RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 SLC52A1Q9NWF4 448 aa22.43■■□□□ 1.18
SEC13-215ENST00000477547 IFT172Q9UG01 1749 aa22.42■■□□□ 1.18
SEC13-215ENST00000477547 NEURL4Q96JN8 1562 aa22.41■■□□□ 1.18
SEC13-215ENST00000477547 IDI1Q13907 227 aa22.4■■□□□ 1.18
SEC13-215ENST00000477547 PPLO60437 1756 aa22.4■■□□□ 1.18
SEC13-215ENST00000477547 CPS1P31327 1500 aa22.39■■□□□ 1.17
SEC13-215ENST00000477547 PHF23Q9BUL5 403 aaPredicted RBP22.38■■□□□ 1.17
SEC13-215ENST00000477547 SENP3Q9H4L4 574 aaPredicted RBP22.35■■□□□ 1.17
SEC13-215ENST00000477547 STAG3Q9UJ98 1225 aa22.35■■□□□ 1.17
SEC13-215ENST00000477547 SPATA31E1Q6ZUB1 1445 aa22.35■■□□□ 1.17
SEC13-215ENST00000477547 SLIT1O75093 1534 aa22.35■■□□□ 1.17
SEC13-215ENST00000477547 CHGAP10645 457 aaKnown RBP22.34■■□□□ 1.17
SEC13-215ENST00000477547 CCER1Q8TC90 406 aaPredicted RBP22.34■■□□□ 1.17
SEC13-215ENST00000477547 NEXMIFQ5QGS0 1516 aa22.34■■□□□ 1.17
SEC13-215ENST00000477547 ALKQ9UM73 1620 aa22.33■■□□□ 1.17
SEC13-215ENST00000477547 ARHGAP23Q9P227 1491 aa22.33■■□□□ 1.16
SEC13-215ENST00000477547 CLSPNQ9HAW4 1339 aa22.3■■□□□ 1.16
SEC13-215ENST00000477547 ZFYVE9O95405 1425 aa22.28■■□□□ 1.16
SEC13-215ENST00000477547 RIMS2Q9UQ26 1411 aa22.28■■□□□ 1.16
SEC13-215ENST00000477547 TMEM2Q9UHN6 1383 aa22.28■■□□□ 1.16
SEC13-215ENST00000477547 ANKLE2Q86XL3 938 aa22.28■■□□□ 1.16
SEC13-215ENST00000477547 THEMISQ8N1K5 641 aaPredicted RBP22.28■■□□□ 1.16
SEC13-215ENST00000477547 SCAF11Q99590 1463 aaKnown RBP22.27■■□□□ 1.16
SEC13-215ENST00000477547 SIN3AQ96ST3 1273 aa22.27■■□□□ 1.16
SEC13-215ENST00000477547 IQGAP1P46940 1657 aa22.26■■□□□ 1.15
SEC13-215ENST00000477547 ZNF326Q5BKZ1 582 aaKnown RBP22.26■■□□□ 1.15
SEC13-215ENST00000477547 NPHP4O75161 1426 aaPredicted RBP22.24■■□□□ 1.15
SEC13-215ENST00000477547 NEUROD1Q13562 356 aa22.23■■□□□ 1.15
SEC13-215ENST00000477547 MYOM2P54296 1465 aa22.23■■□□□ 1.15
SEC13-215ENST00000477547 RGL3Q3MIN7 710 aa22.22■■□□□ 1.15
SEC13-215ENST00000477547 STRCP1A6NGW2 1772 aa22.22■■□□□ 1.15
SEC13-215ENST00000477547 NRXN3Q9Y4C0 1643 aa22.2■■□□□ 1.15
SEC13-215ENST00000477547 MED14O60244 1454 aa22.2■■□□□ 1.14
SEC13-215ENST00000477547 TONSLQ96HA7 1378 aa22.19■■□□□ 1.14
SEC13-215ENST00000477547 LAMC1P11047 1609 aa22.18■■□□□ 1.14
SEC13-215ENST00000477547 LRRC7Q96NW7 1537 aa22.18■■□□□ 1.14
SEC13-215ENST00000477547 SETBP1Q9Y6X0 1596 aa22.18■■□□□ 1.14
SEC13-215ENST00000477547 RPGRIP1LQ68CZ1 1315 aa22.18■■□□□ 1.14
SEC13-215ENST00000477547 PPP1R15AO75807 674 aaPredicted RBP22.17■■□□□ 1.14
SEC13-215ENST00000477547 RGS17Q9UGC6 210 aaPredicted RBP22.17■■□□□ 1.14
SEC13-215ENST00000477547 EID1Q9Y6B2 187 aa22.17■■□□□ 1.14
SEC13-215ENST00000477547 SETD1AO15047 1707 aaKnown RBP22.17■■□□□ 1.14
SEC13-215ENST00000477547 DIP2AQ14689 1571 aa22.15■■□□□ 1.14
SEC13-215ENST00000477547 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.15■■□□□ 1.14
SEC13-215ENST00000477547 NRXN1Q9ULB1 1477 aa22.14■■□□□ 1.14
SEC13-215ENST00000477547 LTKP29376 864 aa22.14■■□□□ 1.14
SEC13-215ENST00000477547 NUTM2DQ5VT03 806 aaPredicted RBP22.14■■□□□ 1.14
SEC13-215ENST00000477547 TXNDC2Q86VQ3 553 aa22.14■■□□□ 1.14
SEC13-215ENST00000477547 PLEKHG1Q9ULL1 1385 aa22.14■■□□□ 1.13
SEC13-215ENST00000477547 HDGFP51858 240 aaKnown RBP22.12■■□□□ 1.13
SEC13-215ENST00000477547 PIK3C2GO75747 1445 aa22.12■■□□□ 1.13
SEC13-215ENST00000477547 KIAA1210Q9ULL0 1709 aa22.11■■□□□ 1.13
SEC13-215ENST00000477547 DCAF11Q8TEB1 546 aa22.1■■□□□ 1.13
SEC13-215ENST00000477547 L3MBTL2Q969R5 705 aa22.09■■□□□ 1.13
SEC13-215ENST00000477547 TRPM1Q7Z4N2 1603 aa22.09■■□□□ 1.13
SEC13-215ENST00000477547 VGFO15240 615 aaPredicted RBP22.08■■□□□ 1.13
SEC13-215ENST00000477547 PRAG1Q86YV5 1406 aa22.08■■□□□ 1.12
SEC13-215ENST00000477547 ADGRF5Q8IZF2 1346 aa22.07■■□□□ 1.12
SEC13-215ENST00000477547 KDM2AQ9Y2K7 1162 aa22.06■■□□□ 1.12
SEC13-215ENST00000477547 ADAMTS13Q76LX8 1427 aa22.06■■□□□ 1.12
SEC13-215ENST00000477547 ASXL1Q8IXJ9 1541 aa22.04■■□□□ 1.12
SEC13-215ENST00000477547 BCANQ96GW7 911 aa22.04■■□□□ 1.12
SEC13-215ENST00000477547 CHD2O14647 1828 aaKnown RBP22.03■■□□□ 1.12
SEC13-215ENST00000477547 POTEAQ6S8J7 498 aa22.03■■□□□ 1.12
SEC13-215ENST00000477547 STAC3Q96MF2 364 aa22.03■■□□□ 1.12
SEC13-215ENST00000477547 NWD1Q149M9 1564 aa22.01■■□□□ 1.11
SEC13-215ENST00000477547 KNDC1Q76NI1 1749 aa22.01■■□□□ 1.11
SEC13-215ENST00000477547 XRN1Q8IZH2 1706 aaKnown RBP22.01■■□□□ 1.11
SEC13-215ENST00000477547 XIRP1Q702N8 1843 aaKnown RBP22.01■■□□□ 1.11
SEC13-215ENST00000477547 TIMELESSQ9UNS1 1208 aa22.01■■□□□ 1.11
SEC13-215ENST00000477547 SLC26A8Q96RN1 970 aa21.98■■□□□ 1.11
SEC13-215ENST00000477547 RALGAPBQ86X10 1494 aa21.98■■□□□ 1.11
SEC13-215ENST00000477547 ADGRB1O14514 1584 aa21.97■■□□□ 1.11
SEC13-215ENST00000477547 ARHGEF28Q8N1W1 1705 aaKnown RBP21.94■■□□□ 1.1
SEC13-215ENST00000477547 METP08581 1390 aa21.93■■□□□ 1.1
SEC13-215ENST00000477547 PIK3R4Q99570 1358 aa21.92■■□□□ 1.1
SEC13-215ENST00000477547 FAM135BQ49AJ0 1406 aa21.92■■□□□ 1.1
SEC13-215ENST00000477547 CFAP70Q5T0N1 1121 aa21.92■■□□□ 1.1
SEC13-215ENST00000477547 TBX22Q9Y458 520 aa21.92■■□□□ 1.1
SEC13-215ENST00000477547 NBPF8Q3BBV2 869 aa21.91■■□□□ 1.1
SEC13-215ENST00000477547 C14orf93Q9H972 538 aaKnown RBP21.91■■□□□ 1.1
SEC13-215ENST00000477547 NKTRP30414 1462 aaKnown RBP21.91■■□□□ 1.1
SEC13-215ENST00000477547 PTPRUQ92729 1446 aa21.89■■□□□ 1.1
SEC13-215ENST00000477547 RBM33Q96EV2 1170 aaKnown RBP21.88■■□□□ 1.09
SEC13-215ENST00000477547 ROCK2O75116 1388 aaKnown RBP21.88■■□□□ 1.09
SEC13-215ENST00000477547 YTHDC2Q9H6S0 1430 aaKnown RBP21.88■■□□□ 1.09
SEC13-215ENST00000477547 TMEM94Q12767 1356 aa21.87■■□□□ 1.09
SEC13-215ENST00000477547 ROBO1Q9Y6N7 1651 aa21.86■■□□□ 1.09
SEC13-215ENST00000477547 LRPPRCP42704 1394 aaKnown RBP21.85■■□□□ 1.09
SEC13-215ENST00000477547 TECPR2O15040 1411 aa21.85■■□□□ 1.09
SEC13-215ENST00000477547 PTCH1Q13635 1447 aa21.85■■□□□ 1.09
SEC13-215ENST00000477547 DLC1Q96QB1 1528 aa21.85■■□□□ 1.09
SEC13-215ENST00000477547 TMEM132EQ6IEE7 984 aa21.84■■□□□ 1.09
SEC13-215ENST00000477547 GPRASP1Q5JY77 1395 aa21.84■■□□□ 1.09
SEC13-215ENST00000477547 QRICH2Q9H0J4 1663 aa21.83■■□□□ 1.09
SEC13-215ENST00000477547 NALCNQ8IZF0 1738 aa21.83■■□□□ 1.08
SEC13-215ENST00000477547 NBPF1Q3BBV0 1214 aa21.82■■□□□ 1.08
SEC13-215ENST00000477547 KCNA6P17658 529 aa21.8■■□□□ 1.08
SEC13-215ENST00000477547 PROSER2Q86WR7 435 aaPredicted RBP21.8■■□□□ 1.08
SEC13-215ENST00000477547 AMOTL2Q9Y2J4 779 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms