RNA–Protein interactions for RNA: ENST00000480609.1

COL4A2-206, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 2

Gene COL4A2, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-206ENST00000480609 SLIT1O75093 1534 aa18.86■□□□□ 0.61
COL4A2-206ENST00000480609 GPRASP1Q5JY77 1395 aa18.85■□□□□ 0.61
COL4A2-206ENST00000480609 VGFO15240 615 aaPredicted RBP18.85■□□□□ 0.61
COL4A2-206ENST00000480609 CEP170BQ9Y4F5 1589 aaPredicted RBP18.85■□□□□ 0.61
COL4A2-206ENST00000480609 RALGAPBQ86X10 1494 aa18.84■□□□□ 0.61
COL4A2-206ENST00000480609 TMEM2Q9UHN6 1383 aa18.84■□□□□ 0.61
COL4A2-206ENST00000480609 KIAA1210Q9ULL0 1709 aa18.84■□□□□ 0.61
COL4A2-206ENST00000480609 NBPF8Q3BBV2 869 aa18.84■□□□□ 0.61
COL4A2-206ENST00000480609 HDGFP51858 240 aaKnown RBP18.83■□□□□ 0.6
COL4A2-206ENST00000480609 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.83■□□□□ 0.6
COL4A2-206ENST00000480609 PIK3C2GO75747 1445 aa18.83■□□□□ 0.6
COL4A2-206ENST00000480609 MYO5BQ9ULV0 1848 aa18.82■□□□□ 0.6
COL4A2-206ENST00000480609 THEMISQ8N1K5 641 aaPredicted RBP18.82■□□□□ 0.6
COL4A2-206ENST00000480609 STAG3Q9UJ98 1225 aa18.81■□□□□ 0.6
COL4A2-206ENST00000480609 RIMS2Q9UQ26 1411 aa18.81■□□□□ 0.6
COL4A2-206ENST00000480609 CHGAP10645 457 aaKnown RBP18.8■□□□□ 0.6
COL4A2-206ENST00000480609 ZNF326Q5BKZ1 582 aaKnown RBP18.8■□□□□ 0.6
COL4A2-206ENST00000480609 LAMC1P11047 1609 aa18.79■□□□□ 0.6
COL4A2-206ENST00000480609 TRPM1Q7Z4N2 1603 aa18.78■□□□□ 0.6
COL4A2-206ENST00000480609 ADGRF5Q8IZF2 1346 aa18.78■□□□□ 0.6
COL4A2-206ENST00000480609 C14orf93Q9H972 538 aaKnown RBP18.77■□□□□ 0.6
COL4A2-206ENST00000480609 SETBP1Q9Y6X0 1596 aa18.76■□□□□ 0.59
COL4A2-206ENST00000480609 KDM2AQ9Y2K7 1162 aa18.76■□□□□ 0.59
COL4A2-206ENST00000480609 PLEKHG1Q9ULL1 1385 aa18.74■□□□□ 0.59
COL4A2-206ENST00000480609 ADGRB1O14514 1584 aa18.71■□□□□ 0.59
COL4A2-206ENST00000480609 MED14O60244 1454 aa18.71■□□□□ 0.59
COL4A2-206ENST00000480609 SCAF11Q99590 1463 aaKnown RBP18.71■□□□□ 0.59
COL4A2-206ENST00000480609 EID1Q9Y6B2 187 aa18.7■□□□□ 0.58
COL4A2-206ENST00000480609 ROCK2O75116 1388 aaKnown RBP18.69■□□□□ 0.58
COL4A2-206ENST00000480609 NRXN3Q9Y4C0 1643 aa18.69■□□□□ 0.58
COL4A2-206ENST00000480609 LTKP29376 864 aa18.68■□□□□ 0.58
COL4A2-206ENST00000480609 TXNDC2Q86VQ3 553 aa18.67■□□□□ 0.58
COL4A2-206ENST00000480609 DIP2AQ14689 1571 aa18.67■□□□□ 0.58
COL4A2-206ENST00000480609 ALKQ9UM73 1620 aa18.67■□□□□ 0.58
COL4A2-206ENST00000480609 ADAMTS13Q76LX8 1427 aa18.66■□□□□ 0.58
COL4A2-206ENST00000480609 SETD1AO15047 1707 aaKnown RBP18.66■□□□□ 0.58
COL4A2-206ENST00000480609 NBPF1Q3BBV0 1214 aa18.66■□□□□ 0.58
COL4A2-206ENST00000480609 CFAP70Q5T0N1 1121 aa18.66■□□□□ 0.58
COL4A2-206ENST00000480609 ANKLE2Q86XL3 938 aa18.66■□□□□ 0.58
COL4A2-206ENST00000480609 LMTK3Q96Q04 1460 aa18.65■□□□□ 0.58
COL4A2-206ENST00000480609 EIF4G2P78344 907 aaKnown RBP eCLIP18.65■□□□□ 0.58
COL4A2-206ENST00000480609 CARD11Q9BXL7 1154 aa18.65■□□□□ 0.58
COL4A2-206ENST00000480609 PLPPR3Q6T4P5 718 aa18.64■□□□□ 0.57
COL4A2-206ENST00000480609 TBX22Q9Y458 520 aa18.64■□□□□ 0.57
COL4A2-206ENST00000480609 ASXL1Q8IXJ9 1541 aa18.64■□□□□ 0.57
COL4A2-206ENST00000480609 USP47Q96K76 1375 aa18.63■□□□□ 0.57
COL4A2-206ENST00000480609 PIK3R4Q99570 1358 aa18.63■□□□□ 0.57
COL4A2-206ENST00000480609 IQGAP1P46940 1657 aa18.63■□□□□ 0.57
COL4A2-206ENST00000480609 TECPR2O15040 1411 aa18.61■□□□□ 0.57
COL4A2-206ENST00000480609 DLC1Q96QB1 1528 aa18.6■□□□□ 0.57
COL4A2-206ENST00000480609 ABCC11Q96J66 1382 aa18.6■□□□□ 0.57
COL4A2-206ENST00000480609 SBNO2Q9Y2G9 1366 aa18.6■□□□□ 0.57
COL4A2-206ENST00000480609 SLC24A1O60721 1099 aa18.6■□□□□ 0.57
COL4A2-206ENST00000480609 NUTM2DQ5VT03 806 aaPredicted RBP18.6■□□□□ 0.57
COL4A2-206ENST00000480609 SIRT1Q96EB6 747 aa18.6■□□□□ 0.57
COL4A2-206ENST00000480609 LRPPRCP42704 1394 aaKnown RBP18.59■□□□□ 0.57
COL4A2-206ENST00000480609 POLR1AO95602 1720 aaPredicted RBP18.59■□□□□ 0.57
COL4A2-206ENST00000480609 EIF3AQ14152 1382 aaKnown RBP18.58■□□□□ 0.57
COL4A2-206ENST00000480609 HSPA5P11021 654 aaKnown RBP18.58■□□□□ 0.56
COL4A2-206ENST00000480609 NPHP4O75161 1426 aaPredicted RBP18.57■□□□□ 0.56
COL4A2-206ENST00000480609 YTHDC2Q9H6S0 1430 aaKnown RBP18.57■□□□□ 0.56
COL4A2-206ENST00000480609 ZNF316A6NFI3 1004 aaPredicted RBP18.57■□□□□ 0.56
COL4A2-206ENST00000480609 METP08581 1390 aa18.55■□□□□ 0.56
COL4A2-206ENST00000480609 KNDC1Q76NI1 1749 aa18.54■□□□□ 0.56
COL4A2-206ENST00000480609 FAM135BQ49AJ0 1406 aa18.54■□□□□ 0.56
COL4A2-206ENST00000480609 TESK2Q96S53 571 aa18.53■□□□□ 0.56
COL4A2-206ENST00000480609 CPS1P31327 1500 aa18.52■□□□□ 0.56
COL4A2-206ENST00000480609 PTCH1Q13635 1447 aa18.51■□□□□ 0.55
COL4A2-206ENST00000480609 ST20-MTHFSA0A0A6YYL1 179 aa18.51■□□□□ 0.55
COL4A2-206ENST00000480609 TMEM132EQ6IEE7 984 aa18.51■□□□□ 0.55
COL4A2-206ENST00000480609 ARHGEF28Q8N1W1 1705 aaKnown RBP18.51■□□□□ 0.55
COL4A2-206ENST00000480609 XRN1Q8IZH2 1706 aaKnown RBP18.49■□□□□ 0.55
COL4A2-206ENST00000480609 PTPRUQ92729 1446 aa18.49■□□□□ 0.55
COL4A2-206ENST00000480609 CENPJQ9HC77 1338 aaPredicted RBP18.49■□□□□ 0.55
COL4A2-206ENST00000480609 PUS7Q96PZ0 661 aaKnown RBP18.48■□□□□ 0.55
COL4A2-206ENST00000480609 STRCQ7RTU9 1775 aa18.47■□□□□ 0.55
COL4A2-206ENST00000480609 NCKAP5LQ9HCH0 1330 aa18.47■□□□□ 0.55
COL4A2-206ENST00000480609 NWD1Q149M9 1564 aa18.47■□□□□ 0.55
COL4A2-206ENST00000480609 SLC26A8Q96RN1 970 aa18.46■□□□□ 0.55
COL4A2-206ENST00000480609 CHD2O14647 1828 aaKnown RBP18.46■□□□□ 0.55
COL4A2-206ENST00000480609 HSPA2P54652 639 aa18.45■□□□□ 0.54
COL4A2-206ENST00000480609 TRAK1Q9UPV9 953 aa18.45■□□□□ 0.54
COL4A2-206ENST00000480609 BCANQ96GW7 911 aa18.44■□□□□ 0.54
COL4A2-206ENST00000480609 KCNA6P17658 529 aa18.43■□□□□ 0.54
COL4A2-206ENST00000480609 AMOTL2Q9Y2J4 779 aa18.43■□□□□ 0.54
COL4A2-206ENST00000480609 CDCA8Q53HL2 280 aa18.42■□□□□ 0.54
COL4A2-206ENST00000480609 DMRT2Q9Y5R5 561 aa18.42■□□□□ 0.54
COL4A2-206ENST00000480609 CCDC7Q96M83 1385 aa18.42■□□□□ 0.54
COL4A2-206ENST00000480609 ROBO2Q9HCK4 1378 aa18.42■□□□□ 0.54
COL4A2-206ENST00000480609 NKTRP30414 1462 aaKnown RBP18.41■□□□□ 0.54
COL4A2-206ENST00000480609 TMF1P82094 1093 aa18.41■□□□□ 0.54
COL4A2-206ENST00000480609 WASHC2AQ641Q2 1341 aa18.41■□□□□ 0.54
COL4A2-206ENST00000480609 ADGRB2O60241 1585 aa18.4■□□□□ 0.54
COL4A2-206ENST00000480609 QRICH2Q9H0J4 1663 aa18.4■□□□□ 0.54
COL4A2-206ENST00000480609 NCOA3Q9Y6Q9 1424 aa18.4■□□□□ 0.54
COL4A2-206ENST00000480609 C11orf95C9JLR9 678 aaPredicted RBP18.39■□□□□ 0.53
COL4A2-206ENST00000480609 PRAM1Q96QH2 718 aa18.39■□□□□ 0.53
COL4A2-206ENST00000480609 STK26Q9P289 416 aa18.38■□□□□ 0.53
COL4A2-206ENST00000480609 KIF7Q2M1P5 1343 aa18.38■□□□□ 0.53
COL4A2-206ENST00000480609 HIRIP3Q9BW71 556 aaPredicted RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms