RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 NKTRP30414 1462 aaKnown RBP21.98■■□□□ 1.11
SMARCE1-209ENST00000478349 SOCS7O14512 581 aa21.98■■□□□ 1.11
SMARCE1-209ENST00000478349 ILDR2Q71H61 639 aa21.98■■□□□ 1.11
SMARCE1-209ENST00000478349 SLC26A8Q96RN1 970 aa21.98■■□□□ 1.11
SMARCE1-209ENST00000478349 PLEKHG1Q9ULL1 1385 aa21.98■■□□□ 1.11
SMARCE1-209ENST00000478349 RIMS2Q9UQ26 1411 aa21.97■■□□□ 1.11
SMARCE1-209ENST00000478349 ALKQ9UM73 1620 aa21.96■■□□□ 1.11
SMARCE1-209ENST00000478349 CHGAP10645 457 aaKnown RBP21.96■■□□□ 1.11
SMARCE1-209ENST00000478349 TMEM94Q12767 1356 aa21.96■■□□□ 1.11
SMARCE1-209ENST00000478349 ZFYVE9O95405 1425 aa21.96■■□□□ 1.11
SMARCE1-209ENST00000478349 PROSER2Q86WR7 435 aaPredicted RBP21.94■■□□□ 1.1
SMARCE1-209ENST00000478349 MED1Q15648 1581 aaPredicted RBP21.93■■□□□ 1.1
SMARCE1-209ENST00000478349 NWD1Q149M9 1564 aa21.92■■□□□ 1.1
SMARCE1-209ENST00000478349 PPARGC1BQ86YN6 1023 aaKnown RBP21.92■■□□□ 1.1
SMARCE1-209ENST00000478349 TMEM131LA2VDJ0 1609 aa21.91■■□□□ 1.1
SMARCE1-209ENST00000478349 E9PCH4 1651 aa21.91■■□□□ 1.1
SMARCE1-209ENST00000478349 MSH6P52701 1360 aa21.9■■□□□ 1.1
SMARCE1-209ENST00000478349 RRBP1Q9P2E9 1410 aaKnown RBP21.89■■□□□ 1.1
SMARCE1-209ENST00000478349 FAM135BQ49AJ0 1406 aa21.89■■□□□ 1.09
SMARCE1-209ENST00000478349 TBX22Q9Y458 520 aa21.88■■□□□ 1.09
SMARCE1-209ENST00000478349 DIP2AQ14689 1571 aa21.87■■□□□ 1.09
SMARCE1-209ENST00000478349 PIK3R4Q99570 1358 aa21.86■■□□□ 1.09
SMARCE1-209ENST00000478349 NCOA3Q9Y6Q9 1424 aa21.84■■□□□ 1.09
SMARCE1-209ENST00000478349 XIRP1Q702N8 1843 aaKnown RBP21.81■■□□□ 1.08
SMARCE1-209ENST00000478349 C14orf37Q86TY3 774 aa21.81■■□□□ 1.08
SMARCE1-209ENST00000478349 TRPM2O94759 1503 aa21.8■■□□□ 1.08
SMARCE1-209ENST00000478349 NAIPQ13075 1403 aa21.79■■□□□ 1.08
SMARCE1-209ENST00000478349 ADAMTS13Q76LX8 1427 aa21.79■■□□□ 1.08
SMARCE1-209ENST00000478349 MYO5BQ9ULV0 1848 aa21.78■■□□□ 1.08
SMARCE1-209ENST00000478349 ZNF326Q5BKZ1 582 aaKnown RBP21.78■■□□□ 1.08
SMARCE1-209ENST00000478349 NUTM2DQ5VT03 806 aaPredicted RBP21.77■■□□□ 1.08
SMARCE1-209ENST00000478349 RBM33Q96EV2 1170 aaKnown RBP21.77■■□□□ 1.08
SMARCE1-209ENST00000478349 SPHKAPQ2M3C7 1700 aa21.77■■□□□ 1.08
SMARCE1-209ENST00000478349 HFM1A2PYH4 1435 aa21.76■■□□□ 1.07
SMARCE1-209ENST00000478349 SLAIN2Q9P270 581 aa21.76■■□□□ 1.07
SMARCE1-209ENST00000478349 CHD2O14647 1828 aaKnown RBP21.74■■□□□ 1.07
SMARCE1-209ENST00000478349 CADPS2Q86UW7 1296 aa21.74■■□□□ 1.07
SMARCE1-209ENST00000478349 ROBO1Q9Y6N7 1651 aa21.74■■□□□ 1.07
SMARCE1-209ENST00000478349 ATF3P18847 181 aa21.72■■□□□ 1.07
SMARCE1-209ENST00000478349 TRIM52Q96A61 297 aa21.72■■□□□ 1.07
SMARCE1-209ENST00000478349 SETBP1Q9Y6X0 1596 aa21.71■■□□□ 1.07
SMARCE1-209ENST00000478349 C19orf44Q9H6X5 657 aa21.71■■□□□ 1.07
SMARCE1-209ENST00000478349 AMOTL2Q9Y2J4 779 aa21.7■■□□□ 1.06
SMARCE1-209ENST00000478349 DCCP43146 1447 aa21.68■■□□□ 1.06
SMARCE1-209ENST00000478349 SLC4A1APQ9BWU0 796 aaKnown RBP21.67■■□□□ 1.06
SMARCE1-209ENST00000478349 JCADQ9P266 1359 aa21.66■■□□□ 1.06
SMARCE1-209ENST00000478349 CLTCL1P53675 1640 aa21.66■■□□□ 1.06
SMARCE1-209ENST00000478349 VGFO15240 615 aaPredicted RBP21.64■■□□□ 1.05
SMARCE1-209ENST00000478349 ACIN1Q9UKV3 1341 aaKnown RBP21.63■■□□□ 1.05
SMARCE1-209ENST00000478349 NEXMIFQ5QGS0 1516 aa21.63■■□□□ 1.05
SMARCE1-209ENST00000478349 PTPRUQ92729 1446 aa21.63■■□□□ 1.05
SMARCE1-209ENST00000478349 RPGRIP1LQ68CZ1 1315 aa21.62■■□□□ 1.05
SMARCE1-209ENST00000478349 PHLPP1O60346 1717 aa21.61■■□□□ 1.05
SMARCE1-209ENST00000478349 NRXN3Q9Y4C0 1643 aa21.61■■□□□ 1.05
SMARCE1-209ENST00000478349 XRN1Q8IZH2 1706 aaKnown RBP21.6■■□□□ 1.05
SMARCE1-209ENST00000478349 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.59■■□□□ 1.05
SMARCE1-209ENST00000478349 KIF1BO60333 1816 aa21.59■■□□□ 1.05
SMARCE1-209ENST00000478349 METP08581 1390 aa21.59■■□□□ 1.05
SMARCE1-209ENST00000478349 SPATA31A6Q5VVP1 1343 aa21.57■■□□□ 1.04
SMARCE1-209ENST00000478349 AHDC1Q5TGY3 1603 aaPredicted RBP21.57■■□□□ 1.04
SMARCE1-209ENST00000478349 ADGRL3Q9HAR2 1447 aa21.56■■□□□ 1.04
SMARCE1-209ENST00000478349 CCDC144AA2RUR9 1427 aa21.55■■□□□ 1.04
SMARCE1-209ENST00000478349 COL16A1Q07092 1604 aaPredicted RBP21.55■■□□□ 1.04
SMARCE1-209ENST00000478349 PTCH1Q13635 1447 aa21.55■■□□□ 1.04
SMARCE1-209ENST00000478349 BRINP3Q76B58 766 aa21.53■■□□□ 1.04
SMARCE1-209ENST00000478349 MEX3CQ5U5Q3 659 aaKnown RBP21.52■■□□□ 1.04
SMARCE1-209ENST00000478349 RGS17Q9UGC6 210 aaPredicted RBP21.52■■□□□ 1.04
SMARCE1-209ENST00000478349 MST1RQ04912 1400 aa21.51■■□□□ 1.03
SMARCE1-209ENST00000478349 ASXL1Q8IXJ9 1541 aa21.5■■□□□ 1.03
SMARCE1-209ENST00000478349 PRAG1Q86YV5 1406 aa21.49■■□□□ 1.03
SMARCE1-209ENST00000478349 ANKRD30BQ9BXX2 1392 aa21.48■■□□□ 1.03
SMARCE1-209ENST00000478349 MPHOSPH9Q99550 1183 aa21.46■■□□□ 1.03
SMARCE1-209ENST00000478349 SHPRHQ149N8 1683 aa21.45■■□□□ 1.02
SMARCE1-209ENST00000478349 ZNF772Q68DY9 489 aaPredicted RBP21.45■■□□□ 1.02
SMARCE1-209ENST00000478349 LRRC59Q96AG4 307 aaKnown RBP21.45■■□□□ 1.02
SMARCE1-209ENST00000478349 SETD5Q9C0A6 1442 aa21.45■■□□□ 1.02
SMARCE1-209ENST00000478349 POTEAQ6S8J7 498 aa21.44■■□□□ 1.02
SMARCE1-209ENST00000478349 ROBO2Q9HCK4 1378 aa21.42■■□□□ 1.02
SMARCE1-209ENST00000478349 PPLO60437 1756 aa21.41■■□□□ 1.02
SMARCE1-209ENST00000478349 NALCNQ8IZF0 1738 aa21.41■■□□□ 1.02
SMARCE1-209ENST00000478349 LRP6O75581 1613 aa21.4■■□□□ 1.02
SMARCE1-209ENST00000478349 C1orf167Q5SNV9 1468 aa21.4■■□□□ 1.02
SMARCE1-209ENST00000478349 SPATA31E1Q6ZUB1 1445 aa21.39■■□□□ 1.02
SMARCE1-209ENST00000478349 SETD1AO15047 1707 aaKnown RBP21.39■■□□□ 1.01
SMARCE1-209ENST00000478349 RGL3Q3MIN7 710 aa21.39■■□□□ 1.01
SMARCE1-209ENST00000478349 NHSL1Q5SYE7 1610 aa21.39■■□□□ 1.01
SMARCE1-209ENST00000478349 NUTM2BA6NNL0 878 aaPredicted RBP21.37■■□□□ 1.01
SMARCE1-209ENST00000478349 NUTM2EB1AL46 878 aaPredicted RBP21.37■■□□□ 1.01
SMARCE1-209ENST00000478349 NUTM2AQ8IVF1 878 aaPredicted RBP21.37■■□□□ 1.01
SMARCE1-209ENST00000478349 ADGRF5Q8IZF2 1346 aa21.35■■□□□ 1.01
SMARCE1-209ENST00000478349 TECPR2O15040 1411 aa21.35■■□□□ 1.01
SMARCE1-209ENST00000478349 CDC42BPGQ6DT37 1551 aa21.35■■□□□ 1.01
SMARCE1-209ENST00000478349 LRPPRCP42704 1394 aaKnown RBP21.34■■□□□ 1.01
SMARCE1-209ENST00000478349 PNPLA6Q8IY17 1366 aa21.34■■□□□ 1.01
SMARCE1-209ENST00000478349 PIK3C2GO75747 1445 aa21.33■■□□□ 1.01
SMARCE1-209ENST00000478349 ABCC11Q96J66 1382 aa21.31■■□□□ 1
SMARCE1-209ENST00000478349 NPHP3Q7Z494 1330 aa21.3■■□□□ 1
SMARCE1-209ENST00000478349 STK26Q9P289 416 aa21.3■■□□□ 1
SMARCE1-209ENST00000478349 RAB3GAP2Q9H2M9 1393 aa21.3■■□□□ 1
SMARCE1-209ENST00000478349 SOS2Q07890 1332 aaPredicted RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms