□□□□ -0.15
CSF3R-210ENST00000480825 VPS8Q8N3P4 1428 aa14.12□□□□□ -0.15
CSF3R-210ENST00000480825 ANKRD30AQ9BXX3 1397 aa14.12□□□□□ -0.15
CSF3R-210ENST00000480825 NOL10Q9BSC4 688 aaKnown RBP14.12□□□□□ -0.15
CSF3R-210ENST00000480825 NASPP49321 788 aaPredicted RBP14.12□□□□□ -0.15
CSF3R-210ENST00000480825 CAGE1Q8TC20 777 aa14.12□□□□□ -0.15
CSF3R-210ENST00000480825 FMN1Q68DA7 1419 aa14.12□□□□□ -0.15
CSF3R-210ENST00000480825 ZBED9Q6R2W3 1325 aa14.11□□□□□ -0.15
CSF3R-210ENST00000480825 RAD21O60216 631 aa14.11□□□□□ -0.15
CSF3R-210ENST00000480825 IFIT2P09913 472 aaKnown RBP14.11□□□□□ -0.15
CSF3R-210ENST00000480825 CCDC173Q0VFZ6 552 aa14.11□□□□□ -0.15
CSF3R-210ENST00000480825 TRDNQ13061 729 aa14.11□□□□□ -0.15
CSF3R-210ENST00000480825 CARMIL1Q5VZK9 1371 aa14.11□□□□□ -0.15
CSF3R-210ENST00000480825 BAZ1BQ9UIG0 1483 aaKnown RBP14.11□□□□□ -0.15
CSF3R-210ENST00000480825 NAT10Q9H0A0 1025 aaKnown RBP14.11□□□□□ -0.15
CSF3R-210ENST00000480825 DHX16O60231 1041 aaKnown RBP14.1□□□□□ -0.15
CSF3R-210ENST00000480825 NFXL1Q6ZNB6 911 aa14.1□□□□□ -0.15
CSF3R-210ENST00000480825 ODF2Q5BJF6 829 aa14.1□□□□□ -0.15
CSF3R-210ENST00000480825 INTS3Q68E01 1043 aaKnown RBP14.1□□□□□ -0.15
CSF3R-210ENST00000480825 OLFM4Q6UX06 510 aa14.1□□□□□ -0.15
CSF3R-210ENST00000480825 CTDP1Q9Y5B0 961 aaPredicted RBP14.1□□□□□ -0.15
CSF3R-210ENST00000480825 NEXNQ0ZGT2 675 aa14.09□□□□□ -0.15
CSF3R-210ENST00000480825 PDILTQ8N807 584 aa14.09□□□□□ -0.15
CSF3R-210ENST00000480825 TRIM34Q9BYJ4 488 aa14.09□□□□□ -0.15
CSF3R-210ENST00000480825 NFKBIBQ15653 356 aa14.09□□□□□ -0.15
CSF3R-210ENST00000480825 KANK4Q5T7N3 995 aaPredicted RBP14.09□□□□□ -0.15
CSF3R-210ENST00000480825 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.09□□□□□ -0.153e-10■■■■■ 130.4
CSF3R-210ENST00000480825 C9orf78Q9NZ63 289 aaPredicted RBP14.09□□□□□ -0.15
CSF3R-210ENST00000480825 FOSBP53539 338 aa14.08□□□□□ -0.16
CSF3R-210ENST00000480825 SAFBQ15424 915 aaKnown RBP eCLIP14.08□□□□□ -0.16
CSF3R-210ENST00000480825 HSP90AB2PQ58FF8 381 aa14.08□□□□□ -0.16
CSF3R-210ENST00000480825 PANK3Q9H999 370 aa14.08□□□□□ -0.16
CSF3R-210ENST00000480825 ERICH2A1L162 156 aa14.08□□□□□ -0.16
CSF3R-210ENST00000480825 LEKR1Q6ZMV7 388 aa14.07□□□□□ -0.16
CSF3R-210ENST00000480825 PKNOX2Q96KN3 472 aa14.07□□□□□ -0.16
CSF3R-210ENST00000480825 CCDC43Q96MW1 224 aaKnown RBP14.07□□□□□ -0.16
CSF3R-210ENST00000480825 TSPYL1Q9H0U9 437 aa14.07□□□□□ -0.16
CSF3R-210ENST00000480825 MYO6Q9UM54 1294 aa14.07□□□□□ -0.16
CSF3R-210ENST00000480825 C1orf141Q5JVX7 400 aa14.07□□□□□ -0.16
CSF3R-210ENST00000480825 C22orf23Q9BZE7 217 aa14.07□□□□□ -0.16
CSF3R-210ENST00000480825 OFD1O75665 1012 aa14.07□□□□□ -0.16
CSF3R-210ENST00000480825 DZIP1LQ8IYY4 767 aaKnown RBP14.07□□□□□ -0.16
CSF3R-210ENST00000480825 ROCK1Q13464 1354 aa14.06□□□□□ -0.16
CSF3R-210ENST00000480825 API5Q9BZZ5 524 aaKnown RBP14.06□□□□□ -0.16
CSF3R-210ENST00000480825 PLCD4Q9BRC7 762 aa14.06□□□□□ -0.16
CSF3R-210ENST00000480825 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.06□□□□□ -0.16
CSF3R-210ENST00000480825 RNF214Q8ND24 703 aa14.05□□□□□ -0.16
CSF3R-210ENST00000480825 EPS15P42566 896 aa14.05□□□□□ -0.16
CSF3R-210ENST00000480825 TTLL5Q6EMB2 1281 aa14.05□□□□□ -0.16
CSF3R-210ENST00000480825 LETM1O95202 739 aaPredicted RBP14.04□□□□□ -0.16
CSF3R-210ENST00000480825 CNKSR2Q8WXI2 1034 aa14.04□□□□□ -0.16
CSF3R-210ENST00000480825 TEFQ10587 303 aa14.04□□□□□ -0.16
CSF3R-210ENST00000480825 HSP90AB3PQ58FF7 597 aa14.04□□□□□ -0.16
CSF3R-210ENST00000480825 NUTM2DQ5VT03 806 aaPredicted RBP14.04□□□□□ -0.16
CSF3R-210ENST00000480825 CCP110O43303 1012 aa14.04□□□□□ -0.16
CSF3R-210ENST00000480825 ZFYVE27Q5T4F4 411 aa14.04□□□□□ -0.16
CSF3R-210ENST00000480825 KRI1Q8N9T8 703 aaKnown RBP14.04□□□□□ -0.16
CSF3R-210ENST00000480825 TRIM5Q9C035 493 aa14.04□□□□□ -0.16
CSF3R-210ENST00000480825 G3BP1Q13283 466 aaKnown RBP eCLIP14.04□□□□□ -0.16
CSF3R-210ENST00000480825 PRKRIP1Q9H875 184 aaPredicted RBP14.04□□□□□ -0.16
CSF3R-210ENST00000480825 CUX2O14529 1486 aa14.03□□□□□ -0.16
CSF3R-210ENST00000480825 EIF2S2P20042 333 aaKnown RBP14.03□□□□□ -0.16
CSF3R-210ENST00000480825 SKIDA1Q1XH10 827 aa14.03□□□□□ -0.16
CSF3R-210ENST00000480825 AXDND1Q5T1B0 1012 aaPredicted RBP14.03□□□□□ -0.16
CSF3R-210ENST00000480825 SDF4Q9BRK5 362 aa14.03□□□□□ -0.16
CSF3R-210ENST00000480825 HMGN5P82970 282 aaKnown RBP14.03□□□□□ -0.16
CSF3R-210ENST00000480825 TRAK1Q9UPV9 953 aa14.03□□□□□ -0.16
CSF3R-210ENST00000480825 NGEFQ8N5V2 710 aa14.03□□□□□ -0.16
CSF3R-210ENST00000480825 COG3Q96JB2 828 aa14.02□□□□□ -0.16
CSF3R-210ENST00000480825 ST20-MTHFSA0A0A6YYL1 179 aa14.02□□□□□ -0.17
CSF3R-210ENST00000480825 APAF1O14727 1248 aa14.02□□□□□ -0.17
CSF3R-210ENST00000480825 EID1Q9Y6B2 187 aa14.02□□□□□ -0.17
CSF3R-210ENST00000480825 KIF3BO15066 747 aa14.02□□□□□ -0.17
CSF3R-210ENST00000480825 ERC2O15083 957 aa14.02□□□□□ -0.17
CSF3R-210ENST00000480825 TRHP20396 242 aaPredicted RBP14.02□□□□□ -0.17
CSF3R-210ENST00000480825 EFCAB2Q5VUJ9 269 aa14.02□□□□□ -0.17
CSF3R-210ENST00000480825 TTC5Q8N0Z6 440 aa14.02□□□□□ -0.17
CSF3R-210ENST00000480825 TRAK2O60296 914 aa14.01□□□□□ -0.17
CSF3R-210ENST00000480825 TSPY26PQ9H489 355 aa14.01□□□□□ -0.17
CSF3R-210ENST00000480825 SMC2O95347 1197 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms