RNA–Protein interactions for RNA: ENST00000477563.6

RBBP4-211, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 5

Gene RBBP4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-211ENST00000477563 KANK4Q5T7N3 995 aaPredicted RBP12.13□□□□□ -0.47
RBBP4-211ENST00000477563 EID1Q9Y6B2 187 aa12.13□□□□□ -0.47
RBBP4-211ENST00000477563 KIF15Q9NS87 1388 aa12.13□□□□□ -0.47
RBBP4-211ENST00000477563 ABCC5O15440 1437 aa12.12□□□□□ -0.47
RBBP4-211ENST00000477563 EFCAB6Q5THR3 1501 aa12.12□□□□□ -0.47
RBBP4-211ENST00000477563 NWD1Q149M9 1564 aa12.12□□□□□ -0.47
RBBP4-211ENST00000477563 ROBO1Q9Y6N7 1651 aa12.12□□□□□ -0.47
RBBP4-211ENST00000477563 PTPN23Q9H3S7 1636 aa12.11□□□□□ -0.47
RBBP4-211ENST00000477563 KCNA6P17658 529 aa12.1□□□□□ -0.47
RBBP4-211ENST00000477563 NOS1P29475 1434 aa12.1□□□□□ -0.47
RBBP4-211ENST00000477563 NKTRP30414 1462 aaKnown RBP12.09□□□□□ -0.47
RBBP4-211ENST00000477563 TMEM94Q12767 1356 aa12.09□□□□□ -0.47
RBBP4-211ENST00000477563 ABCB7O75027 752 aa12.09□□□□□ -0.47
RBBP4-211ENST00000477563 IDI1Q13907 227 aa12.09□□□□□ -0.47
RBBP4-211ENST00000477563 ADGRB3O60242 1522 aa12.08□□□□□ -0.48
RBBP4-211ENST00000477563 CHD2O14647 1828 aaKnown RBP12.08□□□□□ -0.48
RBBP4-211ENST00000477563 DAPK1P53355 1430 aa12.08□□□□□ -0.48
RBBP4-211ENST00000477563 KANK1Q14678 1352 aa12.07□□□□□ -0.48
RBBP4-211ENST00000477563 RRP7BPQ9NSQ0 103 aa12.07□□□□□ -0.48
RBBP4-211ENST00000477563 ZBTB22O15209 634 aa12.06□□□□□ -0.48
RBBP4-211ENST00000477563 POTEAQ6S8J7 498 aa12.06□□□□□ -0.48
RBBP4-211ENST00000477563 SLC52A1Q9NWF4 448 aa12.05□□□□□ -0.48
RBBP4-211ENST00000477563 RPRD2Q5VT52 1461 aaKnown RBP12.05□□□□□ -0.48
RBBP4-211ENST00000477563 PHLPP1O60346 1717 aa12.05□□□□□ -0.48
RBBP4-211ENST00000477563 PROSER2Q86WR7 435 aaPredicted RBP12.04□□□□□ -0.48
RBBP4-211ENST00000477563 STAG3Q9UJ98 1225 aa12.04□□□□□ -0.48
RBBP4-211ENST00000477563 MYO5BQ9ULV0 1848 aa12.04□□□□□ -0.48
RBBP4-211ENST00000477563 ANKRD30AQ9BXX3 1397 aa12.04□□□□□ -0.48
RBBP4-211ENST00000477563 ZFYVE9O95405 1425 aa12.03□□□□□ -0.48
RBBP4-211ENST00000477563 FGD6Q6ZV73 1430 aa12.03□□□□□ -0.48
RBBP4-211ENST00000477563 NCOA3Q9Y6Q9 1424 aa12.03□□□□□ -0.48
RBBP4-211ENST00000477563 ADGRL2O95490 1459 aa12.03□□□□□ -0.48
RBBP4-211ENST00000477563 COL16A1Q07092 1604 aaPredicted RBP12.02□□□□□ -0.49
RBBP4-211ENST00000477563 SLC26A8Q96RN1 970 aa12.02□□□□□ -0.49
RBBP4-211ENST00000477563 MSH6P52701 1360 aa12.02□□□□□ -0.49
RBBP4-211ENST00000477563 TMEM131LA2VDJ0 1609 aa12.01□□□□□ -0.49
RBBP4-211ENST00000477563 SLAIN2Q9P270 581 aa12.01□□□□□ -0.49
RBBP4-211ENST00000477563 JCADQ9P266 1359 aa12.01□□□□□ -0.49
RBBP4-211ENST00000477563 PLEKHG1Q9ULL1 1385 aa12.01□□□□□ -0.49
RBBP4-211ENST00000477563 GCC2Q8IWJ2 1684 aa12□□□□□ -0.49
RBBP4-211ENST00000477563 SETD1AO15047 1707 aaKnown RBP12□□□□□ -0.49
RBBP4-211ENST00000477563 LOC105371045A0A1W2PR82 267 aa11.99□□□□□ -0.49
RBBP4-211ENST00000477563 SHPRHQ149N8 1683 aa11.98□□□□□ -0.49
RBBP4-211ENST00000477563 AHDC1Q5TGY3 1603 aaPredicted RBP11.98□□□□□ -0.49
RBBP4-211ENST00000477563 DIP2AQ14689 1571 aa11.98□□□□□ -0.49
RBBP4-211ENST00000477563 RBM33Q96EV2 1170 aaKnown RBP11.98□□□□□ -0.49
RBBP4-211ENST00000477563 TBX22Q9Y458 520 aa11.98□□□□□ -0.49
RBBP4-211ENST00000477563 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.97□□□□□ -0.49
RBBP4-211ENST00000477563 HDGFP51858 240 aaKnown RBP11.97□□□□□ -0.49
RBBP4-211ENST00000477563 RIMS2Q9UQ26 1411 aa11.96□□□□□ -0.49
RBBP4-211ENST00000477563 PIK3R4Q99570 1358 aa11.96□□□□□ -0.49
RBBP4-211ENST00000477563 SPATA31A6Q5VVP1 1343 aa11.96□□□□□ -0.49
RBBP4-211ENST00000477563 ATF5Q9Y2D1 282 aaPredicted RBP11.96□□□□□ -0.49
RBBP4-211ENST00000477563 UNC13BO14795 1591 aa11.96□□□□□ -0.5
RBBP4-211ENST00000477563 ADAMTS13Q76LX8 1427 aa11.95□□□□□ -0.5
RBBP4-211ENST00000477563 ANKRD50Q9ULJ7 1429 aa11.95□□□□□ -0.5
RBBP4-211ENST00000477563 CHIC2Q9UKJ5 165 aa11.95□□□□□ -0.5
RBBP4-211ENST00000477563 LRP6O75581 1613 aa11.95□□□□□ -0.5
RBBP4-211ENST00000477563 E9PCH4 1651 aa11.94□□□□□ -0.5
RBBP4-211ENST00000477563 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.93□□□□□ -0.5
RBBP4-211ENST00000477563 C19orf44Q9H6X5 657 aa11.93□□□□□ -0.5
RBBP4-211ENST00000477563 POLA2Q14181 598 aa11.92□□□□□ -0.5
RBBP4-211ENST00000477563 ZNF772Q68DY9 489 aaPredicted RBP11.92□□□□□ -0.5
RBBP4-211ENST00000477563 CADPS2Q86UW7 1296 aa11.92□□□□□ -0.5
RBBP4-211ENST00000477563 IQGAP3Q86VI3 1631 aa11.91□□□□□ -0.5
RBBP4-211ENST00000477563 BCANQ96GW7 911 aa11.91□□□□□ -0.5
RBBP4-211ENST00000477563 DCCP43146 1447 aa11.91□□□□□ -0.5
RBBP4-211ENST00000477563 TRPM2O94759 1503 aa11.91□□□□□ -0.5
RBBP4-211ENST00000477563 CDK12Q9NYV4 1490 aaPredicted RBP11.9□□□□□ -0.5
RBBP4-211ENST00000477563 UPF1Q92900 1129 aaKnown RBP eCLIP11.9□□□□□ -0.5
RBBP4-211ENST00000477563 NHSL1Q5SYE7 1610 aa11.89□□□□□ -0.51
RBBP4-211ENST00000477563 PPP1R15AO75807 674 aaPredicted RBP11.89□□□□□ -0.51
RBBP4-211ENST00000477563 XRN1Q8IZH2 1706 aaKnown RBP11.89□□□□□ -0.51
RBBP4-211ENST00000477563 PTPRUQ92729 1446 aa11.88□□□□□ -0.51
RBBP4-211ENST00000477563 NRXN3Q9Y4C0 1643 aa11.88□□□□□ -0.51
RBBP4-211ENST00000477563 SETBP1Q9Y6X0 1596 aa11.88□□□□□ -0.51
RBBP4-211ENST00000477563 SETD5Q9C0A6 1442 aa11.87□□□□□ -0.51
RBBP4-211ENST00000477563 ATF3P18847 181 aa11.87□□□□□ -0.51
RBBP4-211ENST00000477563 BRINP3Q76B58 766 aa11.87□□□□□ -0.51
RBBP4-211ENST00000477563 ROCK1Q13464 1354 aa11.87□□□□□ -0.51
RBBP4-211ENST00000477563 SRCAPQ6ZRS2 3230 aa11.86□□□□□ -0.51
RBBP4-211ENST00000477563 ASXL1Q8IXJ9 1541 aa11.86□□□□□ -0.51
RBBP4-211ENST00000477563 AMOTL2Q9Y2J4 779 aa11.85□□□□□ -0.51
RBBP4-211ENST00000477563 MST1RQ04912 1400 aa11.85□□□□□ -0.51
RBBP4-211ENST00000477563 RXRBP28702 533 aa11.84□□□□□ -0.51
RBBP4-211ENST00000477563 MEX3CQ5U5Q3 659 aaKnown RBP11.84□□□□□ -0.51
RBBP4-211ENST00000477563 LAMC1P11047 1609 aa11.84□□□□□ -0.51
RBBP4-211ENST00000477563 SPHKAPQ2M3C7 1700 aa11.83□□□□□ -0.52
RBBP4-211ENST00000477563 ATXN8OSP0DMR3 200 aa11.83□□□□□ -0.52
RBBP4-211ENST00000477563 FAM50AQ14320 339 aaKnown RBP11.83□□□□□ -0.52
RBBP4-211ENST00000477563 C14orf37Q86TY3 774 aa11.83□□□□□ -0.52
RBBP4-211ENST00000477563 CHGAP10645 457 aaKnown RBP11.82□□□□□ -0.52
RBBP4-211ENST00000477563 NUTM2DQ5VT03 806 aaPredicted RBP11.82□□□□□ -0.52
RBBP4-211ENST00000477563 TRIM52Q96A61 297 aa11.82□□□□□ -0.52
RBBP4-211ENST00000477563 NALCNQ8IZF0 1738 aa11.8□□□□□ -0.52
RBBP4-211ENST00000477563 LRRC59Q96AG4 307 aaKnown RBP11.8□□□□□ -0.52
RBBP4-211ENST00000477563 AFF2P51816 1311 aa11.8□□□□□ -0.52
RBBP4-211ENST00000477563 EP400Q96L91 3159 aa11.79□□□□□ -0.52
RBBP4-211ENST00000477563 ADGRL3Q9HAR2 1447 aa11.79□□□□□ -0.52
RBBP4-211ENST00000477563 NUP155O75694 1391 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms