RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 MADDQ8WXG6 1647 aa22.39■■□□□ 1.18
TMEM53-208ENST00000476724 NEURL4Q96JN8 1562 aa22.39■■□□□ 1.17
TMEM53-208ENST00000476724 AGLP35573 1532 aa22.38■■□□□ 1.17
TMEM53-208ENST00000476724 NOS1P29475 1434 aa22.36■■□□□ 1.17
TMEM53-208ENST00000476724 SYNMO15061 1565 aa22.36■■□□□ 1.17
TMEM53-208ENST00000476724 IFT172Q9UG01 1749 aa22.35■■□□□ 1.17
TMEM53-208ENST00000476724 ARHGAP31Q2M1Z3 1444 aa22.35■■□□□ 1.17
TMEM53-208ENST00000476724 ADGRB3O60242 1522 aa22.34■■□□□ 1.17
TMEM53-208ENST00000476724 RALBP1Q15311 655 aa22.34■■□□□ 1.17
TMEM53-208ENST00000476724 PIK3C2BO00750 1634 aa22.32■■□□□ 1.16
TMEM53-208ENST00000476724 PREX1Q8TCU6 1659 aa22.32■■□□□ 1.16
TMEM53-208ENST00000476724 CLTCQ00610 1675 aaKnown RBP22.31■■□□□ 1.16
TMEM53-208ENST00000476724 CHGAP10645 457 aaKnown RBP22.3■■□□□ 1.16
TMEM53-208ENST00000476724 TRHP20396 242 aaPredicted RBP22.3■■□□□ 1.16
TMEM53-208ENST00000476724 MLECQ14165 292 aa22.3■■□□□ 1.16
TMEM53-208ENST00000476724 MYT1Q01538 1121 aa22.29■■□□□ 1.16
TMEM53-208ENST00000476724 STAC3Q96MF2 364 aa22.29■■□□□ 1.16
TMEM53-208ENST00000476724 BRD4O60885 1362 aaPredicted RBP22.29■■□□□ 1.16
TMEM53-208ENST00000476724 TMC1Q8TDI8 760 aa22.29■■□□□ 1.16
TMEM53-208ENST00000476724 PNISRQ8TF01 805 aaKnown RBP22.28■■□□□ 1.16
TMEM53-208ENST00000476724 MYBBP1AQ9BQG0 1328 aaKnown RBP22.28■■□□□ 1.16
TMEM53-208ENST00000476724 MYOM2P54296 1465 aa22.27■■□□□ 1.16
TMEM53-208ENST00000476724 PPLO60437 1756 aa22.26■■□□□ 1.15
TMEM53-208ENST00000476724 ADGRF5Q8IZF2 1346 aa22.26■■□□□ 1.15
TMEM53-208ENST00000476724 SMG6Q86US8 1419 aaKnown RBP22.26■■□□□ 1.15
TMEM53-208ENST00000476724 FBXO31Q5XUX0 539 aaPredicted RBP22.25■■□□□ 1.15
TMEM53-208ENST00000476724 PPP4R2Q9NY27 417 aa22.24■■□□□ 1.15
TMEM53-208ENST00000476724 DNAJC5Q9H3Z4 198 aa22.24■■□□□ 1.15
TMEM53-208ENST00000476724 KIAA1210Q9ULL0 1709 aa22.23■■□□□ 1.15
TMEM53-208ENST00000476724 MYO5BQ9ULV0 1848 aa22.23■■□□□ 1.15
TMEM53-208ENST00000476724 IQGAP1P46940 1657 aa22.23■■□□□ 1.15
TMEM53-208ENST00000476724 IDI1Q13907 227 aa22.22■■□□□ 1.15
TMEM53-208ENST00000476724 PPP6R1Q9UPN7 881 aa22.22■■□□□ 1.15
TMEM53-208ENST00000476724 LRPPRCP42704 1394 aaKnown RBP22.22■■□□□ 1.15
TMEM53-208ENST00000476724 CNGB1Q14028 1251 aaPredicted RBP22.21■■□□□ 1.15
TMEM53-208ENST00000476724 TESK2Q96S53 571 aa22.21■■□□□ 1.15
TMEM53-208ENST00000476724 NRXN1Q9ULB1 1477 aa22.21■■□□□ 1.15
TMEM53-208ENST00000476724 ERVK-7P63135 1459 aa22.21■■□□□ 1.15
TMEM53-208ENST00000476724 IRX6P78412 446 aaPredicted RBP22.19■■□□□ 1.14
TMEM53-208ENST00000476724 PARD3Q8TEW0 1356 aa22.19■■□□□ 1.14
TMEM53-208ENST00000476724 TMF1P82094 1093 aa22.19■■□□□ 1.14
TMEM53-208ENST00000476724 CFAP70Q5T0N1 1121 aa22.19■■□□□ 1.14
TMEM53-208ENST00000476724 NUDCQ9Y266 331 aa22.19■■□□□ 1.14
TMEM53-208ENST00000476724 PER1O15534 1290 aaPredicted RBP22.18■■□□□ 1.14
TMEM53-208ENST00000476724 NLRP13Q86W25 1043 aa22.17■■□□□ 1.14
TMEM53-208ENST00000476724 TMEM131LA2VDJ0 1609 aa22.17■■□□□ 1.14
TMEM53-208ENST00000476724 NEXMIFQ5QGS0 1516 aa22.17■■□□□ 1.14
TMEM53-208ENST00000476724 SLC52A1Q9NWF4 448 aa22.16■■□□□ 1.14
TMEM53-208ENST00000476724 NUTM2DQ5VT03 806 aaPredicted RBP22.15■■□□□ 1.14
TMEM53-208ENST00000476724 SCAF11Q99590 1463 aaKnown RBP22.14■■□□□ 1.14
TMEM53-208ENST00000476724 RPGRIP1LQ68CZ1 1315 aa22.14■■□□□ 1.14
TMEM53-208ENST00000476724 DISP3Q9P2K9 1392 aa22.14■■□□□ 1.14
TMEM53-208ENST00000476724 SPATA31D1Q6ZQQ2 1576 aa22.14■■□□□ 1.13
TMEM53-208ENST00000476724 PIK3C2GO75747 1445 aa22.13■■□□□ 1.13
TMEM53-208ENST00000476724 RBM19Q9Y4C8 960 aaKnown RBP22.11■■□□□ 1.13
TMEM53-208ENST00000476724 RNF123Q5XPI4 1314 aa22.11■■□□□ 1.13
TMEM53-208ENST00000476724 ZMYM3Q14202 1370 aa22.11■■□□□ 1.13
TMEM53-208ENST00000476724 INSRP06213 1382 aa22.1■■□□□ 1.13
TMEM53-208ENST00000476724 ESF1Q9H501 851 aaKnown RBP22.09■■□□□ 1.13
TMEM53-208ENST00000476724 CDCA8Q53HL2 280 aa22.08■■□□□ 1.13
TMEM53-208ENST00000476724 PANK3Q9H999 370 aa22.08■■□□□ 1.12
TMEM53-208ENST00000476724 SETBP1Q9Y6X0 1596 aa22.07■■□□□ 1.12
TMEM53-208ENST00000476724 C14orf93Q9H972 538 aaKnown RBP22.07■■□□□ 1.12
TMEM53-208ENST00000476724 ADGRB1O14514 1584 aa22.05■■□□□ 1.12
TMEM53-208ENST00000476724 VGFO15240 615 aaPredicted RBP22.05■■□□□ 1.12
TMEM53-208ENST00000476724 SLC24A1O60721 1099 aa22.04■■□□□ 1.12
TMEM53-208ENST00000476724 PDE3BQ13370 1112 aa22.03■■□□□ 1.12
TMEM53-208ENST00000476724 SENP3Q9H4L4 574 aaPredicted RBP22.03■■□□□ 1.12
TMEM53-208ENST00000476724 TMEM132EQ6IEE7 984 aa22.02■■□□□ 1.12
TMEM53-208ENST00000476724 EIF3AQ14152 1382 aaKnown RBP22.02■■□□□ 1.12
TMEM53-208ENST00000476724 STAG3Q9UJ98 1225 aa22.02■■□□□ 1.11
TMEM53-208ENST00000476724 ZFYVE9O95405 1425 aa22.01■■□□□ 1.11
TMEM53-208ENST00000476724 A2ML1A8K2U0 1454 aa22.01■■□□□ 1.11
TMEM53-208ENST00000476724 MYO3AQ8NEV4 1616 aa22■■□□□ 1.11
TMEM53-208ENST00000476724 CC2D1BQ5T0F9 858 aaKnown RBP21.99■■□□□ 1.11
TMEM53-208ENST00000476724 B4GALNT3Q6L9W6 998 aa21.97■■□□□ 1.11
TMEM53-208ENST00000476724 TRAK1Q9UPV9 953 aa21.97■■□□□ 1.11
TMEM53-208ENST00000476724 FER1L4A9Z1Z3 1794 aa21.97■■□□□ 1.11
TMEM53-208ENST00000476724 ASXL1Q8IXJ9 1541 aa21.96■■□□□ 1.11
TMEM53-208ENST00000476724 CEBPAP49715 358 aaPredicted RBP21.95■■□□□ 1.11
TMEM53-208ENST00000476724 KNSTRNQ9Y448 316 aa21.95■■□□□ 1.11
TMEM53-208ENST00000476724 TNRQ92752 1358 aa21.95■■□□□ 1.1
TMEM53-208ENST00000476724 C3P01024 1663 aa21.95■■□□□ 1.1
TMEM53-208ENST00000476724 BLMP54132 1417 aaPredicted RBP21.94■■□□□ 1.1
TMEM53-208ENST00000476724 ARHGEF28Q8N1W1 1705 aaKnown RBP21.93■■□□□ 1.1
TMEM53-208ENST00000476724 QRICH2Q9H0J4 1663 aa21.93■■□□□ 1.1
TMEM53-208ENST00000476724 RIMS2Q9UQ26 1411 aa21.93■■□□□ 1.1
TMEM53-208ENST00000476724 MYOM1P52179 1685 aa21.92■■□□□ 1.1
TMEM53-208ENST00000476724 NPC1L1Q9UHC9 1359 aa21.91■■□□□ 1.1
TMEM53-208ENST00000476724 KDM5AP29375 1690 aaKnown RBP21.91■■□□□ 1.1
TMEM53-208ENST00000476724 CENPJQ9HC77 1338 aaPredicted RBP21.91■■□□□ 1.1
TMEM53-208ENST00000476724 UBR1Q8IWV7 1749 aa21.9■■□□□ 1.1
TMEM53-208ENST00000476724 ALKQ9UM73 1620 aa21.9■■□□□ 1.1
TMEM53-208ENST00000476724 FANCIQ9NVI1 1328 aa21.89■■□□□ 1.1
TMEM53-208ENST00000476724 PLPPR3Q6T4P5 718 aa21.89■■□□□ 1.09
TMEM53-208ENST00000476724 AMER1Q5JTC6 1135 aaPredicted RBP21.88■■□□□ 1.09
TMEM53-208ENST00000476724 SBNO2Q9Y2G9 1366 aa21.88■■□□□ 1.09
TMEM53-208ENST00000476724 ANP32EQ9BTT0 268 aa21.87■■□□□ 1.09
TMEM53-208ENST00000476724 CCDC136Q96JN2 1154 aa21.87■■□□□ 1.09
TMEM53-208ENST00000476724 RCAN3Q9UKA8 241 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms