RNA–Protein interactions for RNA: ENST00000478359.5

TRAF3IP3-213, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 1 (best)

Gene TRAF3IP3, Length 1,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-213ENST00000478359 REREQ9P2R6 1566 aa17.01■□□□□ 0.31
TRAF3IP3-213ENST00000478359 MROH2AA6NES4 1674 aa17.01■□□□□ 0.31
TRAF3IP3-213ENST00000478359 NOS1P29475 1434 aa17.01■□□□□ 0.31
TRAF3IP3-213ENST00000478359 SETBP1Q9Y6X0 1596 aa16.99■□□□□ 0.31
TRAF3IP3-213ENST00000478359 PIK3C2BO00750 1634 aa16.98■□□□□ 0.31
TRAF3IP3-213ENST00000478359 BRD4O60885 1362 aaPredicted RBP16.97■□□□□ 0.31
TRAF3IP3-213ENST00000478359 DISP3Q9P2K9 1392 aa16.97■□□□□ 0.31
TRAF3IP3-213ENST00000478359 PPLO60437 1756 aa16.97■□□□□ 0.31
TRAF3IP3-213ENST00000478359 MYBBP1AQ9BQG0 1328 aaKnown RBP16.97■□□□□ 0.31
TRAF3IP3-213ENST00000478359 PPP6R1Q9UPN7 881 aa16.97■□□□□ 0.31
TRAF3IP3-213ENST00000478359 SUPT16HQ9Y5B9 1047 aaKnown RBP16.97■□□□□ 0.31
TRAF3IP3-213ENST00000478359 YEATS2Q9ULM3 1422 aa16.96■□□□□ 0.31
TRAF3IP3-213ENST00000478359 ZBED9Q6R2W3 1325 aa16.96■□□□□ 0.31
TRAF3IP3-213ENST00000478359 NEFLP07196 543 aa16.96■□□□□ 0.31
TRAF3IP3-213ENST00000478359 CCDC184Q52MB2 194 aa16.96■□□□□ 0.31
TRAF3IP3-213ENST00000478359 FAM9BQ8IZU0 186 aa16.96■□□□□ 0.31
TRAF3IP3-213ENST00000478359 AGLP35573 1532 aa16.95■□□□□ 0.3
TRAF3IP3-213ENST00000478359 PELP1Q8IZL8 1130 aaKnown RBP16.95■□□□□ 0.3
TRAF3IP3-213ENST00000478359 SYNMO15061 1565 aa16.94■□□□□ 0.3
TRAF3IP3-213ENST00000478359 MYO3AQ8NEV4 1616 aa16.94■□□□□ 0.3
TRAF3IP3-213ENST00000478359 TMC1Q8TDI8 760 aa16.94■□□□□ 0.3
TRAF3IP3-213ENST00000478359 SLC52A1Q9NWF4 448 aa16.94■□□□□ 0.3
TRAF3IP3-213ENST00000478359 PARD3Q8TEW0 1356 aa16.94■□□□□ 0.3
TRAF3IP3-213ENST00000478359 PER1O15534 1290 aaPredicted RBP16.93■□□□□ 0.3
TRAF3IP3-213ENST00000478359 SBNO2Q9Y2G9 1366 aa16.93■□□□□ 0.3
TRAF3IP3-213ENST00000478359 SIGLEC1Q9BZZ2 1709 aa16.93■□□□□ 0.3
TRAF3IP3-213ENST00000478359 PIK3C2GO75747 1445 aa16.92■□□□□ 0.3
TRAF3IP3-213ENST00000478359 KDM5AP29375 1690 aaKnown RBP16.92■□□□□ 0.3
TRAF3IP3-213ENST00000478359 ADGRF5Q8IZF2 1346 aa16.91■□□□□ 0.3
TRAF3IP3-213ENST00000478359 TSPOAP1O95153 1857 aa16.91■□□□□ 0.3
TRAF3IP3-213ENST00000478359 NLRP13Q86W25 1043 aa16.9■□□□□ 0.3
TRAF3IP3-213ENST00000478359 CHGAP10645 457 aaKnown RBP16.9■□□□□ 0.3
TRAF3IP3-213ENST00000478359 CFAP65Q6ZU64 1925 aaKnown RBP16.89■□□□□ 0.3
TRAF3IP3-213ENST00000478359 KIF13AQ9H1H9 1805 aa16.89■□□□□ 0.29
TRAF3IP3-213ENST00000478359 VGFO15240 615 aaPredicted RBP16.89■□□□□ 0.29
TRAF3IP3-213ENST00000478359 CFAP70Q5T0N1 1121 aa16.89■□□□□ 0.29
TRAF3IP3-213ENST00000478359 PREX1Q8TCU6 1659 aa16.89■□□□□ 0.29
TRAF3IP3-213ENST00000478359 PNISRQ8TF01 805 aaKnown RBP16.88■□□□□ 0.29
TRAF3IP3-213ENST00000478359 PANK3Q9H999 370 aa16.88■□□□□ 0.29
TRAF3IP3-213ENST00000478359 ZFYVE9O95405 1425 aa16.88■□□□□ 0.29
TRAF3IP3-213ENST00000478359 C14orf93Q9H972 538 aaKnown RBP16.88■□□□□ 0.29
TRAF3IP3-213ENST00000478359 INSRP06213 1382 aa16.87■□□□□ 0.29
TRAF3IP3-213ENST00000478359 LRPPRCP42704 1394 aaKnown RBP16.86■□□□□ 0.29
TRAF3IP3-213ENST00000478359 NEXMIFQ5QGS0 1516 aa16.86■□□□□ 0.29
TRAF3IP3-213ENST00000478359 NPC1L1Q9UHC9 1359 aa16.85■□□□□ 0.29
TRAF3IP3-213ENST00000478359 TRHP20396 242 aaPredicted RBP16.84■□□□□ 0.29
TRAF3IP3-213ENST00000478359 KNSTRNQ9Y448 316 aa16.84■□□□□ 0.29
TRAF3IP3-213ENST00000478359 ADGRB1O14514 1584 aa16.84■□□□□ 0.29
TRAF3IP3-213ENST00000478359 MYOM1P52179 1685 aa16.84■□□□□ 0.29
TRAF3IP3-213ENST00000478359 ARHGEF40Q8TER5 1519 aa16.83■□□□□ 0.29
TRAF3IP3-213ENST00000478359 FKBP8Q14318 412 aa16.83■□□□□ 0.28
TRAF3IP3-213ENST00000478359 ERICH6BQ5W0A0 696 aa16.82■□□□□ 0.28
TRAF3IP3-213ENST00000478359 CENPJQ9HC77 1338 aaPredicted RBP16.82■□□□□ 0.28
TRAF3IP3-213ENST00000478359 ERVK-7P63135 1459 aa16.82■□□□□ 0.28
TRAF3IP3-213ENST00000478359 TMEM131LA2VDJ0 1609 aa16.82■□□□□ 0.28
TRAF3IP3-213ENST00000478359 ASXL1Q8IXJ9 1541 aa16.81■□□□□ 0.28
TRAF3IP3-213ENST00000478359 IDI1Q13907 227 aa16.81■□□□□ 0.28
TRAF3IP3-213ENST00000478359 CNGB1Q14028 1251 aaPredicted RBP16.81■□□□□ 0.28
TRAF3IP3-213ENST00000478359 PUS7Q96PZ0 661 aaKnown RBP16.8■□□□□ 0.28
TRAF3IP3-213ENST00000478359 QRICH2Q9H0J4 1663 aa16.79■□□□□ 0.28
TRAF3IP3-213ENST00000478359 SMG6Q86US8 1419 aaKnown RBP16.77■□□□□ 0.28
TRAF3IP3-213ENST00000478359 SPATA31D1Q6ZQQ2 1576 aa16.77■□□□□ 0.28
TRAF3IP3-213ENST00000478359 CLTCQ00610 1675 aaKnown RBP16.77■□□□□ 0.28
TRAF3IP3-213ENST00000478359 CC2D1BQ5T0F9 858 aaKnown RBP16.77■□□□□ 0.27
TRAF3IP3-213ENST00000478359 AMER1Q5JTC6 1135 aaPredicted RBP16.75■□□□□ 0.27
TRAF3IP3-213ENST00000478359 ARHGEF28Q8N1W1 1705 aaKnown RBP16.74■□□□□ 0.27
TRAF3IP3-213ENST00000478359 MYO5BQ9ULV0 1848 aa16.74■□□□□ 0.27
TRAF3IP3-213ENST00000478359 TRAK1Q9UPV9 953 aa16.73■□□□□ 0.27
TRAF3IP3-213ENST00000478359 NUDCQ9Y266 331 aa16.73■□□□□ 0.27
TRAF3IP3-213ENST00000478359 PDE3BQ13370 1112 aa16.72■□□□□ 0.27
TRAF3IP3-213ENST00000478359 ESF1Q9H501 851 aaKnown RBP16.71■□□□□ 0.27
TRAF3IP3-213ENST00000478359 EVC2Q86UK5 1308 aa16.71■□□□□ 0.26
TRAF3IP3-213ENST00000478359 BLMP54132 1417 aaPredicted RBP16.7■□□□□ 0.26
TRAF3IP3-213ENST00000478359 STAG3Q9UJ98 1225 aa16.7■□□□□ 0.26
TRAF3IP3-213ENST00000478359 USP32Q8NFA0 1604 aa16.69■□□□□ 0.26
TRAF3IP3-213ENST00000478359 PPP2R1AP30153 589 aa16.69■□□□□ 0.26
TRAF3IP3-213ENST00000478359 TMEM132EQ6IEE7 984 aa16.69■□□□□ 0.26
TRAF3IP3-213ENST00000478359 NINLQ9Y2I6 1382 aa16.68■□□□□ 0.26
TRAF3IP3-213ENST00000478359 FBXO31Q5XUX0 539 aaPredicted RBP16.67■□□□□ 0.26
TRAF3IP3-213ENST00000478359 A2ML1A8K2U0 1454 aa16.66■□□□□ 0.26
TRAF3IP3-213ENST00000478359 ALKQ9UM73 1620 aa16.65■□□□□ 0.26
TRAF3IP3-213ENST00000478359 YTHDC2Q9H6S0 1430 aaKnown RBP16.64■□□□□ 0.25
TRAF3IP3-213ENST00000478359 HDGFP51858 240 aaKnown RBP16.64■□□□□ 0.25
TRAF3IP3-213ENST00000478359 WDR43Q15061 677 aaKnown RBP eCLIP16.64■□□□□ 0.25
TRAF3IP3-213ENST00000478359 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.64■□□□□ 0.25
TRAF3IP3-213ENST00000478359 ZMYM3Q14202 1370 aa16.63■□□□□ 0.25
TRAF3IP3-213ENST00000478359 NUTM2DQ5VT03 806 aaPredicted RBP16.63■□□□□ 0.25
TRAF3IP3-213ENST00000478359 BCANQ96GW7 911 aa16.63■□□□□ 0.25
TRAF3IP3-213ENST00000478359 TULP4Q9NRJ4 1543 aa16.63■□□□□ 0.25
TRAF3IP3-213ENST00000478359 NSD2O96028 1365 aa16.63■□□□□ 0.25
TRAF3IP3-213ENST00000478359 DLC1Q96QB1 1528 aa16.62■□□□□ 0.25
TRAF3IP3-213ENST00000478359 PTPRMP28827 1452 aa16.62■□□□□ 0.25
TRAF3IP3-213ENST00000478359 RIMS2Q9UQ26 1411 aa16.62■□□□□ 0.25
TRAF3IP3-213ENST00000478359 ANKRD36BQ8N2N9 1353 aa16.61■□□□□ 0.25
TRAF3IP3-213ENST00000478359 RNF123Q5XPI4 1314 aa16.61■□□□□ 0.25
TRAF3IP3-213ENST00000478359 CARD14Q9BXL6 1004 aa16.61■□□□□ 0.25
TRAF3IP3-213ENST00000478359 ATAD2Q6PL18 1390 aa16.61■□□□□ 0.25
TRAF3IP3-213ENST00000478359 MLECQ14165 292 aa16.61■□□□□ 0.25
TRAF3IP3-213ENST00000478359 PPP4R2Q9NY27 417 aa16.61■□□□□ 0.25
TRAF3IP3-213ENST00000478359 NSD3Q9BZ95 1437 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms