RNA–Protein interactions for RNA: ENST00000479335.5

RAD51B-208, Transcript of RAD51 paralog B, humanhuman

TSL 1 (best)

Gene RAD51B, Length 1,615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-208ENST00000479335 NRXN1Q9ULB1 1477 aa13.63□□□□□ -0.23
RAD51B-208ENST00000479335 COL17A1Q9UMD9 1497 aaPredicted RBP13.63□□□□□ -0.23
RAD51B-208ENST00000479335 SLC24A1O60721 1099 aa13.62□□□□□ -0.23
RAD51B-208ENST00000479335 ARHGEF40Q8TER5 1519 aa13.61□□□□□ -0.23
RAD51B-208ENST00000479335 SIGLEC1Q9BZZ2 1709 aa13.61□□□□□ -0.23
RAD51B-208ENST00000479335 CFAP65Q6ZU64 1925 aaKnown RBP13.61□□□□□ -0.23
RAD51B-208ENST00000479335 MROH2AA6NES4 1674 aa13.6□□□□□ -0.23
RAD51B-208ENST00000479335 SYNMO15061 1565 aa13.6□□□□□ -0.23
RAD51B-208ENST00000479335 SCAF11Q99590 1463 aaKnown RBP13.6□□□□□ -0.23
RAD51B-208ENST00000479335 TESK2Q96S53 571 aa13.6□□□□□ -0.23
RAD51B-208ENST00000479335 IQGAP1P46940 1657 aa13.59□□□□□ -0.23
RAD51B-208ENST00000479335 PRKRIP1Q9H875 184 aaPredicted RBP13.59□□□□□ -0.23
RAD51B-208ENST00000479335 PPLO60437 1756 aa13.58□□□□□ -0.24
RAD51B-208ENST00000479335 PREX1Q8TCU6 1659 aa13.58□□□□□ -0.24
RAD51B-208ENST00000479335 EIF3AQ14152 1382 aaKnown RBP13.58□□□□□ -0.24
RAD51B-208ENST00000479335 TMF1P82094 1093 aa13.57□□□□□ -0.24
RAD51B-208ENST00000479335 ADGRF5Q8IZF2 1346 aa13.57□□□□□ -0.24
RAD51B-208ENST00000479335 SETBP1Q9Y6X0 1596 aa13.57□□□□□ -0.24
RAD51B-208ENST00000479335 CHGAP10645 457 aaKnown RBP13.57□□□□□ -0.24
RAD51B-208ENST00000479335 ZFYVE9O95405 1425 aa13.56□□□□□ -0.24
RAD51B-208ENST00000479335 VGFO15240 615 aaPredicted RBP13.56□□□□□ -0.24
RAD51B-208ENST00000479335 IDI1Q13907 227 aa13.56□□□□□ -0.24
RAD51B-208ENST00000479335 CDCA8Q53HL2 280 aa13.56□□□□□ -0.24
RAD51B-208ENST00000479335 TRHP20396 242 aaPredicted RBP13.55□□□□□ -0.24
RAD51B-208ENST00000479335 C14orf93Q9H972 538 aaKnown RBP13.55□□□□□ -0.24
RAD51B-208ENST00000479335 KTN1Q86UP2 1357 aaKnown RBP13.55□□□□□ -0.24
RAD51B-208ENST00000479335 CFAP70Q5T0N1 1121 aa13.54□□□□□ -0.24
RAD51B-208ENST00000479335 PIK3C2GO75747 1445 aa13.54□□□□□ -0.24
RAD51B-208ENST00000479335 ERVK-7P63135 1459 aa13.54□□□□□ -0.24
RAD51B-208ENST00000479335 POLR3GLQ9BT43 218 aa13.53□□□□□ -0.24
RAD51B-208ENST00000479335 NEXMIFQ5QGS0 1516 aa13.52□□□□□ -0.25
RAD51B-208ENST00000479335 TMEM131LA2VDJ0 1609 aa13.52□□□□□ -0.25
RAD51B-208ENST00000479335 SPATA31D1Q6ZQQ2 1576 aa13.52□□□□□ -0.25
RAD51B-208ENST00000479335 CLTCQ00610 1675 aaKnown RBP13.52□□□□□ -0.25
RAD51B-208ENST00000479335 DISP3Q9P2K9 1392 aa13.51□□□□□ -0.25
RAD51B-208ENST00000479335 SBNO2Q9Y2G9 1366 aa13.5□□□□□ -0.25
RAD51B-208ENST00000479335 ESF1Q9H501 851 aaKnown RBP13.5□□□□□ -0.25
RAD51B-208ENST00000479335 MYO3AQ8NEV4 1616 aa13.49□□□□□ -0.25
RAD51B-208ENST00000479335 RALBP1Q15311 655 aa13.49□□□□□ -0.25
RAD51B-208ENST00000479335 FBXO31Q5XUX0 539 aaPredicted RBP13.49□□□□□ -0.25
RAD51B-208ENST00000479335 ADGRB1O14514 1584 aa13.48□□□□□ -0.25
RAD51B-208ENST00000479335 ZMYM3Q14202 1370 aa13.47□□□□□ -0.25
RAD51B-208ENST00000479335 PER1O15534 1290 aaPredicted RBP13.47□□□□□ -0.25
RAD51B-208ENST00000479335 MLECQ14165 292 aa13.46□□□□□ -0.25
RAD51B-208ENST00000479335 SCAF1Q9H7N4 1312 aaKnown RBP13.46□□□□□ -0.25
RAD51B-208ENST00000479335 MRS2Q9HD23 443 aa13.45□□□□□ -0.26
RAD51B-208ENST00000479335 MYO5BQ9ULV0 1848 aa13.45□□□□□ -0.26
RAD51B-208ENST00000479335 PUS7Q96PZ0 661 aaKnown RBP13.44□□□□□ -0.26
RAD51B-208ENST00000479335 STAG3Q9UJ98 1225 aa13.44□□□□□ -0.26
RAD51B-208ENST00000479335 CENPJQ9HC77 1338 aaPredicted RBP13.44□□□□□ -0.26
RAD51B-208ENST00000479335 PPP4R3CPQ6ZMV5 832 aa13.43□□□□□ -0.26
RAD51B-208ENST00000479335 PANK3Q9H999 370 aa13.43□□□□□ -0.26
RAD51B-208ENST00000479335 A2ML1A8K2U0 1454 aa13.43□□□□□ -0.26
RAD51B-208ENST00000479335 KDM5AP29375 1690 aaKnown RBP13.43□□□□□ -0.26
RAD51B-208ENST00000479335 GTF3C3Q9Y5Q9 886 aa13.42□□□□□ -0.26
RAD51B-208ENST00000479335 MYBBP1AQ9BQG0 1328 aaKnown RBP13.42□□□□□ -0.26
RAD51B-208ENST00000479335 PARD3Q8TEW0 1356 aa13.42□□□□□ -0.26
RAD51B-208ENST00000479335 HDGFP51858 240 aaKnown RBP13.41□□□□□ -0.26
RAD51B-208ENST00000479335 CCDC184Q52MB2 194 aa13.41□□□□□ -0.26
RAD51B-208ENST00000479335 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.41□□□□□ -0.26
RAD51B-208ENST00000479335 BRD4O60885 1362 aaPredicted RBP13.41□□□□□ -0.26
RAD51B-208ENST00000479335 TRAK1Q9UPV9 953 aa13.4□□□□□ -0.26
RAD51B-208ENST00000479335 NPC1L1Q9UHC9 1359 aa13.39□□□□□ -0.27
RAD51B-208ENST00000479335 TMEM132EQ6IEE7 984 aa13.39□□□□□ -0.27
RAD51B-208ENST00000479335 TNRQ92752 1358 aa13.39□□□□□ -0.27
RAD51B-208ENST00000479335 RIMS2Q9UQ26 1411 aa13.38□□□□□ -0.27
RAD51B-208ENST00000479335 NUTM2DQ5VT03 806 aaPredicted RBP13.38□□□□□ -0.27
RAD51B-208ENST00000479335 TMC1Q8TDI8 760 aa13.38□□□□□ -0.27
RAD51B-208ENST00000479335 KNSTRNQ9Y448 316 aa13.38□□□□□ -0.27
RAD51B-208ENST00000479335 QRICH2Q9H0J4 1663 aa13.37□□□□□ -0.27
RAD51B-208ENST00000479335 NLRP13Q86W25 1043 aa13.37□□□□□ -0.27
RAD51B-208ENST00000479335 ARHGEF28Q8N1W1 1705 aaKnown RBP13.37□□□□□ -0.27
RAD51B-208ENST00000479335 MYOM1P52179 1685 aa13.37□□□□□ -0.27
RAD51B-208ENST00000479335 ALKQ9UM73 1620 aa13.37□□□□□ -0.27
RAD51B-208ENST00000479335 HNRNPUQ00839 825 aaKnown RBP eCLIP13.36□□□□□ -0.27
RAD51B-208ENST00000479335 PNISRQ8TF01 805 aaKnown RBP13.36□□□□□ -0.27
RAD51B-208ENST00000479335 NLRP1Q9C000 1473 aa13.35□□□□□ -0.27
RAD51B-208ENST00000479335 FAM9BQ8IZU0 186 aa13.35□□□□□ -0.27
RAD51B-208ENST00000479335 ASXL1Q8IXJ9 1541 aa13.35□□□□□ -0.27
RAD51B-208ENST00000479335 EVC2Q86UK5 1308 aa13.35□□□□□ -0.27
RAD51B-208ENST00000479335 YTHDC2Q9H6S0 1430 aaKnown RBP13.35□□□□□ -0.27
RAD51B-208ENST00000479335 AMER1Q5JTC6 1135 aaPredicted RBP13.34□□□□□ -0.27
RAD51B-208ENST00000479335 INSRP06213 1382 aa13.33□□□□□ -0.28
RAD51B-208ENST00000479335 DLC1Q96QB1 1528 aa13.32□□□□□ -0.28
RAD51B-208ENST00000479335 LRPPRCP42704 1394 aaKnown RBP13.32□□□□□ -0.28
RAD51B-208ENST00000479335 ZBED9Q6R2W3 1325 aa13.32□□□□□ -0.28
RAD51B-208ENST00000479335 UBR1Q8IWV7 1749 aa13.32□□□□□ -0.28
RAD51B-208ENST00000479335 TMEM2Q9UHN6 1383 aa13.31□□□□□ -0.28
RAD51B-208ENST00000479335 PTPRMP28827 1452 aa13.31□□□□□ -0.28
RAD51B-208ENST00000479335 CC2D1BQ5T0F9 858 aaKnown RBP13.31□□□□□ -0.28
RAD51B-208ENST00000479335 SIRT1Q96EB6 747 aa13.31□□□□□ -0.28
RAD51B-208ENST00000479335 ABCC11Q96J66 1382 aa13.31□□□□□ -0.28
RAD51B-208ENST00000479335 FER1L4A9Z1Z3 1794 aa13.3□□□□□ -0.28
RAD51B-208ENST00000479335 NINLQ9Y2I6 1382 aa13.3□□□□□ -0.28
RAD51B-208ENST00000479335 CNGB1Q14028 1251 aaPredicted RBP13.3□□□□□ -0.28
RAD51B-208ENST00000479335 SETD1AO15047 1707 aaKnown RBP13.3□□□□□ -0.28
RAD51B-208ENST00000479335 C3P01024 1663 aa13.29□□□□□ -0.28
RAD51B-208ENST00000479335 TULP4Q9NRJ4 1543 aa13.28□□□□□ -0.28
RAD51B-208ENST00000479335 POGKQ9P215 609 aa13.28□□□□□ -0.28
RAD51B-208ENST00000479335 STK26Q9P289 416 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms