RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 PRDM11Q9NQV5 511 aa7.81□□□□□ -1.16
CPS1-207ENST00000479988 SUPT16HQ9Y5B9 1047 aaKnown RBP7.81□□□□□ -1.16
CPS1-207ENST00000479988 KDM6BO15054 1643 aa7.8□□□□□ -1.16
CPS1-207ENST00000479988 RALBP1Q15311 655 aa7.8□□□□□ -1.16
CPS1-207ENST00000479988 UHRF1BP1LA0JNW5 1464 aa7.8□□□□□ -1.16
CPS1-207ENST00000479988 DNMT1P26358 1616 aaKnown RBP7.8□□□□□ -1.16
CPS1-207ENST00000479988 SHANK2Q9UPX8 1470 aa7.8□□□□□ -1.16
CPS1-207ENST00000479988 ZNF330Q9Y3S2 320 aaPredicted RBP7.8□□□□□ -1.16
CPS1-207ENST00000479988 CENPJQ9HC77 1338 aaPredicted RBP7.8□□□□□ -1.16
CPS1-207ENST00000479988 ADGRL2O95490 1459 aa7.79□□□□□ -1.16
CPS1-207ENST00000479988 NLRP6P59044 892 aa7.79□□□□□ -1.16
CPS1-207ENST00000479988 SYTL4Q96C24 671 aaPredicted RBP7.79□□□□□ -1.16
CPS1-207ENST00000479988 MAGI3Q5TCQ9 1506 aa7.79□□□□□ -1.16
CPS1-207ENST00000479988 ZMYM3Q14202 1370 aa7.79□□□□□ -1.16
CPS1-207ENST00000479988 USP47Q96K76 1375 aa7.79□□□□□ -1.16
CPS1-207ENST00000479988 NCKAP5LQ9HCH0 1330 aa7.79□□□□□ -1.16
CPS1-207ENST00000479988 PDE3BQ13370 1112 aa7.79□□□□□ -1.16
CPS1-207ENST00000479988 PRKRIP1Q9H875 184 aaPredicted RBP7.79□□□□□ -1.16
CPS1-207ENST00000479988 LRPPRCP42704 1394 aaKnown RBP7.79□□□□□ -1.16
CPS1-207ENST00000479988 ADAMTS2O95450 1211 aa7.79□□□□□ -1.16
CPS1-207ENST00000479988 IDI1Q13907 227 aa7.79□□□□□ -1.16
CPS1-207ENST00000479988 TMEM132EQ6IEE7 984 aa7.79□□□□□ -1.16
CPS1-207ENST00000479988 STRN4Q9NRL3 753 aa7.79□□□□□ -1.16
CPS1-207ENST00000479988 USP35Q9P2H5 1018 aa7.79□□□□□ -1.16
CPS1-207ENST00000479988 AMOTL2Q9Y2J4 779 aa7.79□□□□□ -1.16
CPS1-207ENST00000479988 CHMP4AQ9BY43 222 aa7.78□□□□□ -1.16
CPS1-207ENST00000479988 RIMBP3CA6NJZ7 1639 aa7.78□□□□□ -1.16
CPS1-207ENST00000479988 RIMBP3BA6NNM3 1639 aa7.78□□□□□ -1.16
CPS1-207ENST00000479988 RIMBP3Q9UFD9 1639 aa7.78□□□□□ -1.16
CPS1-207ENST00000479988 GCC2Q8IWJ2 1684 aa7.78□□□□□ -1.16
CPS1-207ENST00000479988 NLRP13Q86W25 1043 aa7.78□□□□□ -1.16
CPS1-207ENST00000479988 ABTB2Q8N961 1025 aa7.78□□□□□ -1.16
CPS1-207ENST00000479988 RAPGEF4Q8WZA2 1011 aa7.78□□□□□ -1.16
CPS1-207ENST00000479988 NLRP2Q9NX02 1062 aa7.78□□□□□ -1.16
CPS1-207ENST00000479988 WASHC2AQ641Q2 1341 aa7.78□□□□□ -1.16
CPS1-207ENST00000479988 KTN1Q86UP2 1357 aaKnown RBP7.78□□□□□ -1.16
CPS1-207ENST00000479988 SALL2Q9Y467 1007 aaPredicted RBP7.77□□□□□ -1.16
CPS1-207ENST00000479988 PMFBP1Q8TBY8 1022 aa7.77□□□□□ -1.17
CPS1-207ENST00000479988 CC2D1BQ5T0F9 858 aaKnown RBP7.77□□□□□ -1.17
CPS1-207ENST00000479988 PRAM1Q96QH2 718 aa7.77□□□□□ -1.17
CPS1-207ENST00000479988 GTF2E1P29083 439 aaPredicted RBP7.76□□□□□ -1.17
CPS1-207ENST00000479988 C1orf141Q5JVX7 400 aa7.76□□□□□ -1.17
CPS1-207ENST00000479988 LAS1LQ9Y4W2 734 aaKnown RBP7.76□□□□□ -1.17
CPS1-207ENST00000479988 ZFYVE16Q7Z3T8 1539 aa7.76□□□□□ -1.17
CPS1-207ENST00000479988 KDM5BQ9UGL1 1544 aa7.76□□□□□ -1.17
CPS1-207ENST00000479988 ERBINQ96RT1 1412 aa7.76□□□□□ -1.17
CPS1-207ENST00000479988 NBPF8Q3BBV2 869 aa7.76□□□□□ -1.17
CPS1-207ENST00000479988 KIF7Q2M1P5 1343 aa7.76□□□□□ -1.17
CPS1-207ENST00000479988 TSPOAP1O95153 1857 aa7.76□□□□□ -1.17
CPS1-207ENST00000479988 CFAP70Q5T0N1 1121 aa7.75□□□□□ -1.17
CPS1-207ENST00000479988 ABCA8O94911 1581 aa7.75□□□□□ -1.17
CPS1-207ENST00000479988 NUTM2GQ5VZR2 741 aa7.75□□□□□ -1.17
CPS1-207ENST00000479988 TRAPPC8Q9Y2L5 1435 aa7.75□□□□□ -1.17
CPS1-207ENST00000479988 NEUROD2Q15784 382 aa7.74□□□□□ -1.17
CPS1-207ENST00000479988 TOM1L2Q6ZVM7 507 aa7.74□□□□□ -1.17
CPS1-207ENST00000479988 CFAP74Q9C0B2 1584 aa7.74□□□□□ -1.17
CPS1-207ENST00000479988 ST20-MTHFSA0A0A6YYL1 179 aa7.74□□□□□ -1.17
CPS1-207ENST00000479988 RBM33Q96EV2 1170 aaKnown RBP7.74□□□□□ -1.17
CPS1-207ENST00000479988 PPP4R2Q9NY27 417 aa7.74□□□□□ -1.17
CPS1-207ENST00000479988 MAGI2Q86UL8 1455 aa7.74□□□□□ -1.17
CPS1-207ENST00000479988 C19orf44Q9H6X5 657 aa7.73□□□□□ -1.17
CPS1-207ENST00000479988 CGNL1Q0VF96 1302 aa7.73□□□□□ -1.17
CPS1-207ENST00000479988 XPCQ01831 940 aaPredicted RBP7.73□□□□□ -1.17
CPS1-207ENST00000479988 SYCP2Q9BX26 1530 aa7.73□□□□□ -1.17
CPS1-207ENST00000479988 ZBED9Q6R2W3 1325 aa7.73□□□□□ -1.17
CPS1-207ENST00000479988 NPHP3Q7Z494 1330 aa7.72□□□□□ -1.17
CPS1-207ENST00000479988 FOXO3O43524 673 aa7.72□□□□□ -1.17
CPS1-207ENST00000479988 ZNF692Q9BU19 519 aaPredicted RBP7.72□□□□□ -1.17
CPS1-207ENST00000479988 U2AF1L5P0DN76 240 aaPredicted RBP7.72□□□□□ -1.17
CPS1-207ENST00000479988 U2AF1Q01081 240 aaKnown RBP eCLIP7.72□□□□□ -1.17
CPS1-207ENST00000479988 PHF8Q9UPP1 1060 aa7.72□□□□□ -1.17
CPS1-207ENST00000479988 RTEL1-TNFRSF6BF6WH68 1400 aa7.72□□□□□ -1.17
CPS1-207ENST00000479988 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.72□□□□□ -1.17
CPS1-207ENST00000479988 LRRC59Q96AG4 307 aaKnown RBP7.72□□□□□ -1.17
CPS1-207ENST00000479988 MYH16Q9H6N6 1097 aa7.72□□□□□ -1.17
CPS1-207ENST00000479988 PPP1R1BQ9UD71 204 aaPredicted RBP7.72□□□□□ -1.17
CPS1-207ENST00000479988 ARHGEF5Q12774 1597 aa7.71□□□□□ -1.17
CPS1-207ENST00000479988 CALD1Q05682 793 aaKnown RBP7.71□□□□□ -1.17
CPS1-207ENST00000479988 GOLGA2Q08379 1002 aa7.71□□□□□ -1.17
CPS1-207ENST00000479988 MYBBP1AQ9BQG0 1328 aaKnown RBP7.71□□□□□ -1.17
CPS1-207ENST00000479988 TTC5Q8N0Z6 440 aa7.71□□□□□ -1.18
CPS1-207ENST00000479988 ADCY10Q96PN6 1610 aa7.71□□□□□ -1.18
CPS1-207ENST00000479988 G3V3G9 751 aa7.71□□□□□ -1.18
CPS1-207ENST00000479988 TEFQ10587 303 aa7.71□□□□□ -1.18
CPS1-207ENST00000479988 DCAF8Q5TAQ9 597 aa7.71□□□□□ -1.18
CPS1-207ENST00000479988 ARHGEF12Q9NZN5 1544 aa7.71□□□□□ -1.18
CPS1-207ENST00000479988 ADGBQ8N7X0 1667 aa7.71□□□□□ -1.18
CPS1-207ENST00000479988 C8orf37Q96NL8 207 aa7.71□□□□□ -1.18
CPS1-207ENST00000479988 PZPP20742 1482 aa7.7□□□□□ -1.18
CPS1-207ENST00000479988 CABP2Q9NPB3 220 aa7.7□□□□□ -1.18
CPS1-207ENST00000479988 DUOX2Q9NRD8 1548 aa7.69□□□□□ -1.18
CPS1-207ENST00000479988 KCNA6P17658 529 aa7.69□□□□□ -1.18
CPS1-207ENST00000479988 CCDC61Q9Y6R9 512 aa7.69□□□□□ -1.18
CPS1-207ENST00000479988 KCNH5Q8NCM2 988 aa7.69□□□□□ -1.18
CPS1-207ENST00000479988 CCDC136Q96JN2 1154 aa7.69□□□□□ -1.18
CPS1-207ENST00000479988 CLASP1Q7Z460 1538 aa7.69□□□□□ -1.18
CPS1-207ENST00000479988 CDK19Q9BWU1 502 aa7.69□□□□□ -1.18
CPS1-207ENST00000479988 BRD4O60885 1362 aaPredicted RBP7.69□□□□□ -1.18
CPS1-207ENST00000479988 ZC3H6P61129 1189 aaKnown RBP7.68□□□□□ -1.18
CPS1-207ENST00000479988 LMOD3Q0VAK6 560 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms