RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 CFAP65Q6ZU64 1925 aaKnown RBP18.54■□□□□ 0.56
CCDC78-210ENST00000478979 GGT6Q6P531 493 aa18.54■□□□□ 0.56
CCDC78-210ENST00000478979 GSE1Q14687 1217 aa18.53■□□□□ 0.56
CCDC78-210ENST00000478979 WDR43Q15061 677 aaKnown RBP eCLIP18.53■□□□□ 0.56
CCDC78-210ENST00000478979 ATP10AO60312 1499 aa18.53■□□□□ 0.56
CCDC78-210ENST00000478979 CLASP1Q7Z460 1538 aa18.52■□□□□ 0.55
CCDC78-210ENST00000478979 TNNT2P45379 298 aaPredicted RBP18.51■□□□□ 0.55
CCDC78-210ENST00000478979 ADGRF5Q8IZF2 1346 aa18.51■□□□□ 0.55
CCDC78-210ENST00000478979 KANK1Q14678 1352 aa18.51■□□□□ 0.55
CCDC78-210ENST00000478979 MAGI2Q86UL8 1455 aa18.51■□□□□ 0.55
CCDC78-210ENST00000478979 PPP2R1AP30153 589 aa18.51■□□□□ 0.55
CCDC78-210ENST00000478979 ZFYVE16Q7Z3T8 1539 aa18.5■□□□□ 0.55
CCDC78-210ENST00000478979 ADGRL1O94910 1474 aa18.5■□□□□ 0.55
CCDC78-210ENST00000478979 EIF2AK4Q9P2K8 1649 aaKnown RBP18.49■□□□□ 0.55
CCDC78-210ENST00000478979 WDR7Q9Y4E6 1490 aa18.49■□□□□ 0.55
CCDC78-210ENST00000478979 CLTCL1P53675 1640 aa18.48■□□□□ 0.55
CCDC78-210ENST00000478979 MS4A1P11836 297 aa18.48■□□□□ 0.55
CCDC78-210ENST00000478979 C20orf194Q5TEA3 1177 aa18.46■□□□□ 0.55
CCDC78-210ENST00000478979 TRAK1Q9UPV9 953 aa18.46■□□□□ 0.55
CCDC78-210ENST00000478979 UHRF1BP1LA0JNW5 1464 aa18.46■□□□□ 0.55
CCDC78-210ENST00000478979 ATP7AQ04656 1500 aa18.46■□□□□ 0.55
CCDC78-210ENST00000478979 NPM1P06748 294 aaKnown RBP eCLIP18.46■□□□□ 0.54
CCDC78-210ENST00000478979 NFKBIBQ15653 356 aa18.46■□□□□ 0.54
CCDC78-210ENST00000478979 AMER1Q5JTC6 1135 aaPredicted RBP18.46■□□□□ 0.54
CCDC78-210ENST00000478979 FRAT1Q92837 279 aaPredicted RBP18.46■□□□□ 0.54
CCDC78-210ENST00000478979 CRBNQ96SW2 442 aa18.46■□□□□ 0.54
CCDC78-210ENST00000478979 TMEM132EQ6IEE7 984 aa18.45■□□□□ 0.54
CCDC78-210ENST00000478979 MADDQ8WXG6 1647 aa18.44■□□□□ 0.54
CCDC78-210ENST00000478979 ASXL2Q76L83 1435 aa18.44■□□□□ 0.54
CCDC78-210ENST00000478979 DDRGK1Q96HY6 314 aa18.43■□□□□ 0.54
CCDC78-210ENST00000478979 SPHKAPQ2M3C7 1700 aa18.43■□□□□ 0.54
CCDC78-210ENST00000478979 PDE3BQ13370 1112 aa18.43■□□□□ 0.54
CCDC78-210ENST00000478979 SCAF11Q99590 1463 aaKnown RBP18.42■□□□□ 0.54
CCDC78-210ENST00000478979 SAFB2Q14151 953 aaKnown RBP eCLIP18.42■□□□□ 0.54
CCDC78-210ENST00000478979 TRPM2O94759 1503 aa18.41■□□□□ 0.54
CCDC78-210ENST00000478979 CDCA8Q53HL2 280 aa18.41■□□□□ 0.54
CCDC78-210ENST00000478979 PLEKHH1Q9ULM0 1364 aa18.41■□□□□ 0.54
CCDC78-210ENST00000478979 RTEL1-TNFRSF6BF6WH68 1400 aa18.4■□□□□ 0.54
CCDC78-210ENST00000478979 NEUROD2Q15784 382 aa18.4■□□□□ 0.54
CCDC78-210ENST00000478979 SLC4A3P48751 1232 aa18.4■□□□□ 0.54
CCDC78-210ENST00000478979 APAF1O14727 1248 aa18.39■□□□□ 0.54
CCDC78-210ENST00000478979 RAPGEF3O95398 923 aa18.39■□□□□ 0.54
CCDC78-210ENST00000478979 RNF17Q9BXT8 1623 aaKnown RBP18.39■□□□□ 0.53
CCDC78-210ENST00000478979 LAMC1P11047 1609 aa18.38■□□□□ 0.53
CCDC78-210ENST00000478979 CARD14Q9BXL6 1004 aa18.37■□□□□ 0.53
CCDC78-210ENST00000478979 PTPRTO14522 1441 aa18.37■□□□□ 0.53
CCDC78-210ENST00000478979 BLMP54132 1417 aaPredicted RBP18.37■□□□□ 0.53
CCDC78-210ENST00000478979 CEP152O94986 1710 aa18.37■□□□□ 0.53
CCDC78-210ENST00000478979 EIF3AQ14152 1382 aaKnown RBP18.37■□□□□ 0.53
CCDC78-210ENST00000478979 SPINK5Q9NQ38 1064 aaPredicted RBP18.35■□□□□ 0.53
CCDC78-210ENST00000478979 IQGAP1P46940 1657 aa18.35■□□□□ 0.53
CCDC78-210ENST00000478979 NOS1P29475 1434 aa18.35■□□□□ 0.53
CCDC78-210ENST00000478979 SLC12A5Q9H2X9 1139 aa18.35■□□□□ 0.53
CCDC78-210ENST00000478979 TET3O43151 1660 aa18.34■□□□□ 0.53
CCDC78-210ENST00000478979 RSPH6AQ9H0K4 717 aa18.34■□□□□ 0.53
CCDC78-210ENST00000478979 GOLGA2Q08379 1002 aa18.34■□□□□ 0.53
CCDC78-210ENST00000478979 RRP7AQ9Y3A4 280 aaKnown RBP18.34■□□□□ 0.53
CCDC78-210ENST00000478979 INO80Q9ULG1 1556 aaPredicted RBP18.33■□□□□ 0.52
CCDC78-210ENST00000478979 DUSP27Q5VZP5 1158 aa18.32■□□□□ 0.52
CCDC78-210ENST00000478979 DAXXQ9UER7 740 aaPredicted RBP18.32■□□□□ 0.52
CCDC78-210ENST00000478979 ABCA9Q8IUA7 1624 aa18.32■□□□□ 0.52
CCDC78-210ENST00000478979 DMRT2Q9Y5R5 561 aa18.32■□□□□ 0.52
CCDC78-210ENST00000478979 ASXL1Q8IXJ9 1541 aa18.31■□□□□ 0.52
CCDC78-210ENST00000478979 STK26Q9P289 416 aa18.31■□□□□ 0.52
CCDC78-210ENST00000478979 FAM43AQ8N2R8 423 aa18.31■□□□□ 0.52
CCDC78-210ENST00000478979 CENPJQ9HC77 1338 aaPredicted RBP18.3■□□□□ 0.52
CCDC78-210ENST00000478979 OSCARQ8IYS5 282 aa18.3■□□□□ 0.52
CCDC78-210ENST00000478979 ZMYM4Q5VZL5 1548 aa18.3■□□□□ 0.52
CCDC78-210ENST00000478979 DEPDC5O75140 1603 aa18.29■□□□□ 0.52
CCDC78-210ENST00000478979 CD109Q6YHK3 1445 aa18.29■□□□□ 0.52
CCDC78-210ENST00000478979 BCAR3O75815 825 aa18.29■□□□□ 0.52
CCDC78-210ENST00000478979 ABCA6Q8N139 1617 aa18.29■□□□□ 0.52
CCDC78-210ENST00000478979 ERVK-7P63135 1459 aa18.29■□□□□ 0.52
CCDC78-210ENST00000478979 FRAT2O75474 233 aaPredicted RBP18.28■□□□□ 0.52
CCDC78-210ENST00000478979 MORC1Q86VD1 984 aa18.28■□□□□ 0.52
CCDC78-210ENST00000478979 MROH1Q8NDA8 1641 aa18.28■□□□□ 0.52
CCDC78-210ENST00000478979 KIDINS220Q9ULH0 1771 aa18.28■□□□□ 0.52
CCDC78-210ENST00000478979 MROH2AA6NES4 1674 aa18.27■□□□□ 0.52
CCDC78-210ENST00000478979 PPRC1Q5VV67 1664 aaKnown RBP18.27■□□□□ 0.51
CCDC78-210ENST00000478979 KIF1BO60333 1816 aa18.26■□□□□ 0.51
CCDC78-210ENST00000478979 SYNMO15061 1565 aa18.26■□□□□ 0.51
CCDC78-210ENST00000478979 ARAP3Q8WWN8 1544 aa18.26■□□□□ 0.51
CCDC78-210ENST00000478979 MYOM1P52179 1685 aa18.26■□□□□ 0.51
CCDC78-210ENST00000478979 RGS3P49796 1198 aa18.26■□□□□ 0.51
CCDC78-210ENST00000478979 KDM5AP29375 1690 aaKnown RBP18.25■□□□□ 0.51
CCDC78-210ENST00000478979 MAP3K4Q9Y6R4 1608 aa18.25■□□□□ 0.51
CCDC78-210ENST00000478979 STAC3Q96MF2 364 aa18.25■□□□□ 0.51
CCDC78-210ENST00000478979 ZNF518AQ6AHZ1 1483 aa18.24■□□□□ 0.51
CCDC78-210ENST00000478979 NPATQ14207 1427 aa18.24■□□□□ 0.51
CCDC78-210ENST00000478979 EFCAB6Q5THR3 1501 aa18.24■□□□□ 0.51
CCDC78-210ENST00000478979 SLFN5Q08AF3 891 aa18.24■□□□□ 0.51
CCDC78-210ENST00000478979 CABP2Q9NPB3 220 aa18.24■□□□□ 0.51
CCDC78-210ENST00000478979 NSD3Q9BZ95 1437 aa18.23■□□□□ 0.51
CCDC78-210ENST00000478979 VWDEQ8N2E2 1590 aa18.23■□□□□ 0.51
CCDC78-210ENST00000478979 CANXP27824 592 aaKnown RBP18.22■□□□□ 0.51
CCDC78-210ENST00000478979 BCL2L13Q9BXK5 485 aa18.21■□□□□ 0.51
CCDC78-210ENST00000478979 PKNOX2Q96KN3 472 aa18.2■□□□□ 0.5
CCDC78-210ENST00000478979 ZNF521Q96K83 1311 aa18.2■□□□□ 0.5
CCDC78-210ENST00000478979 PIK3C2GO75747 1445 aa18.19■□□□□ 0.5
CCDC78-210ENST00000478979 MTHFSP49914 203 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms