RNA–Protein interactions for RNA: ENST00000479933.2

TNFRSF8-204, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-204ENST00000479933 KIF1BO60333 1816 aa25.67■■□□□ 1.7
TNFRSF8-204ENST00000479933 PANK3Q9H999 370 aa25.66■■□□□ 1.7
TNFRSF8-204ENST00000479933 EIF3AQ14152 1382 aaKnown RBP25.65■■□□□ 1.7
TNFRSF8-204ENST00000479933 MYOM2P54296 1465 aa25.65■■□□□ 1.7
TNFRSF8-204ENST00000479933 SYNMO15061 1565 aa25.62■■□□□ 1.69
TNFRSF8-204ENST00000479933 SLC24A1O60721 1099 aa25.62■■□□□ 1.69
TNFRSF8-204ENST00000479933 MAP3K4Q9Y6R4 1608 aa25.62■■□□□ 1.69
TNFRSF8-204ENST00000479933 PPRC1Q5VV67 1664 aaKnown RBP25.6■■□□□ 1.69
TNFRSF8-204ENST00000479933 CD109Q6YHK3 1445 aa25.6■■□□□ 1.69
TNFRSF8-204ENST00000479933 IFT172Q9UG01 1749 aa25.6■■□□□ 1.69
TNFRSF8-204ENST00000479933 POGZQ7Z3K3 1410 aa25.6■■□□□ 1.69
TNFRSF8-204ENST00000479933 MLH3Q9UHC1 1453 aa25.6■■□□□ 1.69
TNFRSF8-204ENST00000479933 PDE3BQ13370 1112 aa25.59■■□□□ 1.69
TNFRSF8-204ENST00000479933 CC2D1BQ5T0F9 858 aaKnown RBP25.57■■□□□ 1.68
TNFRSF8-204ENST00000479933 HECW2Q9P2P5 1572 aa25.56■■□□□ 1.68
TNFRSF8-204ENST00000479933 ABCA6Q8N139 1617 aa25.55■■□□□ 1.68
TNFRSF8-204ENST00000479933 KDM5AP29375 1690 aaKnown RBP25.54■■□□□ 1.68
TNFRSF8-204ENST00000479933 BLMP54132 1417 aaPredicted RBP25.53■■□□□ 1.68
TNFRSF8-204ENST00000479933 KNSTRNQ9Y448 316 aa25.53■■□□□ 1.68
TNFRSF8-204ENST00000479933 UGGT1Q9NYU2 1555 aa25.52■■□□□ 1.68
TNFRSF8-204ENST00000479933 NRXN1Q9ULB1 1477 aa25.52■■□□□ 1.68
TNFRSF8-204ENST00000479933 MROH2AA6NES4 1674 aa25.5■■□□□ 1.67
TNFRSF8-204ENST00000479933 B4GALNT3Q6L9W6 998 aa25.5■■□□□ 1.67
TNFRSF8-204ENST00000479933 MYOM1P52179 1685 aa25.5■■□□□ 1.67
TNFRSF8-204ENST00000479933 ADGRB3O60242 1522 aa25.5■■□□□ 1.67
TNFRSF8-204ENST00000479933 NEO1Q92859 1461 aa25.5■■□□□ 1.67
TNFRSF8-204ENST00000479933 NPC1L1Q9UHC9 1359 aa25.49■■□□□ 1.67
TNFRSF8-204ENST00000479933 FRMPD1Q5SYB0 1578 aa25.49■■□□□ 1.67
TNFRSF8-204ENST00000479933 ASXL1Q8IXJ9 1541 aa25.48■■□□□ 1.67
TNFRSF8-204ENST00000479933 MYO3AQ8NEV4 1616 aa25.46■■□□□ 1.67
TNFRSF8-204ENST00000479933 SETBP1Q9Y6X0 1596 aa25.46■■□□□ 1.67
TNFRSF8-204ENST00000479933 ADGRF5Q8IZF2 1346 aa25.44■■□□□ 1.66
TNFRSF8-204ENST00000479933 AMER1Q5JTC6 1135 aaPredicted RBP25.44■■□□□ 1.66
TNFRSF8-204ENST00000479933 CFAP70Q5T0N1 1121 aa25.43■■□□□ 1.66
TNFRSF8-204ENST00000479933 NPATQ14207 1427 aa25.42■■□□□ 1.66
TNFRSF8-204ENST00000479933 ANO8Q9HCE9 1232 aaPredicted RBP25.42■■□□□ 1.66
TNFRSF8-204ENST00000479933 SBNO2Q9Y2G9 1366 aa25.42■■□□□ 1.66
TNFRSF8-204ENST00000479933 PPLO60437 1756 aa25.42■■□□□ 1.66
TNFRSF8-204ENST00000479933 PIK3C2GO75747 1445 aa25.41■■□□□ 1.66
TNFRSF8-204ENST00000479933 PPP2R1AP30153 589 aa25.4■■□□□ 1.66
TNFRSF8-204ENST00000479933 RCAN3Q9UKA8 241 aa25.4■■□□□ 1.66
TNFRSF8-204ENST00000479933 ABCC3O15438 1527 aa25.4■■□□□ 1.66
TNFRSF8-204ENST00000479933 SENP3-EIF4A1A0A087X0R7 540 aa25.4■■□□□ 1.66
TNFRSF8-204ENST00000479933 ERVK-7P63135 1459 aa25.4■■□□□ 1.66
TNFRSF8-204ENST00000479933 RPGRIP1LQ68CZ1 1315 aa25.39■■□□□ 1.66
TNFRSF8-204ENST00000479933 CCDC136Q96JN2 1154 aa25.39■■□□□ 1.66
TNFRSF8-204ENST00000479933 RRP1P56182 461 aaKnown RBP25.39■■□□□ 1.65
TNFRSF8-204ENST00000479933 NOS1P29475 1434 aa25.38■■□□□ 1.65
TNFRSF8-204ENST00000479933 CAMSAP1Q5T5Y3 1602 aa25.38■■□□□ 1.65
TNFRSF8-204ENST00000479933 NOP58Q9Y2X3 529 aaKnown RBP25.36■■□□□ 1.65
TNFRSF8-204ENST00000479933 GGT6Q6P531 493 aa25.36■■□□□ 1.65
TNFRSF8-204ENST00000479933 WDR43Q15061 677 aaKnown RBP eCLIP25.34■■□□□ 1.65
TNFRSF8-204ENST00000479933 SALL2Q9Y467 1007 aaPredicted RBP25.34■■□□□ 1.65
TNFRSF8-204ENST00000479933 DIP2CQ9Y2E4 1556 aa25.33■■□□□ 1.65
TNFRSF8-204ENST00000479933 ZC3H13Q5T200 1668 aaKnown RBP25.33■■□□□ 1.65
TNFRSF8-204ENST00000479933 CFAP65Q6ZU64 1925 aaKnown RBP25.32■■□□□ 1.64
TNFRSF8-204ENST00000479933 CHGAP10645 457 aaKnown RBP25.31■■□□□ 1.64
TNFRSF8-204ENST00000479933 ADAMTS8Q9UP79 889 aa25.31■■□□□ 1.64
TNFRSF8-204ENST00000479933 RICTORQ6R327 1708 aa25.31■■□□□ 1.64
TNFRSF8-204ENST00000479933 C14orf93Q9H972 538 aaKnown RBP25.31■■□□□ 1.64
TNFRSF8-204ENST00000479933 CENPJQ9HC77 1338 aaPredicted RBP25.31■■□□□ 1.64
TNFRSF8-204ENST00000479933 PIK3C2BO00750 1634 aa25.3■■□□□ 1.64
TNFRSF8-204ENST00000479933 ARHGAP31Q2M1Z3 1444 aa25.29■■□□□ 1.64
TNFRSF8-204ENST00000479933 ADGRB1O14514 1584 aa25.28■■□□□ 1.64
TNFRSF8-204ENST00000479933 CDCA7LQ96GN5 454 aa25.27■■□□□ 1.64
TNFRSF8-204ENST00000479933 QRICH2Q9H0J4 1663 aa25.27■■□□□ 1.64
TNFRSF8-204ENST00000479933 SIGLEC1Q9BZZ2 1709 aa25.26■■□□□ 1.63
TNFRSF8-204ENST00000479933 GLI2P10070 1586 aa25.25■■□□□ 1.63
TNFRSF8-204ENST00000479933 RAPGEF3O95398 923 aa25.25■■□□□ 1.63
TNFRSF8-204ENST00000479933 VGFO15240 615 aaPredicted RBP25.21■■□□□ 1.63
TNFRSF8-204ENST00000479933 NEXMIFQ5QGS0 1516 aa25.19■■□□□ 1.62
TNFRSF8-204ENST00000479933 EXOC6Q8TAG9 804 aa25.19■■□□□ 1.62
TNFRSF8-204ENST00000479933 PUS7Q96PZ0 661 aaKnown RBP25.19■■□□□ 1.62
TNFRSF8-204ENST00000479933 CARD14Q9BXL6 1004 aa25.19■■□□□ 1.62
TNFRSF8-204ENST00000479933 UBE2Q2Q8WVN8 375 aa25.18■■□□□ 1.62
TNFRSF8-204ENST00000479933 NGEFQ8N5V2 710 aa25.18■■□□□ 1.62
TNFRSF8-204ENST00000479933 TRAK1Q9UPV9 953 aa25.18■■□□□ 1.62
TNFRSF8-204ENST00000479933 ZNF521Q96K83 1311 aa25.17■■□□□ 1.62
TNFRSF8-204ENST00000479933 USP32Q8NFA0 1604 aa25.17■■□□□ 1.62
TNFRSF8-204ENST00000479933 ZFYVE9O95405 1425 aa25.16■■□□□ 1.62
TNFRSF8-204ENST00000479933 PLEKHH1Q9ULM0 1364 aa25.16■■□□□ 1.62
TNFRSF8-204ENST00000479933 GOLGA2Q08379 1002 aa25.15■■□□□ 1.62
TNFRSF8-204ENST00000479933 SLC52A1Q9NWF4 448 aa25.15■■□□□ 1.62
TNFRSF8-204ENST00000479933 ARHGEF28Q8N1W1 1705 aaKnown RBP25.13■■□□□ 1.61
TNFRSF8-204ENST00000479933 POLR3AO14802 1390 aaPredicted RBP25.13■■□□□ 1.61
TNFRSF8-204ENST00000479933 YEATS2Q9ULM3 1422 aa25.11■■□□□ 1.61
TNFRSF8-204ENST00000479933 PAK3O75914 559 aaPredicted RBP25.11■■□□□ 1.61
TNFRSF8-204ENST00000479933 NBR1Q14596 966 aa25.11■■□□□ 1.61
TNFRSF8-204ENST00000479933 RTL5Q5HYW3 569 aaPredicted RBP25.11■■□□□ 1.61
TNFRSF8-204ENST00000479933 PREX1Q8TCU6 1659 aa25.11■■□□□ 1.61
TNFRSF8-204ENST00000479933 DUSP27Q5VZP5 1158 aa25.1■■□□□ 1.61
TNFRSF8-204ENST00000479933 NSD3Q9BZ95 1437 aa25.1■■□□□ 1.61
TNFRSF8-204ENST00000479933 TMEM132EQ6IEE7 984 aa25.1■■□□□ 1.61
TNFRSF8-204ENST00000479933 EVC2Q86UK5 1308 aa25.09■■□□□ 1.61
TNFRSF8-204ENST00000479933 SLFN5Q08AF3 891 aa25.07■■□□□ 1.6
TNFRSF8-204ENST00000479933 IDI1Q13907 227 aa25.06■■□□□ 1.6
TNFRSF8-204ENST00000479933 MORC1Q86VD1 984 aa25.06■■□□□ 1.6
TNFRSF8-204ENST00000479933 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.06■■□□□ 1.6
TNFRSF8-204ENST00000479933 TMEM131LA2VDJ0 1609 aa25.05■■□□□ 1.6
TNFRSF8-204ENST00000479933 TCERG1O14776 1098 aaKnown RBP25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms