RNA–Protein interactions for RNA: ENST00000479029.1

PHF1-207, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 933 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-207ENST00000479029 PROSER2Q86WR7 435 aaPredicted RBP25.28■■□□□ 1.64
PHF1-207ENST00000479029 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.28■■□□□ 1.64
PHF1-207ENST00000479029 ZFYVE9O95405 1425 aa25.28■■□□□ 1.64
PHF1-207ENST00000479029 RIMS2Q9UQ26 1411 aa25.28■■□□□ 1.64
PHF1-207ENST00000479029 IQGAP3Q86VI3 1631 aa25.27■■□□□ 1.64
PHF1-207ENST00000479029 SENP3Q9H4L4 574 aaPredicted RBP25.27■■□□□ 1.64
PHF1-207ENST00000479029 TMEM94Q12767 1356 aa25.27■■□□□ 1.64
PHF1-207ENST00000479029 PLEKHG1Q9ULL1 1385 aa25.26■■□□□ 1.63
PHF1-207ENST00000479029 E9PCH4 1651 aa25.25■■□□□ 1.63
PHF1-207ENST00000479029 TMEM131LA2VDJ0 1609 aa25.24■■□□□ 1.63
PHF1-207ENST00000479029 RRBP1Q9P2E9 1410 aaKnown RBP25.23■■□□□ 1.63
PHF1-207ENST00000479029 SOCS7O14512 581 aa25.23■■□□□ 1.63
PHF1-207ENST00000479029 RBM33Q96EV2 1170 aaKnown RBP25.21■■□□□ 1.63
PHF1-207ENST00000479029 TBX22Q9Y458 520 aa25.21■■□□□ 1.63
PHF1-207ENST00000479029 NUTM2DQ5VT03 806 aaPredicted RBP25.2■■□□□ 1.62
PHF1-207ENST00000479029 NKTRP30414 1462 aaKnown RBP25.18■■□□□ 1.62
PHF1-207ENST00000479029 MYO5BQ9ULV0 1848 aa25.18■■□□□ 1.62
PHF1-207ENST00000479029 XIRP1Q702N8 1843 aaKnown RBP25.17■■□□□ 1.62
PHF1-207ENST00000479029 FAM135BQ49AJ0 1406 aa25.15■■□□□ 1.62
PHF1-207ENST00000479029 NWD1Q149M9 1564 aa25.14■■□□□ 1.62
PHF1-207ENST00000479029 MED1Q15648 1581 aaPredicted RBP25.14■■□□□ 1.61
PHF1-207ENST00000479029 MSH6P52701 1360 aa25.13■■□□□ 1.61
PHF1-207ENST00000479029 NAIPQ13075 1403 aa25.12■■□□□ 1.61
PHF1-207ENST00000479029 PHF23Q9BUL5 403 aaPredicted RBP25.11■■□□□ 1.61
PHF1-207ENST00000479029 ADAMTS13Q76LX8 1427 aa25.11■■□□□ 1.61
PHF1-207ENST00000479029 ZNF326Q5BKZ1 582 aaKnown RBP25.1■■□□□ 1.61
PHF1-207ENST00000479029 PIK3R4Q99570 1358 aa25.08■■□□□ 1.61
PHF1-207ENST00000479029 TRIM52Q96A61 297 aa25.08■■□□□ 1.61
PHF1-207ENST00000479029 SLAIN2Q9P270 581 aa25.08■■□□□ 1.61
PHF1-207ENST00000479029 C14orf37Q86TY3 774 aa25.07■■□□□ 1.6
PHF1-207ENST00000479029 CHD2O14647 1828 aaKnown RBP25.07■■□□□ 1.6
PHF1-207ENST00000479029 NCOA3Q9Y6Q9 1424 aa25.05■■□□□ 1.6
PHF1-207ENST00000479029 DIP2AQ14689 1571 aa25.05■■□□□ 1.6
PHF1-207ENST00000479029 HFM1A2PYH4 1435 aa25.04■■□□□ 1.6
PHF1-207ENST00000479029 AMOTL2Q9Y2J4 779 aa25.04■■□□□ 1.6
PHF1-207ENST00000479029 SPHKAPQ2M3C7 1700 aa25.03■■□□□ 1.6
PHF1-207ENST00000479029 C19orf44Q9H6X5 657 aa25.01■■□□□ 1.59
PHF1-207ENST00000479029 SLC4A1APQ9BWU0 796 aaKnown RBP25■■□□□ 1.59
PHF1-207ENST00000479029 TRPM2O94759 1503 aa24.99■■□□□ 1.59
PHF1-207ENST00000479029 ROBO1Q9Y6N7 1651 aa24.99■■□□□ 1.59
PHF1-207ENST00000479029 ATF3P18847 181 aa24.98■■□□□ 1.59
PHF1-207ENST00000479029 CADPS2Q86UW7 1296 aa24.98■■□□□ 1.59
PHF1-207ENST00000479029 PTPRUQ92729 1446 aa24.95■■□□□ 1.59
PHF1-207ENST00000479029 CLTCL1P53675 1640 aa24.94■■□□□ 1.58
PHF1-207ENST00000479029 SETBP1Q9Y6X0 1596 aa24.93■■□□□ 1.58
PHF1-207ENST00000479029 METP08581 1390 aa24.92■■□□□ 1.58
PHF1-207ENST00000479029 VGFO15240 615 aaPredicted RBP24.91■■□□□ 1.58
PHF1-207ENST00000479029 NRXN3Q9Y4C0 1643 aa24.89■■□□□ 1.57
PHF1-207ENST00000479029 RPGRIP1LQ68CZ1 1315 aa24.88■■□□□ 1.57
PHF1-207ENST00000479029 NEXMIFQ5QGS0 1516 aa24.88■■□□□ 1.57
PHF1-207ENST00000479029 RGS17Q9UGC6 210 aaPredicted RBP24.88■■□□□ 1.57
PHF1-207ENST00000479029 KIF1BO60333 1816 aa24.86■■□□□ 1.57
PHF1-207ENST00000479029 JCADQ9P266 1359 aa24.86■■□□□ 1.57
PHF1-207ENST00000479029 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.86■■□□□ 1.57
PHF1-207ENST00000479029 FOXD1Q16676 465 aa24.85■■□□□ 1.57
PHF1-207ENST00000479029 DCCP43146 1447 aa24.84■■□□□ 1.57
PHF1-207ENST00000479029 PHLPP1O60346 1717 aa24.83■■□□□ 1.57
PHF1-207ENST00000479029 XRN1Q8IZH2 1706 aaKnown RBP24.83■■□□□ 1.57
PHF1-207ENST00000479029 BRINP3Q76B58 766 aa24.81■■□□□ 1.56
PHF1-207ENST00000479029 MPHOSPH9Q99550 1183 aa24.81■■□□□ 1.56
PHF1-207ENST00000479029 ACIN1Q9UKV3 1341 aaKnown RBP24.78■■□□□ 1.56
PHF1-207ENST00000479029 CCDC144AA2RUR9 1427 aa24.77■■□□□ 1.56
PHF1-207ENST00000479029 COL16A1Q07092 1604 aaPredicted RBP24.76■■□□□ 1.55
PHF1-207ENST00000479029 SPATA31A6Q5VVP1 1343 aa24.76■■□□□ 1.55
PHF1-207ENST00000479029 ADGRL3Q9HAR2 1447 aa24.76■■□□□ 1.55
PHF1-207ENST00000479029 POTEAQ6S8J7 498 aa24.75■■□□□ 1.55
PHF1-207ENST00000479029 AHDC1Q5TGY3 1603 aaPredicted RBP24.75■■□□□ 1.55
PHF1-207ENST00000479029 RGL3Q3MIN7 710 aa24.74■■□□□ 1.55
PHF1-207ENST00000479029 MST1RQ04912 1400 aa24.74■■□□□ 1.55
PHF1-207ENST00000479029 PTCH1Q13635 1447 aa24.71■■□□□ 1.55
PHF1-207ENST00000479029 ROBO2Q9HCK4 1378 aa24.71■■□□□ 1.55
PHF1-207ENST00000479029 MEX3CQ5U5Q3 659 aaKnown RBP24.7■■□□□ 1.54
PHF1-207ENST00000479029 ASXL1Q8IXJ9 1541 aa24.7■■□□□ 1.54
PHF1-207ENST00000479029 SETD5Q9C0A6 1442 aa24.69■■□□□ 1.54
PHF1-207ENST00000479029 ADGRF5Q8IZF2 1346 aa24.68■■□□□ 1.54
PHF1-207ENST00000479029 SPATA31E1Q6ZUB1 1445 aa24.68■■□□□ 1.54
PHF1-207ENST00000479029 ANKRD30BQ9BXX2 1392 aa24.67■■□□□ 1.54
PHF1-207ENST00000479029 LRRC59Q96AG4 307 aaKnown RBP24.67■■□□□ 1.54
PHF1-207ENST00000479029 PPLO60437 1756 aa24.67■■□□□ 1.54
PHF1-207ENST00000479029 PRAG1Q86YV5 1406 aa24.65■■□□□ 1.54
PHF1-207ENST00000479029 SETD1AO15047 1707 aaKnown RBP24.64■■□□□ 1.54
PHF1-207ENST00000479029 NUTM2BA6NNL0 878 aaPredicted RBP24.63■■□□□ 1.53
PHF1-207ENST00000479029 NUTM2EB1AL46 878 aaPredicted RBP24.63■■□□□ 1.53
PHF1-207ENST00000479029 NUTM2AQ8IVF1 878 aaPredicted RBP24.63■■□□□ 1.53
PHF1-207ENST00000479029 DDX17Q92841 729 aaKnown RBP24.63■■□□□ 1.53
PHF1-207ENST00000479029 LRP6O75581 1613 aa24.63■■□□□ 1.53
PHF1-207ENST00000479029 NALCNQ8IZF0 1738 aa24.63■■□□□ 1.53
PHF1-207ENST00000479029 C1orf167Q5SNV9 1468 aa24.63■■□□□ 1.53
PHF1-207ENST00000479029 ZNF772Q68DY9 489 aaPredicted RBP24.62■■□□□ 1.53
PHF1-207ENST00000479029 STK26Q9P289 416 aa24.61■■□□□ 1.53
PHF1-207ENST00000479029 SHPRHQ149N8 1683 aa24.61■■□□□ 1.53
PHF1-207ENST00000479029 ORAI2Q96SN7 254 aa24.59■■□□□ 1.53
PHF1-207ENST00000479029 RAB3GAP2Q9H2M9 1393 aa24.58■■□□□ 1.53
PHF1-207ENST00000479029 TMEM132EQ6IEE7 984 aa24.57■■□□□ 1.52
PHF1-207ENST00000479029 NHSL1Q5SYE7 1610 aa24.57■■□□□ 1.52
PHF1-207ENST00000479029 LRPPRCP42704 1394 aaKnown RBP24.56■■□□□ 1.52
PHF1-207ENST00000479029 WAPLQ7Z5K2 1190 aa24.55■■□□□ 1.52
PHF1-207ENST00000479029 ABCC11Q96J66 1382 aa24.54■■□□□ 1.52
PHF1-207ENST00000479029 PIK3C2GO75747 1445 aa24.54■■□□□ 1.52
PHF1-207ENST00000479029 TECPR2O15040 1411 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms