RNA–Protein interactions for RNA: ENST00000477434.5

PDZRN3-206, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 4

Gene PDZRN3, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-206ENST00000477434 IRF6O14896 467 aa8.96□□□□□ -0.98
PDZRN3-206ENST00000477434 ZMYND10O75800 440 aa8.96□□□□□ -0.98
PDZRN3-206ENST00000477434 SLC4A3P48751 1232 aa8.96□□□□□ -0.98
PDZRN3-206ENST00000477434 PPP4CP60510 307 aa8.96□□□□□ -0.98
PDZRN3-206ENST00000477434 NECTIN2Q92692 538 aa8.96□□□□□ -0.98
PDZRN3-206ENST00000477434 WBP1LQ9NX94 342 aa8.96□□□□□ -0.98
PDZRN3-206ENST00000477434 BARGINQ6ZT62 677 aa8.95□□□□□ -0.98
PDZRN3-206ENST00000477434 RNF40O75150 1001 aa8.94□□□□□ -0.98
PDZRN3-206ENST00000477434 CCDC102AQ96A19 550 aa8.92□□□□□ -0.98
PDZRN3-206ENST00000477434 PHOX2BQ99453 314 aa8.92□□□□□ -0.98
PDZRN3-206ENST00000477434 KRI1Q8N9T8 703 aaKnown RBP8.91□□□□□ -0.98
PDZRN3-206ENST00000477434 DAXXQ9UER7 740 aaPredicted RBP8.9□□□□□ -0.98
PDZRN3-206ENST00000477434 NLRP7Q8WX94 980 aa8.87□□□□□ -0.99
PDZRN3-206ENST00000477434 PRR14Q9BWN1 585 aa8.87□□□□□ -0.99
PDZRN3-206ENST00000477434 PLA2G2EQ9NZK7 142 aa8.87□□□□□ -0.99
PDZRN3-206ENST00000477434 APLP1P51693 650 aa8.86□□□□□ -0.99
PDZRN3-206ENST00000477434 RSPH4AQ5TD94 716 aa8.86□□□□□ -0.99
PDZRN3-206ENST00000477434 SULF1Q8IWU6 871 aa8.86□□□□□ -0.99
PDZRN3-206ENST00000477434 ITGBL1O95965 494 aaPredicted RBP8.85□□□□□ -0.99
PDZRN3-206ENST00000477434 SLC10A3P09131 477 aa8.85□□□□□ -0.99
PDZRN3-206ENST00000477434 ABCC9O60706 1549 aa8.85□□□□□ -0.99
PDZRN3-206ENST00000477434 IFFO2Q5TF58 517 aa8.84□□□□□ -0.99
PDZRN3-206ENST00000477434 DDX11L8A8MPP1 907 aa8.83□□□□□ -1
PDZRN3-206ENST00000477434 CFHP08603 1231 aa8.83□□□□□ -1
PDZRN3-206ENST00000477434 CLCN1P35523 988 aa8.83□□□□□ -1
PDZRN3-206ENST00000477434 MDM2Q00987 491 aaPredicted RBP8.83□□□□□ -1
PDZRN3-206ENST00000477434 KMT5BQ4FZB7 885 aa8.83□□□□□ -1
PDZRN3-206ENST00000477434 AK7Q96M32 723 aa8.83□□□□□ -1
PDZRN3-206ENST00000477434 ACTN4O43707 911 aaKnown RBP8.82□□□□□ -1
PDZRN3-206ENST00000477434 GPCPD1Q9NPB8 672 aa8.82□□□□□ -1
PDZRN3-206ENST00000477434 KCNC4Q03721 635 aa8.81□□□□□ -1
PDZRN3-206ENST00000477434 AMHR2Q16671 573 aa8.81□□□□□ -1
PDZRN3-206ENST00000477434 RDH13Q8NBN7 331 aa8.81□□□□□ -1
PDZRN3-206ENST00000477434 TMUB1Q9BVT8 246 aa8.81□□□□□ -1
PDZRN3-206ENST00000477434 TJAP1Q5JTD0 557 aa8.8□□□□□ -1
PDZRN3-206ENST00000477434 MTRQ99707 1265 aa8.8□□□□□ -1
PDZRN3-206ENST00000477434 TRIM66O15016 1216 aa8.79□□□□□ -1
PDZRN3-206ENST00000477434 IL21Q9HBE4 155 aa8.79□□□□□ -1
PDZRN3-206ENST00000477434 SLC24A3Q9HC58 644 aa8.79□□□□□ -1
PDZRN3-206ENST00000477434 PCDHB3Q9Y5E6 796 aa8.79□□□□□ -1
PDZRN3-206ENST00000477434 CD46P15529 392 aa8.78□□□□□ -1
PDZRN3-206ENST00000477434 GCGRP47871 477 aa8.78□□□□□ -1
PDZRN3-206ENST00000477434 FAM217BQ9NTX9 383 aaPredicted RBP8.78□□□□□ -1
PDZRN3-206ENST00000477434 TTLL12Q14166 644 aaPredicted RBP8.77□□□□□ -1.01
PDZRN3-206ENST00000477434 REPIN1Q9BWE0 567 aaKnown RBP8.76□□□□□ -1.01
PDZRN3-206ENST00000477434 COPS2P61201 443 aa8.75□□□□□ -1.01
PDZRN3-206ENST00000477434 BLOC1S3Q6QNY0 202 aa8.74□□□□□ -1.01
PDZRN3-206ENST00000477434 ZPR1O75312 459 aa8.73□□□□□ -1.01
PDZRN3-206ENST00000477434 SSTR3P32745 418 aaPredicted RBP8.73□□□□□ -1.01
PDZRN3-206ENST00000477434 FUT2Q10981 343 aa8.73□□□□□ -1.01
PDZRN3-206ENST00000477434 GIGYF2Q6Y7W6 1299 aaKnown RBP8.73□□□□□ -1.01
PDZRN3-206ENST00000477434 PARP9Q8IXQ6 854 aa8.73□□□□□ -1.01
PDZRN3-206ENST00000477434 ZNF516Q92618 1163 aa8.73□□□□□ -1.01
PDZRN3-206ENST00000477434 CCDC180Q9P1Z9 1646 aa8.72□□□□□ -1.01
PDZRN3-206ENST00000477434 A0A0G2JS52 829 aa8.72□□□□□ -1.01
PDZRN3-206ENST00000477434 NR1I2O75469 434 aa8.72□□□□□ -1.01
PDZRN3-206ENST00000477434 ATP6V1AP38606 617 aa8.72□□□□□ -1.01
PDZRN3-206ENST00000477434 PDE4DQ08499 809 aa8.72□□□□□ -1.01
PDZRN3-206ENST00000477434 GRIPAP1Q4V328 841 aa8.71□□□□□ -1.02
PDZRN3-206ENST00000477434 KDM4AO75164 1064 aa8.7□□□□□ -1.02
PDZRN3-206ENST00000477434 PUS10Q3MIT2 529 aaKnown RBP8.7□□□□□ -1.02
PDZRN3-206ENST00000477434 MORN1Q5T089 497 aa8.7□□□□□ -1.02
PDZRN3-206ENST00000477434 USP46P62068 366 aa8.69□□□□□ -1.02
PDZRN3-206ENST00000477434 SCUBE3Q8IX30 993 aa8.69□□□□□ -1.02
PDZRN3-206ENST00000477434 NKX2-3Q8TAU0 364 aa8.67□□□□□ -1.02
PDZRN3-206ENST00000477434 MS4A1P11836 297 aa8.66□□□□□ -1.02
PDZRN3-206ENST00000477434 NUTM1Q86Y26 1132 aa8.66□□□□□ -1.02
PDZRN3-206ENST00000477434 SLC27A5Q9Y2P5 690 aa8.66□□□□□ -1.02
PDZRN3-206ENST00000477434 HOXA2O43364 376 aa8.65□□□□□ -1.02
PDZRN3-206ENST00000477434 TLL1O43897 1013 aa8.65□□□□□ -1.02
PDZRN3-206ENST00000477434 TPRNQ4KMQ1 711 aa8.65□□□□□ -1.02
PDZRN3-206ENST00000477434 BEGAINQ9BUH8 593 aa8.65□□□□□ -1.02
PDZRN3-206ENST00000477434 SALL2Q9Y467 1007 aaPredicted RBP8.65□□□□□ -1.02
PDZRN3-206ENST00000477434 RGS20O76081 388 aa8.64□□□□□ -1.03
PDZRN3-206ENST00000477434 ADH1BP00325 375 aa8.64□□□□□ -1.03
PDZRN3-206ENST00000477434 GGCXP38435 758 aa8.64□□□□□ -1.03
PDZRN3-206ENST00000477434 DIXDC1Q155Q3 683 aa8.63□□□□□ -1.03
PDZRN3-206ENST00000477434 PPP1R18Q6NYC8 613 aa8.63□□□□□ -1.03
PDZRN3-206ENST00000477434 SPIRE2Q8WWL2 714 aa8.63□□□□□ -1.03
PDZRN3-206ENST00000477434 THAP11Q96EK4 314 aa8.63□□□□□ -1.03
PDZRN3-206ENST00000477434 SPSB2Q99619 263 aa8.63□□□□□ -1.03
PDZRN3-206ENST00000477434 FMNL1O95466 1100 aaPredicted RBP8.62□□□□□ -1.03
PDZRN3-206ENST00000477434 Q3C1V9 767 aa8.62□□□□□ -1.03
PDZRN3-206ENST00000477434 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.62□□□□□ -1.03
PDZRN3-206ENST00000477434 BRICD5Q6PL45 260 aa8.61□□□□□ -1.03
PDZRN3-206ENST00000477434 HLA-CQ95604 372 aa8.6□□□□□ -1.03
PDZRN3-206ENST00000477434 SLC6A16Q9GZN6 736 aa8.6□□□□□ -1.03
PDZRN3-206ENST00000477434 S1PR4O95977 384 aa8.59□□□□□ -1.03
PDZRN3-206ENST00000477434 RNF19BQ6ZMZ0 732 aa8.59□□□□□ -1.03
PDZRN3-206ENST00000477434 TBC1D2Q9BYX2 928 aa8.59□□□□□ -1.03
PDZRN3-206ENST00000477434 FDX1P10109 184 aa8.58□□□□□ -1.04
PDZRN3-206ENST00000477434 KDM4CQ9H3R0 1056 aa8.58□□□□□ -1.04
PDZRN3-206ENST00000477434 GPBP1L1Q9HC44 474 aaPredicted RBP8.58□□□□□ -1.04
PDZRN3-206ENST00000477434 MOXD2PA6NHM9 499 aa8.57□□□□□ -1.04
PDZRN3-206ENST00000477434 RNF223E7ERA6 249 aa8.57□□□□□ -1.04
PDZRN3-206ENST00000477434 GJA5P36382 358 aa8.57□□□□□ -1.04
PDZRN3-206ENST00000477434 GUCA2AQ02747 115 aa8.57□□□□□ -1.04
PDZRN3-206ENST00000477434 MSS51Q4VC12 460 aa8.57□□□□□ -1.04
PDZRN3-206ENST00000477434 NDUFV2P19404 249 aa8.56□□□□□ -1.04
PDZRN3-206ENST00000477434 FAM160A2Q8N612 972 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms