RNA–Protein interactions for RNA: ENST00000478327.1

NECTIN3-204, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 4

Gene NECTIN3, Length 549 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-204ENST00000478327 TMEM134Q9H6X4 195 aa8.85□□□□□ -0.99
NECTIN3-204ENST00000478327 FAM217BQ9NTX9 383 aaPredicted RBP8.85□□□□□ -0.99
NECTIN3-204ENST00000478327 C3orf80F5H4A9 247 aa8.84□□□□□ -0.99
NECTIN3-204ENST00000478327 BHMG1C9JSJ3 638 aaPredicted RBP8.83□□□□□ -1
NECTIN3-204ENST00000478327 FAM98CQ17RN3 349 aaKnown RBP8.83□□□□□ -1
NECTIN3-204ENST00000478327 MS4A1P11836 297 aa8.82□□□□□ -1
NECTIN3-204ENST00000478327 SSTR3P32745 418 aaPredicted RBP8.82□□□□□ -1
NECTIN3-204ENST00000478327 SULF1Q8IWU6 871 aa8.82□□□□□ -1
NECTIN3-204ENST00000478327 FAM117AQ9C073 453 aa8.82□□□□□ -1
NECTIN3-204ENST00000478327 SMAPO00193 183 aa8.8□□□□□ -1
NECTIN3-204ENST00000478327 NLRP7Q8WX94 980 aa8.8□□□□□ -1
NECTIN3-204ENST00000478327 GOPCQ9HD26 462 aa8.8□□□□□ -1
NECTIN3-204ENST00000478327 PLEKHG3A1L390 1219 aa8.79□□□□□ -1
NECTIN3-204ENST00000478327 IL27Q8NEV9 243 aa8.79□□□□□ -1
NECTIN3-204ENST00000478327 SLC4A3P48751 1232 aa8.78□□□□□ -1
NECTIN3-204ENST00000478327 HDGFP51858 240 aaKnown RBP8.78□□□□□ -1
NECTIN3-204ENST00000478327 SEPT9Q9UHD8 586 aaPredicted RBP8.78□□□□□ -1
NECTIN3-204ENST00000478327 CD46P15529 392 aa8.77□□□□□ -1.01
NECTIN3-204ENST00000478327 DIXDC1Q155Q3 683 aa8.77□□□□□ -1.01
NECTIN3-204ENST00000478327 RSPH4AQ5TD94 716 aa8.77□□□□□ -1.01
NECTIN3-204ENST00000478327 MRPL50Q8N5N7 158 aaKnown RBP8.77□□□□□ -1.01
NECTIN3-204ENST00000478327 STAC3Q96MF2 364 aa8.77□□□□□ -1.01
NECTIN3-204ENST00000478327 BEGAINQ9BUH8 593 aa8.76□□□□□ -1.01
NECTIN3-204ENST00000478327 RSPH6AQ9H0K4 717 aa8.76□□□□□ -1.01
NECTIN3-204ENST00000478327 SH3D19Q5HYK7 790 aa8.75□□□□□ -1.01
NECTIN3-204ENST00000478327 SWT1Q5T5J6 900 aaKnown RBP8.75□□□□□ -1.01
NECTIN3-204ENST00000478327 SLF2Q8IX21 1173 aa8.75□□□□□ -1.01
NECTIN3-204ENST00000478327 NECTIN2Q92692 538 aa8.75□□□□□ -1.01
NECTIN3-204ENST00000478327 DDX11L8A8MPP1 907 aa8.74□□□□□ -1.01
NECTIN3-204ENST00000478327 ZFRQ96KR1 1074 aaKnown RBP8.74□□□□□ -1.01
NECTIN3-204ENST00000478327 SAMD7Q7Z3H4 446 aa8.71□□□□□ -1.02
NECTIN3-204ENST00000478327 RDH13Q8NBN7 331 aa8.71□□□□□ -1.02
NECTIN3-204ENST00000478327 HCSTQ9UBK5 93 aa8.71□□□□□ -1.02
NECTIN3-204ENST00000478327 GTF3C3Q9Y5Q9 886 aa8.71□□□□□ -1.02
NECTIN3-204ENST00000478327 SKIV2LQ15477 1246 aaKnown RBP8.7□□□□□ -1.02
NECTIN3-204ENST00000478327 ANKK1Q8NFD2 765 aa8.7□□□□□ -1.02
NECTIN3-204ENST00000478327 KCTD12Q96CX2 325 aaKnown RBP8.7□□□□□ -1.02
NECTIN3-204ENST00000478327 LRCH3Q96II8 777 aa8.7□□□□□ -1.02
NECTIN3-204ENST00000478327 GOLGA8CPA6NN73 597 aa8.69□□□□□ -1.02
NECTIN3-204ENST00000478327 GCGRP47871 477 aa8.69□□□□□ -1.02
NECTIN3-204ENST00000478327 USP46P62068 366 aa8.69□□□□□ -1.02
NECTIN3-204ENST00000478327 THSD4Q6ZMP0 1018 aa8.69□□□□□ -1.02
NECTIN3-204ENST00000478327 PCMTD1Q96MG8 357 aaPredicted RBP8.69□□□□□ -1.02
NECTIN3-204ENST00000478327 TBC1D2Q9BYX2 928 aa8.69□□□□□ -1.02
NECTIN3-204ENST00000478327 SLC10A3P09131 477 aa8.68□□□□□ -1.02
NECTIN3-204ENST00000478327 GJA5P36382 358 aa8.68□□□□□ -1.02
NECTIN3-204ENST00000478327 NUTM1Q86Y26 1132 aa8.68□□□□□ -1.02
NECTIN3-204ENST00000478327 SPIRE2Q8WWL2 714 aa8.68□□□□□ -1.02
NECTIN3-204ENST00000478327 WNT2BQ93097 391 aa8.68□□□□□ -1.02
NECTIN3-204ENST00000478327 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.68□□□□□ -1.02
NECTIN3-204ENST00000478327 TUSC1Q2TAM9 212 aa8.67□□□□□ -1.02
NECTIN3-204ENST00000478327 MYSM1Q5VVJ2 828 aa8.67□□□□□ -1.02
NECTIN3-204ENST00000478327 SOWAHBA6NEL2 793 aa8.66□□□□□ -1.02
NECTIN3-204ENST00000478327 KDM4AO75164 1064 aa8.66□□□□□ -1.02
NECTIN3-204ENST00000478327 ERICH6Q7L0X2 663 aa8.66□□□□□ -1.02
NECTIN3-204ENST00000478327 PRR14Q9BWN1 585 aa8.66□□□□□ -1.02
NECTIN3-204ENST00000478327 CLK2P49760 499 aaKnown RBP8.65□□□□□ -1.02
NECTIN3-204ENST00000478327 KMT5BQ4FZB7 885 aa8.65□□□□□ -1.02
NECTIN3-204ENST00000478327 SPTLC1O15269 473 aa8.64□□□□□ -1.03
NECTIN3-204ENST00000478327 CFHP08603 1231 aa8.63□□□□□ -1.03
NECTIN3-204ENST00000478327 GRIPAP1Q4V328 841 aa8.63□□□□□ -1.03
NECTIN3-204ENST00000478327 TSR3Q9UJK0 312 aaKnown RBP8.63□□□□□ -1.03
NECTIN3-204ENST00000478327 HOXA2O43364 376 aa8.62□□□□□ -1.03
NECTIN3-204ENST00000478327 RNF40O75150 1001 aa8.62□□□□□ -1.03
NECTIN3-204ENST00000478327 RSBN1LQ6PCB5 846 aaPredicted RBP8.62□□□□□ -1.03
NECTIN3-204ENST00000478327 NYAP1Q6ZVC0 841 aa8.62□□□□□ -1.03
NECTIN3-204ENST00000478327 RIC3Q7Z5B4 369 aa8.62□□□□□ -1.03
NECTIN3-204ENST00000478327 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.62□□□□□ -1.03
NECTIN3-204ENST00000478327 ACTN4O43707 911 aaKnown RBP8.61□□□□□ -1.03
NECTIN3-204ENST00000478327 MOXD2PA6NHM9 499 aa8.6□□□□□ -1.03
NECTIN3-204ENST00000478327 PPP4CP60510 307 aa8.6□□□□□ -1.03
NECTIN3-204ENST00000478327 POLR3EQ9NVU0 708 aa8.6□□□□□ -1.03
NECTIN3-204ENST00000478327 HPS5Q9UPZ3 1129 aa8.6□□□□□ -1.03
NECTIN3-204ENST00000478327 ATP6V1AP38606 617 aa8.59□□□□□ -1.03
NECTIN3-204ENST00000478327 BCAMP50895 628 aa8.59□□□□□ -1.03
NECTIN3-204ENST00000478327 PRPF38BQ5VTL8 546 aaKnown RBP8.59□□□□□ -1.03
NECTIN3-204ENST00000478327 PTPN5P54829 565 aa8.58□□□□□ -1.04
NECTIN3-204ENST00000478327 FUT2Q10981 343 aa8.58□□□□□ -1.04
NECTIN3-204ENST00000478327 PPP2R2DQ66LE6 453 aa8.58□□□□□ -1.04
NECTIN3-204ENST00000478327 PROCA1Q8NCQ7 364 aaPredicted RBP8.58□□□□□ -1.04
NECTIN3-204ENST00000478327 LIMD1Q9UGP4 676 aa8.58□□□□□ -1.04
NECTIN3-204ENST00000478327 FDX1P10109 184 aa8.57□□□□□ -1.04
NECTIN3-204ENST00000478327 NDUFV2P19404 249 aa8.56□□□□□ -1.04
NECTIN3-204ENST00000478327 LILRB3O75022 631 aa8.55□□□□□ -1.04
NECTIN3-204ENST00000478327 APLP1P51693 650 aa8.54□□□□□ -1.04
NECTIN3-204ENST00000478327 FLIIQ13045 1269 aa8.54□□□□□ -1.04
NECTIN3-204ENST00000478327 MORN1Q5T089 497 aa8.54□□□□□ -1.04
NECTIN3-204ENST00000478327 IFFO2Q5TF58 517 aa8.54□□□□□ -1.04
NECTIN3-204ENST00000478327 ZBTB3Q9H5J0 574 aa8.54□□□□□ -1.04
NECTIN3-204ENST00000478327 ATP1B4Q9UN42 357 aaPredicted RBP8.54□□□□□ -1.04
NECTIN3-204ENST00000478327 SPDYE5A6NIY4 337 aa8.53□□□□□ -1.04
NECTIN3-204ENST00000478327 Q3C1V9 767 aa8.53□□□□□ -1.04
NECTIN3-204ENST00000478327 TMEM259Q4ZIN3 620 aa8.53□□□□□ -1.04
NECTIN3-204ENST00000478327 WBP1LQ9NX94 342 aa8.53□□□□□ -1.04
NECTIN3-204ENST00000478327 PLA2G2EQ9NZK7 142 aa8.53□□□□□ -1.04
NECTIN3-204ENST00000478327 BANK1Q8NDB2 785 aa8.52□□□□□ -1.05
NECTIN3-204ENST00000478327 PCDHGC3Q9UN70 934 aa8.52□□□□□ -1.05
NECTIN3-204ENST00000478327 TIMELESSQ9UNS1 1208 aa8.52□□□□□ -1.05
NECTIN3-204ENST00000478327 SALL2Q9Y467 1007 aaPredicted RBP8.52□□□□□ -1.05
NECTIN3-204ENST00000478327 PCDHB15Q9Y5E8 787 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms