RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 PRDM2Q13029 1718 aa10.55□□□□□ -0.72
LRCH3-215ENST00000476664 CLK2P49760 499 aaKnown RBP10.54□□□□□ -0.72
LRCH3-215ENST00000476664 GDPD2Q9HCC8 539 aa10.54□□□□□ -0.72
LRCH3-215ENST00000476664 MYSM1Q5VVJ2 828 aa10.53□□□□□ -0.72
LRCH3-215ENST00000476664 SND1Q7KZF4 910 aaKnown RBP eCLIP10.53□□□□□ -0.72
LRCH3-215ENST00000476664 PLPP6Q8IY26 295 aa10.53□□□□□ -0.72
LRCH3-215ENST00000476664 DIP2BQ9P265 1576 aa10.52□□□□□ -0.72
LRCH3-215ENST00000476664 DIXDC1Q155Q3 683 aa10.52□□□□□ -0.73
LRCH3-215ENST00000476664 DDX12PQ92771 950 aa10.52□□□□□ -0.73
LRCH3-215ENST00000476664 TMEM106CQ9BVX2 250 aa10.52□□□□□ -0.73
LRCH3-215ENST00000476664 TTBK1Q5TCY1 1321 aaPredicted RBP10.52□□□□□ -0.73
LRCH3-215ENST00000476664 ABL2P42684 1182 aa10.5□□□□□ -0.73
LRCH3-215ENST00000476664 IVNS1ABPQ9Y6Y0 642 aa10.5□□□□□ -0.73
LRCH3-215ENST00000476664 FAM217BQ9NTX9 383 aaPredicted RBP10.49□□□□□ -0.73
LRCH3-215ENST00000476664 TDRD9Q8NDG6 1382 aaKnown RBP10.48□□□□□ -0.73
LRCH3-215ENST00000476664 WIZO95785 1651 aa10.47□□□□□ -0.73
LRCH3-215ENST00000476664 PPP2R2DQ66LE6 453 aa10.47□□□□□ -0.73
LRCH3-215ENST00000476664 MTMR14Q8NCE2 650 aa10.47□□□□□ -0.73
LRCH3-215ENST00000476664 MAGI1Q96QZ7 1491 aaPredicted RBP10.47□□□□□ -0.73
LRCH3-215ENST00000476664 ABCC8Q09428 1581 aa10.47□□□□□ -0.73
LRCH3-215ENST00000476664 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.46□□□□□ -0.73
LRCH3-215ENST00000476664 DNMBPQ6XZF7 1577 aa10.46□□□□□ -0.74
LRCH3-215ENST00000476664 POM121CA8CG34 1229 aa10.45□□□□□ -0.74
LRCH3-215ENST00000476664 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.44□□□□□ -0.74
LRCH3-215ENST00000476664 CERKQ8TCT0 537 aa10.44□□□□□ -0.74
LRCH3-215ENST00000476664 MAPKBP1O60336 1514 aa10.43□□□□□ -0.74
LRCH3-215ENST00000476664 MICALL2Q8IY33 904 aa10.43□□□□□ -0.74
LRCH3-215ENST00000476664 CEP170Q5SW79 1584 aa10.43□□□□□ -0.74
LRCH3-215ENST00000476664 RFX1P22670 979 aa10.42□□□□□ -0.74
LRCH3-215ENST00000476664 PRIM1P49642 420 aaKnown RBP10.42□□□□□ -0.74
LRCH3-215ENST00000476664 UPF1Q92900 1129 aaKnown RBP eCLIP10.42□□□□□ -0.74
LRCH3-215ENST00000476664 PHOX2BQ99453 314 aa10.42□□□□□ -0.74
LRCH3-215ENST00000476664 TBC1D2Q9BYX2 928 aa10.42□□□□□ -0.74
LRCH3-215ENST00000476664 POLA1P09884 1462 aaPredicted RBP10.42□□□□□ -0.74
LRCH3-215ENST00000476664 RAD54L2Q9Y4B4 1467 aa10.42□□□□□ -0.74
LRCH3-215ENST00000476664 TOP2BQ02880 1626 aa10.41□□□□□ -0.74
LRCH3-215ENST00000476664 VRTNQ9H8Y1 702 aa10.4□□□□□ -0.74
LRCH3-215ENST00000476664 OATP04181 439 aa10.39□□□□□ -0.75
LRCH3-215ENST00000476664 PRKAR2AP13861 404 aaKnown RBP10.39□□□□□ -0.75
LRCH3-215ENST00000476664 CFAP70Q5T0N1 1121 aa10.39□□□□□ -0.75
LRCH3-215ENST00000476664 HDGFL1Q5TGJ6 251 aa10.39□□□□□ -0.75
LRCH3-215ENST00000476664 TBC1D2BQ9UPU7 963 aa10.39□□□□□ -0.75
LRCH3-215ENST00000476664 RBM47A0AV96 593 aaKnown RBP10.38□□□□□ -0.75
LRCH3-215ENST00000476664 C2orf72A6NCS6 295 aa10.38□□□□□ -0.75
LRCH3-215ENST00000476664 SRPK2P78362 688 aaKnown RBP10.38□□□□□ -0.75
LRCH3-215ENST00000476664 TUSC1Q2TAM9 212 aa10.38□□□□□ -0.75
LRCH3-215ENST00000476664 B4GALNT3Q6L9W6 998 aa10.38□□□□□ -0.75
LRCH3-215ENST00000476664 WDR97A6NE52 1622 aa10.37□□□□□ -0.75
LRCH3-215ENST00000476664 WASHC4Q2M389 1173 aa10.37□□□□□ -0.75
LRCH3-215ENST00000476664 NPDC1Q9NQX5 325 aaPredicted RBP10.37□□□□□ -0.75
LRCH3-215ENST00000476664 GRIN2BQ13224 1484 aa10.36□□□□□ -0.75
LRCH3-215ENST00000476664 KIF3CO14782 793 aa10.36□□□□□ -0.75
LRCH3-215ENST00000476664 EVI5O60447 810 aa10.36□□□□□ -0.75
LRCH3-215ENST00000476664 LIMD1Q9UGP4 676 aa10.36□□□□□ -0.75
LRCH3-215ENST00000476664 SOGA1O94964 1423 aa10.35□□□□□ -0.75
LRCH3-215ENST00000476664 UNCXA6NJT0 531 aa10.35□□□□□ -0.75
LRCH3-215ENST00000476664 RIC3Q7Z5B4 369 aa10.35□□□□□ -0.75
LRCH3-215ENST00000476664 METTL3Q86U44 580 aaKnown RBP10.35□□□□□ -0.75
LRCH3-215ENST00000476664 PPP1R12CQ9BZL4 782 aa10.35□□□□□ -0.75
LRCH3-215ENST00000476664 IGSF5Q9NSI5 407 aa10.35□□□□□ -0.75
LRCH3-215ENST00000476664 GNEQ9Y223 722 aaKnown RBP10.35□□□□□ -0.75
LRCH3-215ENST00000476664 SHROOM2Q13796 1616 aa10.34□□□□□ -0.75
LRCH3-215ENST00000476664 ERCC3P19447 782 aa10.34□□□□□ -0.75
LRCH3-215ENST00000476664 EN1Q05925 392 aaPredicted RBP10.34□□□□□ -0.75
LRCH3-215ENST00000476664 CDHR5Q9HBB8 845 aa10.34□□□□□ -0.75
LRCH3-215ENST00000476664 COL17A1Q9UMD9 1497 aaPredicted RBP10.34□□□□□ -0.75
LRCH3-215ENST00000476664 PPRC1Q5VV67 1664 aaKnown RBP10.34□□□□□ -0.75
LRCH3-215ENST00000476664 EIF5BO60841 1220 aaKnown RBP10.33□□□□□ -0.76
LRCH3-215ENST00000476664 FBXO31Q5XUX0 539 aaPredicted RBP10.33□□□□□ -0.76
LRCH3-215ENST00000476664 NDUFB9Q9Y6M9 179 aa10.33□□□□□ -0.76
LRCH3-215ENST00000476664 MAP3K7O43318 606 aa10.32□□□□□ -0.76
LRCH3-215ENST00000476664 FAM177A1Q8N128 213 aaPredicted RBP10.32□□□□□ -0.76
LRCH3-215ENST00000476664 EPAS1Q99814 870 aa10.32□□□□□ -0.76
LRCH3-215ENST00000476664 CARNS1A5YM72 827 aa10.31□□□□□ -0.76
LRCH3-215ENST00000476664 ATG7O95352 703 aa10.31□□□□□ -0.76
LRCH3-215ENST00000476664 ZRANB1Q9UGI0 708 aa10.31□□□□□ -0.76
LRCH3-215ENST00000476664 PBRM1Q86U86 1689 aa10.31□□□□□ -0.76
LRCH3-215ENST00000476664 AP1G2O75843 785 aa10.3□□□□□ -0.76
LRCH3-215ENST00000476664 ADAMTS19Q8TE59 1207 aa10.3□□□□□ -0.76
LRCH3-215ENST00000476664 PCF11O94913 1555 aaKnown RBP10.3□□□□□ -0.76
LRCH3-215ENST00000476664 TMEM88BA6NKF7 163 aa10.29□□□□□ -0.76
LRCH3-215ENST00000476664 DPY19L2Q6NUT2 758 aa10.29□□□□□ -0.76
LRCH3-215ENST00000476664 ZNF710Q8N1W2 664 aa10.29□□□□□ -0.76
LRCH3-215ENST00000476664 ADCY10Q96PN6 1610 aa10.29□□□□□ -0.76
LRCH3-215ENST00000476664 PALM3A6NDB9 673 aaPredicted RBP10.28□□□□□ -0.76
LRCH3-215ENST00000476664 G3V3G9 751 aa10.28□□□□□ -0.76
LRCH3-215ENST00000476664 SPTLC1O15269 473 aa10.28□□□□□ -0.76
LRCH3-215ENST00000476664 CANXP27824 592 aaKnown RBP10.28□□□□□ -0.76
LRCH3-215ENST00000476664 LMOD1P29536 600 aaPredicted RBP10.28□□□□□ -0.76
LRCH3-215ENST00000476664 CCER1Q8TC90 406 aaPredicted RBP10.28□□□□□ -0.76
LRCH3-215ENST00000476664 PXYLP1Q8TE99 480 aa10.28□□□□□ -0.76
LRCH3-215ENST00000476664 PHF14O94880 888 aa10.27□□□□□ -0.77
LRCH3-215ENST00000476664 USP17L8P0C7I0 530 aa10.27□□□□□ -0.77
LRCH3-215ENST00000476664 TIE1P35590 1138 aa10.27□□□□□ -0.77
LRCH3-215ENST00000476664 PHF12Q96QT6 1004 aa10.27□□□□□ -0.77
LRCH3-215ENST00000476664 CACNB1Q02641 598 aaPredicted RBP10.26□□□□□ -0.77
LRCH3-215ENST00000476664 CCDC125Q86Z20 511 aa10.26□□□□□ -0.77
LRCH3-215ENST00000476664 SPIRE2Q8WWL2 714 aa10.26□□□□□ -0.77
LRCH3-215ENST00000476664 NLRP7Q8WX94 980 aa10.26□□□□□ -0.77
LRCH3-215ENST00000476664 MRRFQ96E11 262 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms