RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 MTRQ99707 1265 aa8.88□□□□□ -0.99
GPNMB-210ENST00000478451 TULP1O00294 542 aaPredicted RBP8.87□□□□□ -0.99
GPNMB-210ENST00000478451 C3orf80F5H4A9 247 aa8.86□□□□□ -0.99
GPNMB-210ENST00000478451 SMAPO00193 183 aa8.86□□□□□ -0.99
GPNMB-210ENST00000478451 GGCXP38435 758 aa8.86□□□□□ -0.99
GPNMB-210ENST00000478451 PNMA3Q9UL41 463 aa8.86□□□□□ -0.99
GPNMB-210ENST00000478451 NUDT18Q6ZVK8 323 aa8.85□□□□□ -0.99
GPNMB-210ENST00000478451 TATDN2Q93075 761 aa8.85□□□□□ -0.99
GPNMB-210ENST00000478451 TMUB1Q9BVT8 246 aa8.85□□□□□ -0.99
GPNMB-210ENST00000478451 TRIM67Q6ZTA4 783 aa8.84□□□□□ -0.99
GPNMB-210ENST00000478451 GPIHBP1Q8IV16 184 aa8.84□□□□□ -0.99
GPNMB-210ENST00000478451 GPR37O15354 613 aa8.83□□□□□ -1
GPNMB-210ENST00000478451 INSM1Q01101 510 aaPredicted RBP8.83□□□□□ -1
GPNMB-210ENST00000478451 HIC1Q14526 733 aa8.83□□□□□ -1
GPNMB-210ENST00000478451 PRR20EP86478 221 aa8.82□□□□□ -1
GPNMB-210ENST00000478451 PRR20CP86479 221 aa8.82□□□□□ -1
GPNMB-210ENST00000478451 PRR20DP86480 221 aa8.82□□□□□ -1
GPNMB-210ENST00000478451 PRR20BP86481 221 aa8.82□□□□□ -1
GPNMB-210ENST00000478451 PRR20AP86496 221 aa8.82□□□□□ -1
GPNMB-210ENST00000478451 WIPF1O43516 503 aa8.81□□□□□ -1
GPNMB-210ENST00000478451 GNPATO15228 680 aa8.8□□□□□ -1
GPNMB-210ENST00000478451 WFS1O76024 890 aa8.79□□□□□ -1
GPNMB-210ENST00000478451 ZNF516Q92618 1163 aa8.79□□□□□ -1
GPNMB-210ENST00000478451 ADGRG1Q9Y653 693 aa8.79□□□□□ -1
GPNMB-210ENST00000478451 SAMD7Q7Z3H4 446 aa8.78□□□□□ -1
GPNMB-210ENST00000478451 EYA1Q99502 592 aa8.78□□□□□ -1
GPNMB-210ENST00000478451 FECHP22830 423 aa8.77□□□□□ -1.01
GPNMB-210ENST00000478451 FAM161AQ3B820 660 aa8.77□□□□□ -1.01
GPNMB-210ENST00000478451 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.77□□□□□ -1.01
GPNMB-210ENST00000478451 RBM46Q8TBY0 533 aaKnown RBP8.77□□□□□ -1.01
GPNMB-210ENST00000478451 LMOD2Q6P5Q4 547 aa8.76□□□□□ -1.01
GPNMB-210ENST00000478451 DNAJB2P25686 324 aa8.74□□□□□ -1.01
GPNMB-210ENST00000478451 SLC19A1P41440 591 aa8.74□□□□□ -1.01
GPNMB-210ENST00000478451 RNF40O75150 1001 aa8.73□□□□□ -1.01
GPNMB-210ENST00000478451 HDGFP51858 240 aaKnown RBP8.73□□□□□ -1.01
GPNMB-210ENST00000478451 SWT1Q5T5J6 900 aaKnown RBP8.73□□□□□ -1.01
GPNMB-210ENST00000478451 NKX2-3Q8TAU0 364 aa8.73□□□□□ -1.01
GPNMB-210ENST00000478451 OATP04181 439 aa8.72□□□□□ -1.01
GPNMB-210ENST00000478451 ZNF598Q86UK7 904 aaKnown RBP8.72□□□□□ -1.01
GPNMB-210ENST00000478451 PXYLP1Q8TE99 480 aa8.72□□□□□ -1.01
GPNMB-210ENST00000478451 RCCD1A6NED2 376 aa8.71□□□□□ -1.02
GPNMB-210ENST00000478451 SPRYD7Q5W111 196 aa8.71□□□□□ -1.02
GPNMB-210ENST00000478451 METTL3Q86U44 580 aaKnown RBP8.71□□□□□ -1.02
GPNMB-210ENST00000478451 TMEM134Q9H6X4 195 aa8.71□□□□□ -1.02
GPNMB-210ENST00000478451 AAASQ9NRG9 546 aa8.71□□□□□ -1.02
GPNMB-210ENST00000478451 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.7□□□□□ -1.02
GPNMB-210ENST00000478451 FAM187AA6NFU0 413 aa8.7□□□□□ -1.02
GPNMB-210ENST00000478451 MAP2K5Q13163 448 aa8.7□□□□□ -1.02
GPNMB-210ENST00000478451 SLF2Q8IX21 1173 aa8.7□□□□□ -1.02
GPNMB-210ENST00000478451 SLC4A3P48751 1232 aa8.69□□□□□ -1.02
GPNMB-210ENST00000478451 NFX1Q12986 1120 aaKnown RBP8.69□□□□□ -1.02
GPNMB-210ENST00000478451 NECTIN2Q92692 538 aa8.69□□□□□ -1.02
GPNMB-210ENST00000478451 APLP1P51693 650 aa8.67□□□□□ -1.02
GPNMB-210ENST00000478451 CRIPAKQ8N1N5 446 aa8.67□□□□□ -1.02
GPNMB-210ENST00000478451 EMID1Q96A84 441 aaPredicted RBP8.67□□□□□ -1.02
GPNMB-210ENST00000478451 BCANQ96GW7 911 aa8.67□□□□□ -1.02
GPNMB-210ENST00000478451 ST8SIA5O15466 376 aa8.66□□□□□ -1.02
GPNMB-210ENST00000478451 GDF9O60383 454 aa8.65□□□□□ -1.02
GPNMB-210ENST00000478451 ZC3H15Q8WU90 426 aaKnown RBP8.65□□□□□ -1.02
GPNMB-210ENST00000478451 MINK1Q8N4C8 1332 aaPredicted RBP8.64□□□□□ -1.03
GPNMB-210ENST00000478451 RNF223E7ERA6 249 aa8.64□□□□□ -1.03
GPNMB-210ENST00000478451 IRF6O14896 467 aa8.64□□□□□ -1.03
GPNMB-210ENST00000478451 NLRP7Q8WX94 980 aa8.64□□□□□ -1.03
GPNMB-210ENST00000478451 CCDC102AQ96A19 550 aa8.64□□□□□ -1.03
GPNMB-210ENST00000478451 PHOX2BQ99453 314 aa8.64□□□□□ -1.03
GPNMB-210ENST00000478451 FAM181BA6NEQ2 426 aa8.63□□□□□ -1.03
GPNMB-210ENST00000478451 ZPR1O75312 459 aa8.63□□□□□ -1.03
GPNMB-210ENST00000478451 ZMYND10O75800 440 aa8.62□□□□□ -1.03
GPNMB-210ENST00000478451 ZNF697Q5TEC3 545 aa8.62□□□□□ -1.03
GPNMB-210ENST00000478451 BARGINQ6ZT62 677 aa8.61□□□□□ -1.03
GPNMB-210ENST00000478451 ANKLE1Q8NAG6 615 aa8.61□□□□□ -1.03
GPNMB-210ENST00000478451 DAXXQ9UER7 740 aaPredicted RBP8.61□□□□□ -1.03
GPNMB-210ENST00000478451 C11orf95C9JLR9 678 aaPredicted RBP8.59□□□□□ -1.03
GPNMB-210ENST00000478451 CFHP08603 1231 aa8.59□□□□□ -1.03
GPNMB-210ENST00000478451 SLC10A3P09131 477 aa8.59□□□□□ -1.03
GPNMB-210ENST00000478451 COPS2P61201 443 aa8.59□□□□□ -1.03
GPNMB-210ENST00000478451 SUZ12Q15022 739 aaKnown RBP8.59□□□□□ -1.03
GPNMB-210ENST00000478451 KRI1Q8N9T8 703 aaKnown RBP8.59□□□□□ -1.03
GPNMB-210ENST00000478451 PRR14Q9BWN1 585 aa8.59□□□□□ -1.03
GPNMB-210ENST00000478451 KMT5BQ4FZB7 885 aa8.58□□□□□ -1.04
GPNMB-210ENST00000478451 DDX11L8A8MPP1 907 aa8.57□□□□□ -1.04
GPNMB-210ENST00000478451 TNFRSF10AO00220 468 aa8.57□□□□□ -1.04
GPNMB-210ENST00000478451 AVPP01185 164 aa8.57□□□□□ -1.04
GPNMB-210ENST00000478451 RSPH4AQ5TD94 716 aa8.57□□□□□ -1.04
GPNMB-210ENST00000478451 LIAT1Q6ZQX7 453 aa8.56□□□□□ -1.04
GPNMB-210ENST00000478451 SULF1Q8IWU6 871 aa8.56□□□□□ -1.04
GPNMB-210ENST00000478451 RDH13Q8NBN7 331 aa8.56□□□□□ -1.04
GPNMB-210ENST00000478451 GMPR2Q9P2T1 348 aaKnown RBP8.56□□□□□ -1.04
GPNMB-210ENST00000478451 ACTN4O43707 911 aaKnown RBP8.55□□□□□ -1.04
GPNMB-210ENST00000478451 MDM2Q00987 491 aaPredicted RBP8.55□□□□□ -1.04
GPNMB-210ENST00000478451 PCDHB3Q9Y5E6 796 aa8.55□□□□□ -1.04
GPNMB-210ENST00000478451 CTC1Q2NKJ3 1217 aa8.54□□□□□ -1.04
GPNMB-210ENST00000478451 DACH1Q9UI36 760 aa8.53□□□□□ -1.04
GPNMB-210ENST00000478451 TERTO14746 1132 aaKnown RBP8.52□□□□□ -1.05
GPNMB-210ENST00000478451 CLCN1P35523 988 aa8.52□□□□□ -1.05
GPNMB-210ENST00000478451 SMCPP49901 116 aaPredicted RBP8.52□□□□□ -1.05
GPNMB-210ENST00000478451 LCE2CQ5TA81 110 aa8.52□□□□□ -1.05
GPNMB-210ENST00000478451 GPCPD1Q9NPB8 672 aa8.52□□□□□ -1.05
GPNMB-210ENST00000478451 NISCHQ9Y2I1 1504 aa8.52□□□□□ -1.05
GPNMB-210ENST00000478451 AXIN1O15169 862 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms