RNA–Protein interactions for RNA: ENST00000480650.3

PDZD4-206, Transcript of PDZ domain containing 4, humanhuman

TSL 5

Gene PDZD4, Length 876 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-206ENST00000480650 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.34■□□□□ 0.37
PDZD4-206ENST00000480650 NCKAP5LQ9HCH0 1330 aa17.34■□□□□ 0.37
PDZD4-206ENST00000480650 STRCQ7RTU9 1775 aa17.33■□□□□ 0.37
PDZD4-206ENST00000480650 TMEM2Q9UHN6 1383 aa17.33■□□□□ 0.36
PDZD4-206ENST00000480650 SENP3Q9H4L4 574 aaPredicted RBP17.33■□□□□ 0.36
PDZD4-206ENST00000480650 RIMS2Q9UQ26 1411 aa17.32■□□□□ 0.36
PDZD4-206ENST00000480650 RPGRIP1LQ68CZ1 1315 aa17.32■□□□□ 0.36
PDZD4-206ENST00000480650 CLSPNQ9HAW4 1339 aa17.3■□□□□ 0.36
PDZD4-206ENST00000480650 LTKP29376 864 aa17.3■□□□□ 0.36
PDZD4-206ENST00000480650 KDM2AQ9Y2K7 1162 aa17.3■□□□□ 0.36
PDZD4-206ENST00000480650 VGFO15240 615 aaPredicted RBP17.29■□□□□ 0.36
PDZD4-206ENST00000480650 DCAF11Q8TEB1 546 aa17.29■□□□□ 0.36
PDZD4-206ENST00000480650 SPATA31E1Q6ZUB1 1445 aa17.29■□□□□ 0.36
PDZD4-206ENST00000480650 SLIT1O75093 1534 aa17.28■□□□□ 0.36
PDZD4-206ENST00000480650 DMRT2Q9Y5R5 561 aa17.28■□□□□ 0.36
PDZD4-206ENST00000480650 ARHGAP23Q9P227 1491 aa17.27■□□□□ 0.36
PDZD4-206ENST00000480650 TONSLQ96HA7 1378 aa17.27■□□□□ 0.35
PDZD4-206ENST00000480650 SCAF11Q99590 1463 aaKnown RBP17.26■□□□□ 0.35
PDZD4-206ENST00000480650 POLR1AO95602 1720 aaPredicted RBP17.24■□□□□ 0.35
PDZD4-206ENST00000480650 NEURL4Q96JN8 1562 aa17.24■□□□□ 0.35
PDZD4-206ENST00000480650 ZFYVE9O95405 1425 aa17.24■□□□□ 0.35
PDZD4-206ENST00000480650 L3MBTL2Q969R5 705 aa17.24■□□□□ 0.35
PDZD4-206ENST00000480650 NPHP4O75161 1426 aaPredicted RBP17.23■□□□□ 0.35
PDZD4-206ENST00000480650 NEXMIFQ5QGS0 1516 aa17.23■□□□□ 0.35
PDZD4-206ENST00000480650 STAC3Q96MF2 364 aa17.22■□□□□ 0.35
PDZD4-206ENST00000480650 PPLO60437 1756 aa17.22■□□□□ 0.35
PDZD4-206ENST00000480650 PLEKHG1Q9ULL1 1385 aa17.21■□□□□ 0.35
PDZD4-206ENST00000480650 SLC26A8Q96RN1 970 aa17.21■□□□□ 0.35
PDZD4-206ENST00000480650 ADGRF5Q8IZF2 1346 aa17.21■□□□□ 0.34
PDZD4-206ENST00000480650 MED14O60244 1454 aa17.18■□□□□ 0.34
PDZD4-206ENST00000480650 IFT172Q9UG01 1749 aa17.18■□□□□ 0.34
PDZD4-206ENST00000480650 IQGAP1P46940 1657 aa17.17■□□□□ 0.34
PDZD4-206ENST00000480650 CERKQ8TCT0 537 aa17.16■□□□□ 0.34
PDZD4-206ENST00000480650 TIMELESSQ9UNS1 1208 aa17.16■□□□□ 0.34
PDZD4-206ENST00000480650 TBX22Q9Y458 520 aa17.15■□□□□ 0.34
PDZD4-206ENST00000480650 MYOM2P54296 1465 aa17.14■□□□□ 0.33
PDZD4-206ENST00000480650 CFAP70Q5T0N1 1121 aa17.13■□□□□ 0.33
PDZD4-206ENST00000480650 SETBP1Q9Y6X0 1596 aa17.11■□□□□ 0.33
PDZD4-206ENST00000480650 C14orf93Q9H972 538 aaKnown RBP17.1■□□□□ 0.33
PDZD4-206ENST00000480650 PIK3C2GO75747 1445 aa17.1■□□□□ 0.33
PDZD4-206ENST00000480650 ADAMTS13Q76LX8 1427 aa17.1■□□□□ 0.33
PDZD4-206ENST00000480650 ALKQ9UM73 1620 aa17.1■□□□□ 0.33
PDZD4-206ENST00000480650 TMEM132EQ6IEE7 984 aa17.09■□□□□ 0.33
PDZD4-206ENST00000480650 DIP2AQ14689 1571 aa17.08■□□□□ 0.32
PDZD4-206ENST00000480650 NRXN1Q9ULB1 1477 aa17.08■□□□□ 0.32
PDZD4-206ENST00000480650 PRAG1Q86YV5 1406 aa17.08■□□□□ 0.32
PDZD4-206ENST00000480650 STK26Q9P289 416 aa17.08■□□□□ 0.32
PDZD4-206ENST00000480650 NRXN3Q9Y4C0 1643 aa17.07■□□□□ 0.32
PDZD4-206ENST00000480650 METP08581 1390 aa17.07■□□□□ 0.32
PDZD4-206ENST00000480650 ZNF335Q9H4Z2 1342 aaPredicted RBP17.07■□□□□ 0.32
PDZD4-206ENST00000480650 NBPF8Q3BBV2 869 aa17.07■□□□□ 0.32
PDZD4-206ENST00000480650 LTBP4Q8N2S1 1624 aa17.07■□□□□ 0.32
PDZD4-206ENST00000480650 KCNA6P17658 529 aa17.06■□□□□ 0.32
PDZD4-206ENST00000480650 AMOTL2Q9Y2J4 779 aa17.06■□□□□ 0.32
PDZD4-206ENST00000480650 PIK3R4Q99570 1358 aa17.04■□□□□ 0.32
PDZD4-206ENST00000480650 LAMC1P11047 1609 aa17.04■□□□□ 0.32
PDZD4-206ENST00000480650 NBPF1Q3BBV0 1214 aa17.04■□□□□ 0.32
PDZD4-206ENST00000480650 ILDR2Q71H61 639 aa17.04■□□□□ 0.32
PDZD4-206ENST00000480650 PROSER2Q86WR7 435 aaPredicted RBP17.03■□□□□ 0.32
PDZD4-206ENST00000480650 ROCK2O75116 1388 aaKnown RBP17.02■□□□□ 0.32
PDZD4-206ENST00000480650 CHD2O14647 1828 aaKnown RBP17.01■□□□□ 0.31
PDZD4-206ENST00000480650 TRAK1Q9UPV9 953 aa17.01■□□□□ 0.31
PDZD4-206ENST00000480650 SETD1AO15047 1707 aaKnown RBP17■□□□□ 0.31
PDZD4-206ENST00000480650 PTPRUQ92729 1446 aa17■□□□□ 0.31
PDZD4-206ENST00000480650 CARD11Q9BXL7 1154 aa17■□□□□ 0.31
PDZD4-206ENST00000480650 KIAA1210Q9ULL0 1709 aa17■□□□□ 0.31
PDZD4-206ENST00000480650 YTHDC2Q9H6S0 1430 aaKnown RBP16.99■□□□□ 0.31
PDZD4-206ENST00000480650 C14orf37Q86TY3 774 aa16.99■□□□□ 0.31
PDZD4-206ENST00000480650 LRPPRCP42704 1394 aaKnown RBP16.99■□□□□ 0.31
PDZD4-206ENST00000480650 ZEB1P37275 1124 aaPredicted RBP16.98■□□□□ 0.31
PDZD4-206ENST00000480650 RBM33Q96EV2 1170 aaKnown RBP16.98■□□□□ 0.31
PDZD4-206ENST00000480650 POGKQ9P215 609 aa16.98■□□□□ 0.31
PDZD4-206ENST00000480650 TRPM1Q7Z4N2 1603 aa16.98■□□□□ 0.31
PDZD4-206ENST00000480650 ABCC11Q96J66 1382 aa16.96■□□□□ 0.31
PDZD4-206ENST00000480650 STRCP1A6NGW2 1772 aa16.96■□□□□ 0.31
PDZD4-206ENST00000480650 CPS1P31327 1500 aa16.96■□□□□ 0.3
PDZD4-206ENST00000480650 ASXL1Q8IXJ9 1541 aa16.96■□□□□ 0.3
PDZD4-206ENST00000480650 DISP3Q9P2K9 1392 aa16.95■□□□□ 0.3
PDZD4-206ENST00000480650 SAFB2Q14151 953 aaKnown RBP eCLIP16.95■□□□□ 0.3
PDZD4-206ENST00000480650 WAPLQ7Z5K2 1190 aa16.95■□□□□ 0.3
PDZD4-206ENST00000480650 ADGRB1O14514 1584 aa16.94■□□□□ 0.3
PDZD4-206ENST00000480650 RALGAPBQ86X10 1494 aa16.94■□□□□ 0.3
PDZD4-206ENST00000480650 PRAM1Q96QH2 718 aa16.94■□□□□ 0.3
PDZD4-206ENST00000480650 NWD1Q149M9 1564 aa16.94■□□□□ 0.3
PDZD4-206ENST00000480650 NKTRP30414 1462 aaKnown RBP16.93■□□□□ 0.3
PDZD4-206ENST00000480650 ROBO2Q9HCK4 1378 aa16.92■□□□□ 0.3
PDZD4-206ENST00000480650 SIRT1Q96EB6 747 aa16.92■□□□□ 0.3
PDZD4-206ENST00000480650 XRN1Q8IZH2 1706 aaKnown RBP16.92■□□□□ 0.3
PDZD4-206ENST00000480650 TMEM94Q12767 1356 aa16.91■□□□□ 0.3
PDZD4-206ENST00000480650 LRRC7Q96NW7 1537 aa16.91■□□□□ 0.3
PDZD4-206ENST00000480650 PTCH1Q13635 1447 aa16.9■□□□□ 0.3
PDZD4-206ENST00000480650 EIF3AQ14152 1382 aaKnown RBP16.89■□□□□ 0.3
PDZD4-206ENST00000480650 GPRASP1Q5JY77 1395 aa16.89■□□□□ 0.3
PDZD4-206ENST00000480650 TECPR2O15040 1411 aa16.89■□□□□ 0.29
PDZD4-206ENST00000480650 KNDC1Q76NI1 1749 aa16.89■□□□□ 0.29
PDZD4-206ENST00000480650 FAM135BQ49AJ0 1406 aa16.88■□□□□ 0.29
PDZD4-206ENST00000480650 CENPJQ9HC77 1338 aaPredicted RBP16.88■□□□□ 0.29
PDZD4-206ENST00000480650 MSH6P52701 1360 aa16.88■□□□□ 0.29
PDZD4-206ENST00000480650 PLEKHH1Q9ULM0 1364 aa16.88■□□□□ 0.29
PDZD4-206ENST00000480650 DLC1Q96QB1 1528 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms