RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 KIF1BO60333 1816 aa16.15■□□□□ 0.18
CLDN11-205ENST00000480067 ZNF142P52746 1687 aaPredicted RBP16.14■□□□□ 0.18
CLDN11-205ENST00000480067 UBR1Q8IWV7 1749 aa16.14■□□□□ 0.17
CLDN11-205ENST00000480067 VGFO15240 615 aaPredicted RBP16.14■□□□□ 0.17
CLDN11-205ENST00000480067 TONSLQ96HA7 1378 aa16.14■□□□□ 0.17
CLDN11-205ENST00000480067 KDM5AP29375 1690 aaKnown RBP16.14■□□□□ 0.17
CLDN11-205ENST00000480067 L3MBTL2Q969R5 705 aa16.13■□□□□ 0.17
CLDN11-205ENST00000480067 KDM2AQ9Y2K7 1162 aa16.13■□□□□ 0.17
CLDN11-205ENST00000480067 RIMS2Q9UQ26 1411 aa16.13■□□□□ 0.17
CLDN11-205ENST00000480067 LTKP29376 864 aa16.13■□□□□ 0.17
CLDN11-205ENST00000480067 NEURL4Q96JN8 1562 aa16.12■□□□□ 0.17
CLDN11-205ENST00000480067 STAC3Q96MF2 364 aa16.12■□□□□ 0.17
CLDN11-205ENST00000480067 TIMELESSQ9UNS1 1208 aa16.12■□□□□ 0.17
CLDN11-205ENST00000480067 BCANQ96GW7 911 aa16.11■□□□□ 0.17
CLDN11-205ENST00000480067 NCKAP5LQ9HCH0 1330 aa16.11■□□□□ 0.17
CLDN11-205ENST00000480067 SLIT1O75093 1534 aa16.11■□□□□ 0.17
CLDN11-205ENST00000480067 ARHGAP23Q9P227 1491 aa16.1■□□□□ 0.17
CLDN11-205ENST00000480067 ZFYVE9O95405 1425 aa16.09■□□□□ 0.17
CLDN11-205ENST00000480067 MYO5BQ9ULV0 1848 aa16.08■□□□□ 0.16
CLDN11-205ENST00000480067 SCAF11Q99590 1463 aaKnown RBP16.07■□□□□ 0.16
CLDN11-205ENST00000480067 ADGRF5Q8IZF2 1346 aa16.07■□□□□ 0.16
CLDN11-205ENST00000480067 NEXMIFQ5QGS0 1516 aa16.06■□□□□ 0.16
CLDN11-205ENST00000480067 DMRT2Q9Y5R5 561 aa16.04■□□□□ 0.16
CLDN11-205ENST00000480067 PLEKHG1Q9ULL1 1385 aa16.04■□□□□ 0.16
CLDN11-205ENST00000480067 NPHP4O75161 1426 aaPredicted RBP16.02■□□□□ 0.16
CLDN11-205ENST00000480067 SLC26A8Q96RN1 970 aa16.02■□□□□ 0.16
CLDN11-205ENST00000480067 MYOM2P54296 1465 aa16.02■□□□□ 0.15
CLDN11-205ENST00000480067 MED14O60244 1454 aa16.01■□□□□ 0.15
CLDN11-205ENST00000480067 PPLO60437 1756 aa16.01■□□□□ 0.15
CLDN11-205ENST00000480067 C14orf93Q9H972 538 aaKnown RBP16■□□□□ 0.15
CLDN11-205ENST00000480067 TBX22Q9Y458 520 aa16■□□□□ 0.15
CLDN11-205ENST00000480067 CFAP70Q5T0N1 1121 aa15.99■□□□□ 0.15
CLDN11-205ENST00000480067 PIK3C2GO75747 1445 aa15.99■□□□□ 0.15
CLDN11-205ENST00000480067 NRXN1Q9ULB1 1477 aa15.98■□□□□ 0.15
CLDN11-205ENST00000480067 PRAG1Q86YV5 1406 aa15.98■□□□□ 0.15
CLDN11-205ENST00000480067 IFT172Q9UG01 1749 aa15.98■□□□□ 0.15
CLDN11-205ENST00000480067 NBPF8Q3BBV2 869 aa15.97■□□□□ 0.15
CLDN11-205ENST00000480067 POLR1AO95602 1720 aaPredicted RBP15.96■□□□□ 0.15
CLDN11-205ENST00000480067 ZEB1P37275 1124 aaPredicted RBP15.96■□□□□ 0.15
CLDN11-205ENST00000480067 STRCQ7RTU9 1775 aa15.96■□□□□ 0.15
CLDN11-205ENST00000480067 ADAMTS13Q76LX8 1427 aa15.96■□□□□ 0.14
CLDN11-205ENST00000480067 SETBP1Q9Y6X0 1596 aa15.95■□□□□ 0.14
CLDN11-205ENST00000480067 IQGAP1P46940 1657 aa15.94■□□□□ 0.14
CLDN11-205ENST00000480067 TMEM132EQ6IEE7 984 aa15.94■□□□□ 0.14
CLDN11-205ENST00000480067 ALKQ9UM73 1620 aa15.92■□□□□ 0.14
CLDN11-205ENST00000480067 NBPF1Q3BBV0 1214 aa15.92■□□□□ 0.14
CLDN11-205ENST00000480067 METP08581 1390 aa15.92■□□□□ 0.14
CLDN11-205ENST00000480067 STK26Q9P289 416 aa15.91■□□□□ 0.14
CLDN11-205ENST00000480067 ROCK2O75116 1388 aaKnown RBP15.91■□□□□ 0.14
CLDN11-205ENST00000480067 PIK3R4Q99570 1358 aa15.91■□□□□ 0.14
CLDN11-205ENST00000480067 AMOTL2Q9Y2J4 779 aa15.9■□□□□ 0.14
CLDN11-205ENST00000480067 DIP2AQ14689 1571 aa15.9■□□□□ 0.14
CLDN11-205ENST00000480067 NRXN3Q9Y4C0 1643 aa15.9■□□□□ 0.14
CLDN11-205ENST00000480067 KCNA6P17658 529 aa15.89■□□□□ 0.13
CLDN11-205ENST00000480067 CARD11Q9BXL7 1154 aa15.89■□□□□ 0.13
CLDN11-205ENST00000480067 ZNF335Q9H4Z2 1342 aaPredicted RBP15.87■□□□□ 0.13
CLDN11-205ENST00000480067 TRAK1Q9UPV9 953 aa15.87■□□□□ 0.13
CLDN11-205ENST00000480067 LAMC1P11047 1609 aa15.87■□□□□ 0.13
CLDN11-205ENST00000480067 YTHDC2Q9H6S0 1430 aaKnown RBP15.86■□□□□ 0.13
CLDN11-205ENST00000480067 LRPPRCP42704 1394 aaKnown RBP15.85■□□□□ 0.13
CLDN11-205ENST00000480067 RALGAPBQ86X10 1494 aa15.85■□□□□ 0.13
CLDN11-205ENST00000480067 ABCC11Q96J66 1382 aa15.85■□□□□ 0.13
CLDN11-205ENST00000480067 PTPRUQ92729 1446 aa15.84■□□□□ 0.13
CLDN11-205ENST00000480067 KIAA1210Q9ULL0 1709 aa15.84■□□□□ 0.13
CLDN11-205ENST00000480067 TRPM1Q7Z4N2 1603 aa15.83■□□□□ 0.13
CLDN11-205ENST00000480067 ADGRB1O14514 1584 aa15.83■□□□□ 0.13
CLDN11-205ENST00000480067 GPRASP1Q5JY77 1395 aa15.83■□□□□ 0.12
CLDN11-205ENST00000480067 PROSER2Q86WR7 435 aaPredicted RBP15.83■□□□□ 0.12
CLDN11-205ENST00000480067 SIRT1Q96EB6 747 aa15.82■□□□□ 0.12
CLDN11-205ENST00000480067 POGKQ9P215 609 aa15.82■□□□□ 0.12
CLDN11-205ENST00000480067 ASXL1Q8IXJ9 1541 aa15.82■□□□□ 0.12
CLDN11-205ENST00000480067 SETD1AO15047 1707 aaKnown RBP15.81■□□□□ 0.12
CLDN11-205ENST00000480067 PRAM1Q96QH2 718 aa15.81■□□□□ 0.12
CLDN11-205ENST00000480067 WAPLQ7Z5K2 1190 aa15.8■□□□□ 0.12
CLDN11-205ENST00000480067 ROBO2Q9HCK4 1378 aa15.79■□□□□ 0.12
CLDN11-205ENST00000480067 RBM33Q96EV2 1170 aaKnown RBP15.79■□□□□ 0.12
CLDN11-205ENST00000480067 TECPR2O15040 1411 aa15.78■□□□□ 0.12
CLDN11-205ENST00000480067 CHD2O14647 1828 aaKnown RBP15.78■□□□□ 0.12
CLDN11-205ENST00000480067 EIF3AQ14152 1382 aaKnown RBP15.78■□□□□ 0.12
CLDN11-205ENST00000480067 SAFB2Q14151 953 aaKnown RBP eCLIP15.78■□□□□ 0.12
CLDN11-205ENST00000480067 C14orf37Q86TY3 774 aa15.78■□□□□ 0.12
CLDN11-205ENST00000480067 EIF4G2P78344 907 aaKnown RBP eCLIP15.77■□□□□ 0.11
CLDN11-205ENST00000480067 PTCH1Q13635 1447 aa15.77■□□□□ 0.11
CLDN11-205ENST00000480067 FAM135BQ49AJ0 1406 aa15.77■□□□□ 0.11
CLDN11-205ENST00000480067 NKTRP30414 1462 aaKnown RBP15.77■□□□□ 0.11
CLDN11-205ENST00000480067 USP47Q96K76 1375 aa15.76■□□□□ 0.11
CLDN11-205ENST00000480067 CENPJQ9HC77 1338 aaPredicted RBP15.76■□□□□ 0.11
CLDN11-205ENST00000480067 NWD1Q149M9 1564 aa15.75■□□□□ 0.11
CLDN11-205ENST00000480067 ST20-MTHFSA0A0A6YYL1 179 aa15.75■□□□□ 0.11
CLDN11-205ENST00000480067 CPS1P31327 1500 aa15.75■□□□□ 0.11
CLDN11-205ENST00000480067 TMEM94Q12767 1356 aa15.75■□□□□ 0.11
CLDN11-205ENST00000480067 DLC1Q96QB1 1528 aa15.74■□□□□ 0.11
CLDN11-205ENST00000480067 XRN1Q8IZH2 1706 aaKnown RBP15.74■□□□□ 0.11
CLDN11-205ENST00000480067 PLEKHH1Q9ULM0 1364 aa15.74■□□□□ 0.11
CLDN11-205ENST00000480067 LRRC7Q96NW7 1537 aa15.72■□□□□ 0.11
CLDN11-205ENST00000480067 HSPA5P11021 654 aaKnown RBP15.72■□□□□ 0.11
CLDN11-205ENST00000480067 C19orf44Q9H6X5 657 aa15.72■□□□□ 0.11
CLDN11-205ENST00000480067 MINK1Q8N4C8 1332 aaPredicted RBP15.72■□□□□ 0.11
CLDN11-205ENST00000480067 STRCP1A6NGW2 1772 aa15.72■□□□□ 0.11
CLDN11-205ENST00000480067 NCOA3Q9Y6Q9 1424 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms