RNA–Protein interactions for RNA: ENST00000478720.1

ITSN2-211, Transcript of intersectin 2, humanhuman

TSL 2

Gene ITSN2, Length 2,035 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-211ENST00000478720 IFT172Q9UG01 1749 aa20.04■□□□□ 0.8
ITSN2-211ENST00000478720 PPRC1Q5VV67 1664 aaKnown RBP20.04■□□□□ 0.8
ITSN2-211ENST00000478720 CFAP74Q9C0B2 1584 aa20.04■□□□□ 0.8
ITSN2-211ENST00000478720 CDCA8Q53HL2 280 aa20.04■□□□□ 0.8
ITSN2-211ENST00000478720 MYT1LQ9UL68 1186 aa20.04■□□□□ 0.8
ITSN2-211ENST00000478720 EIF3AQ14152 1382 aaKnown RBP20.03■□□□□ 0.8
ITSN2-211ENST00000478720 MYOM1P52179 1685 aa20.03■□□□□ 0.8
ITSN2-211ENST00000478720 ABCA6Q8N139 1617 aa20.03■□□□□ 0.8
ITSN2-211ENST00000478720 UGGT1Q9NYU2 1555 aa20.03■□□□□ 0.8
ITSN2-211ENST00000478720 MROH2AA6NES4 1674 aa20■□□□□ 0.79
ITSN2-211ENST00000478720 KDM5AP29375 1690 aaKnown RBP20■□□□□ 0.79
ITSN2-211ENST00000478720 NRXN1Q9ULB1 1477 aa19.99■□□□□ 0.79
ITSN2-211ENST00000478720 RRP1P56182 461 aaKnown RBP19.98■□□□□ 0.79
ITSN2-211ENST00000478720 KNSTRNQ9Y448 316 aa19.98■□□□□ 0.79
ITSN2-211ENST00000478720 ASXL1Q8IXJ9 1541 aa19.98■□□□□ 0.79
ITSN2-211ENST00000478720 AMER1Q5JTC6 1135 aaPredicted RBP19.98■□□□□ 0.79
ITSN2-211ENST00000478720 CCDC136Q96JN2 1154 aa19.97■□□□□ 0.79
ITSN2-211ENST00000478720 RCAN3Q9UKA8 241 aa19.97■□□□□ 0.79
ITSN2-211ENST00000478720 POGZQ7Z3K3 1410 aa19.97■□□□□ 0.79
ITSN2-211ENST00000478720 NPC1L1Q9UHC9 1359 aa19.96■□□□□ 0.79
ITSN2-211ENST00000478720 MLH3Q9UHC1 1453 aa19.96■□□□□ 0.79
ITSN2-211ENST00000478720 ADGRB3O60242 1522 aa19.96■□□□□ 0.79
ITSN2-211ENST00000478720 FRMPD1Q5SYB0 1578 aa19.95■□□□□ 0.78
ITSN2-211ENST00000478720 NPM1P06748 294 aaKnown RBP eCLIP19.95■□□□□ 0.78
ITSN2-211ENST00000478720 SALL2Q9Y467 1007 aaPredicted RBP19.95■□□□□ 0.78
ITSN2-211ENST00000478720 CD109Q6YHK3 1445 aa19.95■□□□□ 0.78
ITSN2-211ENST00000478720 PPP2R1AP30153 589 aa19.95■□□□□ 0.78
ITSN2-211ENST00000478720 OSCARQ8IYS5 282 aa19.95■□□□□ 0.78
ITSN2-211ENST00000478720 ADGRF5Q8IZF2 1346 aa19.95■□□□□ 0.78
ITSN2-211ENST00000478720 MYO3AQ8NEV4 1616 aa19.94■□□□□ 0.78
ITSN2-211ENST00000478720 MSH5O43196 834 aa19.94■□□□□ 0.78
ITSN2-211ENST00000478720 SLC24A1O60721 1099 aa19.94■□□□□ 0.78
ITSN2-211ENST00000478720 HECW2Q9P2P5 1572 aa19.94■□□□□ 0.78
ITSN2-211ENST00000478720 CFAP70Q5T0N1 1121 aa19.93■□□□□ 0.78
ITSN2-211ENST00000478720 ERVK-7P63135 1459 aa19.93■□□□□ 0.78
ITSN2-211ENST00000478720 PIK3C2GO75747 1445 aa19.92■□□□□ 0.78
ITSN2-211ENST00000478720 SETBP1Q9Y6X0 1596 aa19.91■□□□□ 0.78
ITSN2-211ENST00000478720 CDCA7LQ96GN5 454 aa19.91■□□□□ 0.78
ITSN2-211ENST00000478720 NPATQ14207 1427 aa19.89■□□□□ 0.77
ITSN2-211ENST00000478720 ADAMTS8Q9UP79 889 aa19.89■□□□□ 0.77
ITSN2-211ENST00000478720 PPLO60437 1756 aa19.89■□□□□ 0.77
ITSN2-211ENST00000478720 SBNO2Q9Y2G9 1366 aa19.88■□□□□ 0.77
ITSN2-211ENST00000478720 NOS1P29475 1434 aa19.88■□□□□ 0.77
ITSN2-211ENST00000478720 ABCC3O15438 1527 aa19.86■□□□□ 0.77
ITSN2-211ENST00000478720 EXOC6Q8TAG9 804 aa19.86■□□□□ 0.77
ITSN2-211ENST00000478720 WDR43Q15061 677 aaKnown RBP eCLIP19.85■□□□□ 0.77
ITSN2-211ENST00000478720 NEO1Q92859 1461 aa19.85■□□□□ 0.77
ITSN2-211ENST00000478720 ZC3H13Q5T200 1668 aaKnown RBP19.84■□□□□ 0.77
ITSN2-211ENST00000478720 CAMSAP1Q5T5Y3 1602 aa19.83■□□□□ 0.76
ITSN2-211ENST00000478720 ADGRB1O14514 1584 aa19.81■□□□□ 0.76
ITSN2-211ENST00000478720 PLEKHH1Q9ULM0 1364 aa19.81■□□□□ 0.76
ITSN2-211ENST00000478720 CFAP65Q6ZU64 1925 aaKnown RBP19.81■□□□□ 0.76
ITSN2-211ENST00000478720 ZNF521Q96K83 1311 aa19.81■□□□□ 0.76
ITSN2-211ENST00000478720 RPGRIP1LQ68CZ1 1315 aa19.8■□□□□ 0.76
ITSN2-211ENST00000478720 GGT6Q6P531 493 aa19.8■□□□□ 0.76
ITSN2-211ENST00000478720 C14orf93Q9H972 538 aaKnown RBP19.8■□□□□ 0.76
ITSN2-211ENST00000478720 CENPJQ9HC77 1338 aaPredicted RBP19.79■□□□□ 0.76
ITSN2-211ENST00000478720 PIK3C2BO00750 1634 aa19.79■□□□□ 0.76
ITSN2-211ENST00000478720 CARD14Q9BXL6 1004 aa19.79■□□□□ 0.76
ITSN2-211ENST00000478720 QRICH2Q9H0J4 1663 aa19.79■□□□□ 0.76
ITSN2-211ENST00000478720 SIGLEC1Q9BZZ2 1709 aa19.79■□□□□ 0.76
ITSN2-211ENST00000478720 DIP2CQ9Y2E4 1556 aa19.79■□□□□ 0.76
ITSN2-211ENST00000478720 CHGAP10645 457 aaKnown RBP19.78■□□□□ 0.76
ITSN2-211ENST00000478720 DUSP27Q5VZP5 1158 aa19.75■□□□□ 0.75
ITSN2-211ENST00000478720 RICTORQ6R327 1708 aa19.75■□□□□ 0.75
ITSN2-211ENST00000478720 PLIN1O60240 522 aa19.73■□□□□ 0.75
ITSN2-211ENST00000478720 GOLGA2Q08379 1002 aa19.73■□□□□ 0.75
ITSN2-211ENST00000478720 ARHGAP31Q2M1Z3 1444 aa19.72■□□□□ 0.75
ITSN2-211ENST00000478720 RAPGEF3O95398 923 aa19.72■□□□□ 0.75
ITSN2-211ENST00000478720 ERICH6Q7L0X2 663 aa19.72■□□□□ 0.75
ITSN2-211ENST00000478720 TRAK1Q9UPV9 953 aa19.72■□□□□ 0.75
ITSN2-211ENST00000478720 NEXMIFQ5QGS0 1516 aa19.72■□□□□ 0.75
ITSN2-211ENST00000478720 CRBNQ96SW2 442 aa19.71■□□□□ 0.75
ITSN2-211ENST00000478720 USP32Q8NFA0 1604 aa19.71■□□□□ 0.75
ITSN2-211ENST00000478720 GLI2P10070 1586 aa19.71■□□□□ 0.75
ITSN2-211ENST00000478720 TCERG1O14776 1098 aaKnown RBP19.7■□□□□ 0.74
ITSN2-211ENST00000478720 POLR3AO14802 1390 aaPredicted RBP19.7■□□□□ 0.74
ITSN2-211ENST00000478720 SLFN5Q08AF3 891 aa19.69■□□□□ 0.74
ITSN2-211ENST00000478720 TRMT2AQ8IZ69 625 aaKnown RBP19.69■□□□□ 0.74
ITSN2-211ENST00000478720 ARHGEF28Q8N1W1 1705 aaKnown RBP19.69■□□□□ 0.74
ITSN2-211ENST00000478720 NSD3Q9BZ95 1437 aa19.69■□□□□ 0.74
ITSN2-211ENST00000478720 CCDC146Q8IYE0 955 aa19.68■□□□□ 0.74
ITSN2-211ENST00000478720 TMEM132EQ6IEE7 984 aa19.68■□□□□ 0.74
ITSN2-211ENST00000478720 NGEFQ8N5V2 710 aa19.67■□□□□ 0.74
ITSN2-211ENST00000478720 VGFO15240 615 aaPredicted RBP19.66■□□□□ 0.74
ITSN2-211ENST00000478720 PUS7Q96PZ0 661 aaKnown RBP19.66■□□□□ 0.74
ITSN2-211ENST00000478720 SHPRHQ149N8 1683 aa19.65■□□□□ 0.74
ITSN2-211ENST00000478720 APAF1O14727 1248 aa19.65■□□□□ 0.74
ITSN2-211ENST00000478720 MS4A1P11836 297 aa19.64■□□□□ 0.74
ITSN2-211ENST00000478720 C20orf194Q5TEA3 1177 aa19.64■□□□□ 0.74
ITSN2-211ENST00000478720 ZFYVE9O95405 1425 aa19.64■□□□□ 0.74
ITSN2-211ENST00000478720 SLC12A5Q9H2X9 1139 aa19.64■□□□□ 0.73
ITSN2-211ENST00000478720 TULP4Q9NRJ4 1543 aa19.64■□□□□ 0.73
ITSN2-211ENST00000478720 YEATS2Q9ULM3 1422 aa19.63■□□□□ 0.73
ITSN2-211ENST00000478720 NKTRP30414 1462 aaKnown RBP19.63■□□□□ 0.73
ITSN2-211ENST00000478720 ANP32AP39687 249 aaKnown RBP19.63■□□□□ 0.73
ITSN2-211ENST00000478720 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.62■□□□□ 0.73
ITSN2-211ENST00000478720 NOP58Q9Y2X3 529 aaKnown RBP19.62■□□□□ 0.73
ITSN2-211ENST00000478720 MORC1Q86VD1 984 aa19.61■□□□□ 0.73
ITSN2-211ENST00000478720 PREX1Q8TCU6 1659 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms