RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 YY1P25490 414 aa10.69□□□□□ -0.7
CLDN4-205ENST00000476494 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.69□□□□□ -0.7
CLDN4-205ENST00000476494 PIK3C2BO00750 1634 aa10.68□□□□□ -0.7
CLDN4-205ENST00000476494 MROH1Q8NDA8 1641 aa10.68□□□□□ -0.7
CLDN4-205ENST00000476494 DEFB132Q7Z7B7 95 aa10.67□□□□□ -0.7
CLDN4-205ENST00000476494 ATRNO75882 1429 aa10.67□□□□□ -0.7
CLDN4-205ENST00000476494 EEA1Q15075 1411 aa10.67□□□□□ -0.7
CLDN4-205ENST00000476494 CADPS2Q86UW7 1296 aa10.66□□□□□ -0.7
CLDN4-205ENST00000476494 FNBP4Q8N3X1 1017 aaPredicted RBP10.66□□□□□ -0.7
CLDN4-205ENST00000476494 BLMP54132 1417 aaPredicted RBP10.66□□□□□ -0.7
CLDN4-205ENST00000476494 PNPLA6Q8IY17 1366 aa10.65□□□□□ -0.7
CLDN4-205ENST00000476494 CCNB3Q8WWL7 1395 aa10.65□□□□□ -0.7
CLDN4-205ENST00000476494 C19orf44Q9H6X5 657 aa10.65□□□□□ -0.7
CLDN4-205ENST00000476494 ARHGAP31Q2M1Z3 1444 aa10.65□□□□□ -0.7
CLDN4-205ENST00000476494 CHIC1Q5VXU3 224 aa10.64□□□□□ -0.71
CLDN4-205ENST00000476494 LRRC59Q96AG4 307 aaKnown RBP10.64□□□□□ -0.71
CLDN4-205ENST00000476494 TRPC5Q9UL62 973 aaPredicted RBP10.64□□□□□ -0.71
CLDN4-205ENST00000476494 CEP152O94986 1710 aa10.64□□□□□ -0.71
CLDN4-205ENST00000476494 IDI1Q13907 227 aa10.63□□□□□ -0.71
CLDN4-205ENST00000476494 USP21Q9UK80 565 aa10.63□□□□□ -0.71
CLDN4-205ENST00000476494 EFCAB6Q5THR3 1501 aa10.63□□□□□ -0.71
CLDN4-205ENST00000476494 ASXL1Q8IXJ9 1541 aa10.62□□□□□ -0.71
CLDN4-205ENST00000476494 CCDC141Q6ZP82 1450 aa10.61□□□□□ -0.71
CLDN4-205ENST00000476494 PSDA5PKW4 1024 aaPredicted RBP10.61□□□□□ -0.71
CLDN4-205ENST00000476494 ADAMTS2O95450 1211 aa10.6□□□□□ -0.71
CLDN4-205ENST00000476494 ATF3P18847 181 aa10.6□□□□□ -0.71
CLDN4-205ENST00000476494 RSPH4AQ5TD94 716 aa10.59□□□□□ -0.71
CLDN4-205ENST00000476494 DDX17Q92841 729 aaKnown RBP10.59□□□□□ -0.71
CLDN4-205ENST00000476494 TBX22Q9Y458 520 aa10.58□□□□□ -0.72
CLDN4-205ENST00000476494 BRWD3Q6RI45 1802 aa10.58□□□□□ -0.72
CLDN4-205ENST00000476494 EIF2AK4Q9P2K8 1649 aaKnown RBP10.58□□□□□ -0.72
CLDN4-205ENST00000476494 FYCO1Q9BQS8 1478 aa10.57□□□□□ -0.72
CLDN4-205ENST00000476494 ZFYVE9O95405 1425 aa10.57□□□□□ -0.72
CLDN4-205ENST00000476494 MST1RQ04912 1400 aa10.57□□□□□ -0.72
CLDN4-205ENST00000476494 PLEKHG1Q9ULL1 1385 aa10.56□□□□□ -0.72
CLDN4-205ENST00000476494 UBTFP17480 764 aaKnown RBP10.56□□□□□ -0.72
CLDN4-205ENST00000476494 GJD4Q96KN9 370 aaPredicted RBP10.56□□□□□ -0.72
CLDN4-205ENST00000476494 DCCP43146 1447 aa10.56□□□□□ -0.72
CLDN4-205ENST00000476494 PTCH1Q13635 1447 aa10.55□□□□□ -0.72
CLDN4-205ENST00000476494 UNC13BO14795 1591 aa10.55□□□□□ -0.72
CLDN4-205ENST00000476494 MTUS2Q5JR59 1369 aa10.54□□□□□ -0.72
CLDN4-205ENST00000476494 ARHGEF5Q12774 1597 aa10.54□□□□□ -0.72
CLDN4-205ENST00000476494 ADAMTS13Q76LX8 1427 aa10.54□□□□□ -0.72
CLDN4-205ENST00000476494 C14orf37Q86TY3 774 aa10.54□□□□□ -0.72
CLDN4-205ENST00000476494 STAG3Q9UJ98 1225 aa10.54□□□□□ -0.72
CLDN4-205ENST00000476494 CEP350Q5VT06 3117 aa10.54□□□□□ -0.72
CLDN4-205ENST00000476494 LAMC1P11047 1609 aa10.54□□□□□ -0.72
CLDN4-205ENST00000476494 SPHKAPQ2M3C7 1700 aa10.53□□□□□ -0.72
CLDN4-205ENST00000476494 SENP3-EIF4A1A0A087X0R7 540 aa10.53□□□□□ -0.72
CLDN4-205ENST00000476494 GLI3P10071 1580 aa10.52□□□□□ -0.72
CLDN4-205ENST00000476494 NOS1P29475 1434 aa10.52□□□□□ -0.73
CLDN4-205ENST00000476494 PTPRUQ92729 1446 aa10.52□□□□□ -0.73
CLDN4-205ENST00000476494 ZNF784Q8NCA9 323 aaPredicted RBP10.52□□□□□ -0.73
CLDN4-205ENST00000476494 ADGRB3O60242 1522 aa10.52□□□□□ -0.73
CLDN4-205ENST00000476494 SOS2Q07890 1332 aaPredicted RBP10.52□□□□□ -0.73
CLDN4-205ENST00000476494 PIK3R4Q99570 1358 aa10.51□□□□□ -0.73
CLDN4-205ENST00000476494 MYO5BQ9ULV0 1848 aa10.5□□□□□ -0.73
CLDN4-205ENST00000476494 TSPY4P0CV99 314 aa10.5□□□□□ -0.73
CLDN4-205ENST00000476494 TSPY10P0CW01 314 aa10.5□□□□□ -0.73
CLDN4-205ENST00000476494 C1QTNF8P60827 252 aa10.5□□□□□ -0.73
CLDN4-205ENST00000476494 R3HDM1Q15032 1099 aaKnown RBP10.5□□□□□ -0.73
CLDN4-205ENST00000476494 BCANQ96GW7 911 aa10.5□□□□□ -0.73
CLDN4-205ENST00000476494 EHMT2Q96KQ7 1210 aa10.5□□□□□ -0.73
CLDN4-205ENST00000476494 COL22A1Q8NFW1 1626 aaPredicted RBP10.5□□□□□ -0.73
CLDN4-205ENST00000476494 UTRNP46939 3433 aa10.5□□□□□ -0.73
CLDN4-205ENST00000476494 CEP162Q5TB80 1403 aa10.5□□□□□ -0.73
CLDN4-205ENST00000476494 RALGAPBQ86X10 1494 aa10.49□□□□□ -0.73
CLDN4-205ENST00000476494 ONECUT3O60422 494 aaPredicted RBP10.49□□□□□ -0.73
CLDN4-205ENST00000476494 SF3B2Q13435 895 aaKnown RBP10.49□□□□□ -0.73
CLDN4-205ENST00000476494 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.49□□□□□ -0.73
CLDN4-205ENST00000476494 MYOM2P54296 1465 aa10.49□□□□□ -0.73
CLDN4-205ENST00000476494 MARF1Q9Y4F3 1742 aaKnown RBP10.48□□□□□ -0.73
CLDN4-205ENST00000476494 PPP1R15AO75807 674 aaPredicted RBP10.48□□□□□ -0.73
CLDN4-205ENST00000476494 AMOTL2Q9Y2J4 779 aa10.48□□□□□ -0.73
CLDN4-205ENST00000476494 SLC52A1Q9NWF4 448 aa10.47□□□□□ -0.73
CLDN4-205ENST00000476494 RIMS2Q9UQ26 1411 aa10.47□□□□□ -0.73
CLDN4-205ENST00000476494 TRPM2O94759 1503 aa10.47□□□□□ -0.73
CLDN4-205ENST00000476494 LMTK2Q8IWU2 1503 aa10.46□□□□□ -0.74
CLDN4-205ENST00000476494 SLIT2O94813 1529 aa10.45□□□□□ -0.74
CLDN4-205ENST00000476494 EHBP1L1Q8N3D4 1523 aa10.45□□□□□ -0.74
CLDN4-205ENST00000476494 BAG6P46379 1132 aa10.45□□□□□ -0.74
CLDN4-205ENST00000476494 EN1Q05925 392 aaPredicted RBP10.45□□□□□ -0.74
CLDN4-205ENST00000476494 SEPT12Q8IYM1 358 aa10.45□□□□□ -0.74
CLDN4-205ENST00000476494 TMEM131LA2VDJ0 1609 aa10.44□□□□□ -0.74
CLDN4-205ENST00000476494 DUOX2Q9NRD8 1548 aa10.44□□□□□ -0.74
CLDN4-205ENST00000476494 UNC5CLQ8IV45 518 aa10.44□□□□□ -0.74
CLDN4-205ENST00000476494 XRN1Q8IZH2 1706 aaKnown RBP10.44□□□□□ -0.74
CLDN4-205ENST00000476494 C1orf167Q5SNV9 1468 aa10.43□□□□□ -0.74
CLDN4-205ENST00000476494 DISP2A7MBM2 1401 aa10.43□□□□□ -0.74
CLDN4-205ENST00000476494 CAMTA1Q9Y6Y1 1673 aa10.43□□□□□ -0.74
CLDN4-205ENST00000476494 KRT27Q7Z3Y8 459 aa10.42□□□□□ -0.74
CLDN4-205ENST00000476494 HDGFP51858 240 aaKnown RBP10.41□□□□□ -0.74
CLDN4-205ENST00000476494 ORAI2Q96SN7 254 aa10.41□□□□□ -0.74
CLDN4-205ENST00000476494 ADGRL3Q9HAR2 1447 aa10.41□□□□□ -0.74
CLDN4-205ENST00000476494 GCC2Q8IWJ2 1684 aa10.4□□□□□ -0.74
CLDN4-205ENST00000476494 NINLQ9Y2I6 1382 aa10.39□□□□□ -0.75
CLDN4-205ENST00000476494 NALCNQ8IZF0 1738 aa10.39□□□□□ -0.75
CLDN4-205ENST00000476494 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.39□□□□□ -0.75
CLDN4-205ENST00000476494 CAMKK2Q96RR4 588 aa10.39□□□□□ -0.75
CLDN4-205ENST00000476494 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms